Geospiza fortis (medium ground-finch): 102042503
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Entry
102042503 CDS
T03755
Symbol
DCAF5
Name
(RefSeq) DDB1 and CUL4 associated factor 5
KO
K11800
DDB1- and CUL4-associated factor 5
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gfr04121
]
102042503 (DCAF5)
Ubiquitin system [BR:
gfr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
102042503 (DCAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR75_1st
EIF3I
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_IFT122_1st
Beta-prop_EML
Beta-prop_HPS5
Beta-prop_Aladin
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
Beta-prop_WDR41
Beta-prop_Vps41
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
102042503
NCBI-ProteinID:
XP_005417587
LinkDB
All DBs
Position
Un
AA seq
904 aa
AA seq
DB search
MLAFTYVKCCLNCFAGGDDRRVLLWHMEEAIHSRVKPVQLKGEHHSNIFCLAFNSGNTKV
FSGGNDEQVILHDVESTETLDVFAHEDAVYGLSVSPVNDNIFASSSDDGRVLIWDIRESS
HGEPFCLAHYPSAFHSVMFNPVEPRLLATANSKEGVGLWDIRKPQSSLLRYGGNLSLQSA
MSVRFNSNGTQLLALRRRLPPVLYDIHCRLPVFQFDNQGYFNSCTMKSCCFAGDRDQYIL
SGSDDFNLYMWRIPPDPEAGGIGRVVNGAFMVLKGHRSIVNQVRFNPHTYMICSSGVEKI
IKIWSPYKQPDCTGDLDGRIEDDSRCLYTHEEYISLVLNSGSGLSHDYANQSVQEDPRMM
AFFDSLVRREIEGWSSDSDSDLSESTILQLHAGVSERSAYSESESSTSLHHSPPHVAEES
EETAYNLRALRSTASPSAREDMASRQQRLSALRKYQDKRLLALSNESDSDDNTCEAELDT
DLFPRPPSPSPEENESSSSSSSSTEDEEELNERRTLMRQRNALRRRQKVQKEERTSTNTE
SVTPYIGEDIYDYPQIKVDDLSSSPASSPERNSANKEVLKERTSPCSDSESVERKIYKAY
KWLHYSYISYSASKDGESSRGDGESDEGKPGTSGRHSATCSLTKEDARKSSSVVPQGSSA
LSAENHKRENLKECGGIENSSNGQAHECDNQRWMEGHENTSEDTSSGGVEHSFETKKLNG
KANCKGLNSCSEEPCIQTTGLVEQKNSQNCQPAPSHHSLVPPFSPVAICSMSGHCSRNQT
DGSEERSLDPSCVNHNNNGHLHLHPSCFNNGQSFGEQESVTQGLQVHSNADNGNLVQVGV
TLHRDCCLSEMDSNSYNVSTREDTADLHPVGSESTQSLGGLKRHRAELEDADSESSSLEK
KLKT
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgttggcgttcacctatgttaaatgttgcttaaattgttttgcaggaggggatgaccgc
cgagtcttgctttggcatatggaagaagccatccactcaagagtcaaaccagttcagcta
aaaggggagcatcactctaacatcttctgcctagcttttaacagtggcaatacgaaagtg
ttctctggaggcaatgatgaacaagttatactccatgatgttgaaagcactgagaccttg
gatgtgtttgcccatgaggatgcagtgtatggcctttcagtgagcccagtaaatgacaac
atctttgctagctcatcagatgacggccgggtcctgatctgggacatccgagagtcctcc
catggagagcccttctgcttggcacactacccatcagcctttcacagtgtgatgtttaat
ccagtagaacccagattactggctactgccaactctaaggaaggtgtgggactctgggat
attcgtaagcctcagagttccctgctccgctatggtgggaacctttcccttcagagcgcc
atgagcgtccggttcaacagcaacggcacgcagctgctggcgctgcggcggcgcctgccc
cccgtgctctacgacatccactgccgcctccccgtcttccagttcgacaaccagggctac
ttcaactcctgcaccatgaagagctgctgctttgcaggtgatcgtgatcagtacatcctt
tcgggctctgatgacttcaatttgtatatgtggaggattcctccagatccagaagctggt
ggcattggcagggttgtcaacggtgctttcatggtattgaaaggtcatcggtcaattgta
aaccaagtgaggtttaatcctcacacctacatgatttgttcttctggtgttgaaaagatt
atcaagatctggagtccttacaagcagcctgactgcacaggggacctggatggtagaatt
gaggatgactcgcgttgcctctacactcatgaagagtacatcagtctcgtgttgaacagt
ggtagtggtttgtcccacgattatgccaaccaatcggtccaggaagatccacggatgatg
gccttctttgactctctggtgcgccgggagattgagggctggagttctgattcagacagc
gacctcagcgagagcacaatcctgcagctccatgcaggagtgagtgaacgctctgcttac
agcgagtccgagtcctccacctctttgcatcactccccaccgcacgtggctgaagagtct
gaagaaactgcctataacttaagggccttaagatcaactgcatccccctcagccagggaa
gacatggcttcccgtcagcagaggctctctgcactgagaaagtatcaggacaaacgtctc
ctggccctttccaatgagtctgactctgatgacaatacctgtgaggcagaactagataca
gaccttttcccacggccaccatctccgagtcctgaggagaacgaatccagcagctccagc
agcagcagtacagaagatgaagaggagctgaacgaaaggcgcacattgatgaggcagcgc
aatgcactgaggcgccgacagaaggtgcaaaaggaggaaaggactagcactaacacggag
agtgtaaccccttacataggtgaggacatatatgattaccctcagatcaaagtagatgat
ctttcttcctctccagcttcttccccagaaaggaattcagccaacaaagaagttcttaaa
gaaaggacgtccccttgttcagacagtgaatcagtggagagaaagatttacaaagcttac
aaatggctccattattcttacatatcatattcagctagtaaagatggtgaatcctccaga
ggagatggagaaagtgatgaagggaaaccaggaaccagtggaaggcacagtgcaacatgc
tcgctaactaaggaagatgctaggaagtcaagttcagtagttcctcagggttcctcagct
ctttctgctgaaaaccacaagagagaaaatttaaaagaatgtggtgggatagaaaattct
agtaatggtcaagctcatgaatgtgacaatcagcggtggatggagggtcatgaaaacaca
tcggaagacacaagcagtggaggtgtagagcattcttttgagactaaaaagctcaatggt
aaagctaactgcaaagggctaaatagctgttccgaagaaccttgtattcagaccacagga
cttgtggaacagaaaaatagtcagaactgtcaaccagcaccaagccatcactcactggtc
cctccattctcccctgttgccatctgtagcatgtcaggtcactgctccaggaaccagact
gatggcagtgaggagaggagcttggacccctcctgcgttaaccacaataataatggccac
ttgcatcttcacccttcatgcttcaacaacggacagagttttggagagcaggagtccgtg
actcaaggactacaggtgcactcaaatgctgataatggcaaccttgtacaggtgggtgtg
accttgcacagagactgctgcctgtctgaaatggactccaacagctacaatgtgagcaca
agagaggatactgctgacctgcatcctgtgggcagtgagagcactcaatctcttggagga
ctgaaaagacacagagcggagttggaagatgcagattcagagagttcatccttagaaaag
aagttaaaaacatga
DBGET
integrated database retrieval system
