Geospiza fortis (medium ground-finch): 102042634
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Entry
102042634 CDS
T03755
Symbol
PIF1
Name
(RefSeq) PIF1 5'-to-3' DNA helicase
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gfr03032
]
102042634 (PIF1)
03029 Mitochondrial biogenesis [BR:
gfr03029
]
102042634 (PIF1)
Enzymes [BR:
gfr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
102042634 (PIF1)
DNA replication proteins [BR:
gfr03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
102042634 (PIF1)
Mitochondrial biogenesis [BR:
gfr03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
102042634 (PIF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PIF1
Pif1_2B_dom
AAA_30
UvrD_C_2
AAA_19
Herpes_Helicase
Motif
Other DBs
NCBI-GeneID:
102042634
NCBI-ProteinID:
XP_005423212
UniProt:
A0A6I9HJX5
LinkDB
All DBs
Position
Un
AA seq
379 aa
AA seq
DB search
HIGGTTLHAFAGIGSGKAPLEQCVQLAERPGVRQHWLACQHLIIDEISMVDGKFFDKLEA
VARAVRKRDEPFGGIQLIICGDFLQLPPVCKANEETKFCFQAKSWRKCIHINMELTEVRR
QTDKNFVSILSAIRLGRCTEEVTRQLMQTAAHKSERDGILATRLCTHKDDVEITNERRLQ
QLPGEVHVFEALDSDPMLVKLIDAQCPVGGRVELKLGAQVMLAKNLDVSQGLVNGARGVV
IGFESEQKGLPKVRFLCGVTQLIKMEKWVIKGPSGVHLSRQQLPLKLAWAISIHKSQGMS
LDCVEISLSRVFESGQAYVALSRARSLAGLRVLDFDPKAVRADPAVLHFYRHLRRHQLAA
KDSLHTHSDAEEKENWKCN
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
cacatcggtggcactactctccacgcctttgcagggatcggctctgggaaggcaccgctg
gaacagtgcgttcagctggcagagaggccaggggtgcgccagcactggctggcctgccag
cacttaattattgatgagatctcaatggtggatggcaagttctttgacaagctggaagca
gtggcaagggccgtcagaaaacgggatgagccttttggaggaattcagctaattatctgt
ggggatttcttacagctacccccagtctgcaaggctaacgaagaaaccaagttctgcttc
caggcaaaaagctggaggaaatgcatccatataaacatggagctgactgaagtgcggaga
cagactgacaagaactttgtctcaatcctgagtgcaatccgtttaggcaggtgcacagag
gaggttaccagacagctgatgcagacagctgctcacaagtctgagcgtgatgggatcctg
gctacaaggctgtgcacccataaagatgatgtggaaataaccaatgagagacgcttgcaa
cagcttccaggagaagtgcatgtgtttgaggctttggacagtgacccaatgctagtgaag
ttaattgatgctcagtgtcctgtgggtggtagagttgagctaaagcttggagcacaggtg
atgttagcaaagaatcttgatgtgtctcaagggctggtgaatggagcacgaggtgttgtt
atagggtttgaaagtgaacagaaggggctgcctaaggtgaggtttctctgtggggtcaca
cagctcataaaaatggagaaatgggtcatcaaaggaccatcaggagttcatctgagtcgt
cagcaattacctttaaaattggcatgggccatttccattcacaagagtcagggcatgtct
ctggactgtgtggagatctccctgtcccgtgtctttgagagtggccaggcctacgtagcc
ctgtcccgagcccgaagcctggcagggctccgtgtcctggattttgaccccaaagcagtg
agagctgatcctgctgtgctgcacttctacaggcacctgaggcgtcaccagcttgcagcc
aaggattcactacacacccattcagatgctgaggagaaagagaactggaaatgcaactga
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