Geospiza fortis (medium ground-finch): 102042512
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Entry
102042512 CDS
T03755
Symbol
FUBP3
Name
(RefSeq) far upstream element binding protein 3
KO
K13210
far upstream element-binding protein
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gfr03019
]
102042512 (FUBP3)
03041 Spliceosome [BR:
gfr03041
]
102042512 (FUBP3)
Messenger RNA biogenesis [BR:
gfr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
102042512 (FUBP3)
Spliceosome [BR:
gfr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
102042512 (FUBP3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_NusA_2nd
FUBP_C
KH_KHD4_2nd
CG7065_mid
KH_PNO1_2nd
Motif
Other DBs
NCBI-GeneID:
102042512
NCBI-ProteinID:
XP_005421343
UniProt:
A0A6I9HIS5
LinkDB
All DBs
Position
Un
AA seq
458 aa
AA seq
DB search
MVGFIIGRGGEQISRIQIESGCKIQIAPDSGGMPERPCVLTGTPESIEQAKRLLGQIVDR
CRNGPGFHNDVDGNSTIQEILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQDGPLPTG
ADKPLRITGDAFKVQQAREMVLEIIREKDQADFRGVRSDFSARMGGGSIEVSVPRYAVGI
VIGRNGEMIKKIQNDAGVRIQFKPDDGISAERVAQVMGLPDRCQHAAHIISELILTAQER
DGFGNLAVARGRGRGRGDWSVGAPGGVQEITYTVPADKCGLVIGKGGENIKSINQQSGAH
VELQRNPPPNTDPGVRIFTIRGVPQQIELARHLIDEKVGGTSMGGPGGFGQSPFSQAPAT
PHQNGPQAFMTQGWGSTYQTWQQPGQQVPSQQSQQQNSHPDYSKAWEEYFKKQSHAASAA
SQASSQPDYTMAWAEYYRQQAAYYGQTLGQAQAHSQEQ
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggttggatttataatcggcaggggaggagaacagatctcacggatccagatagagtct
ggctgcaaaattcaaattgctccagacagtggtgggatgcccgagaggccctgtgtactc
actgggacaccagagagcattgaacaagcaaaacggcttctggggcagattgtagatcgc
tgtcgcaacggacctggttttcacaacgatgttgatggcaacagtaccattcaggagatt
ttgatcccggcatccaaagtgggtctagtcatcggcaaaggaggtgaaacaataaaacag
ttgcaggagcgaacaggtgtgaaaatgattatgatccaagatggtcctttgcccactgga
gcagataaacctctccgtattactggagatgcatttaaagtacagcaagcgagggaaatg
gtactggagatcatccgagagaaagatcaggcagacttccgaggcgtgcgcagtgatttc
agtgctagaatgggaggaggcagcatagaggtctctgtgcccaggtatgctgttggaatt
gtgataggaagaaatggagaaatgatcaaaaagattcagaatgatgctggagttaggatt
caatttaaaccagatgatgggattagcgctgaaagagtcgcgcaggtcatggggctcccg
gatcggtgtcagcacgcagcacacatcatcagtgagctcatcctcacggcacaggaacga
gatggctttgggaacttggctgttgccagaggaagaggtcgtggccgtggggactggagt
gttggagcacctgggggcgtgcaggaaatcacctacactgttccagctgacaagtgtggc
cttgttataggcaaaggtggtgagaacatcaagagcataaatcagcagtcaggagcacac
gtggagctgcagagaaacccacccccaaacacagaccctggtgtaagaatattcacaatc
agaggcgtcccccagcaaatcgagctcgctagacatctcatagatgagaaagttggtggt
accagcatgggtggacctggaggatttggtcaaagtcccttcagccaagcacctgctaca
cctcatcaaaatggtcctcaggcgttcatgacacagggctggggcagcacctaccagacg
tggcagcagcctggacagcaagtcccaagccaacagagccagcagcagaacagccatccc
gattacagcaaagcatgggaggagtatttcaaaaaacagagtcatgctgccagtgctgct
tctcaggcaagttcccagccagactacacgatggcttgggcagagtattaccgacagcag
gctgcctactatgggcagacactagggcaggctcaggcccacagccaggagcagtag
DBGET
integrated database retrieval system
