Geospiza fortis (medium ground-finch): 102042701
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Entry
102042701 CDS
T03755
Symbol
RAD23B
Name
(RefSeq) RAD23 homolog B, nucleotide excision repair protein
KO
K10839
UV excision repair protein RAD23
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03420
Nucleotide excision repair
gfr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
102042701 (RAD23B)
09124 Replication and repair
03420 Nucleotide excision repair
102042701 (RAD23B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
gfr03051
]
102042701 (RAD23B)
03400 DNA repair and recombination proteins [BR:
gfr03400
]
102042701 (RAD23B)
Proteasome [BR:
gfr03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
102042701 (RAD23B)
DNA repair and recombination proteins [BR:
gfr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
102042701 (RAD23B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA
XPC-binding
UBA_7
UBA_3
UBA_2
CUE
DUF1421
UBA_9
Motif
Other DBs
NCBI-GeneID:
102042701
NCBI-ProteinID:
XP_005428092
UniProt:
A0A6I9HSJ4
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All DBs
Position
Un
AA seq
328 aa
AA seq
DB search
MVTKPKAAAGATQLSNATSTVGSTTAAPTAVAAPIPVPAPVPAPVPPPPAADAVACEPAP
VSAPKEEKTEEKPPEAPVAVSPSSIDSTTGDTSRSNLFEDAISALVTGQSYENMVTEIMS
MGYEREQVIAALRASFNNPDRAVEYLLMGIPGDNQAVADPPQPPSTGASQSSAVAAAVAT
IPTTTSSLGGHPLEFLRNQPQFQQMRQIIQQNPSLLPALLQQIGRENPQLLQQISQHQEH
FIHMLNEPVLESRQGLSGSDDGASTGGIGDAGNAHMNYIQVTPQEKEAIERLKALGFPEG
LVIQAYFACEKNENLAANFLLQQNFDED
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggtgacaaaacccaaagcagcagctggagcgactcagctgtcaaatgctacttccact
gttggctcaacaactgcagctcccacagcagttgctgcaccaatccctgttcctgcccct
gtgccagctcctgtccctccaccaccagcagcagatgcagttgcttgtgaaccagcacct
gtgagtgctccgaaagaggagaagacagaagaaaagccacctgaggcaccagttgctgtc
agtccatcatcaattgacagtacaacaggtgatacatctcgatcaaatctttttgaggat
gctataagtgcacttgtgaccggtcagtcctatgagaacatggtgactgagatcatgtcc
atgggctatgagcgggagcaggtgattgcagcactgagggccagcttcaacaaccctgac
agagcagtggaataccttctgatggggatacctggagataatcaggctgtggctgacccc
cctcaaccaccaagcactggtgcatctcagtcttcagcagtggcagcagcagtagcaact
atacccacgactactagttcactaggaggacatccacttgagtttttacgaaatcagcct
cagttccagcagatgagacaaattatccagcaaaatccttctctgttgccagcattgcta
caacaaattggaagggaaaacccccaactactgcagcaaataagccagcaccaggaacat
tttattcacatgttgaacgagccagttctagagtctcgccaaggtttaagtggcagtgat
gatggtgccagcactggaggaataggagatgctgggaatgctcatatgaactacattcaa
gtaacacctcaggaaaaagaagctatagaaaggttaaaggcattaggatttcctgaagga
cttgtgatacaggcatatttcgcttgtgagaagaatgaaaacctggctgccaactttctt
ctacagcagaacttcgacgaagactga
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