KEGG   Geospiza fortis (medium ground-finch): 102042789
Entry
102042789         CDS       T03755                                 
Symbol
KDM5A
Name
(RefSeq) lysine demethylase 5A
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
gfr  Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:gfr00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:gfr01009]
    102042789 (KDM5A)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:gfr03036]
    102042789 (KDM5A)
Enzymes [BR:gfr01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     102042789 (KDM5A)
Protein phosphatases and associated proteins [BR:gfr01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     102042789 (KDM5A)
Chromosome and associated proteins [BR:gfr03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    102042789 (KDM5A)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 PHD_5 PHD_4 PHD_2 PHD_ash2p_like
Other DBs
NCBI-GeneID: 102042789
NCBI-ProteinID: XP_005421081
LinkDB
Position
Un
AA seq 1623 aa
MELDWQPPFACEVQSFRFTPRIQRLNELEAMTRVKLDFLDQLAKFWELQGSNLKIPVVER
KILDLYGLSKIVANKGGFEVVTKEKKWSKVASRLGYLPGKGTGSLLKSHYERILYPYELF
QSGVSLMGIQKPNLDLKEKVEAEDLSSDAQASPKQASRMNVMLKRTRRVKSQAEAGEMSR
NTELKKLQIFGAGPKMMGLALGAKDKEDEVTRRRKGTRSEAFGMQMRQRKGTLSVNFVSV
DLYVCLFCGRGNNEDKLLLCDGCDDSYHTFCLIPPLPDVPKGDWRCPKCVAEECNKPREA
FGFEQAVREYTLQSFGEMADNFKSDYFNMPVHMVPTELVEKEFWRLVSSIEEDVIVEYGA
DISSKDFGSGFPVKDGRRKLMPEEEDYALSGWNLNNMPILEQSVLAHINADISGMKVPWL
YVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLEDVMKELAPELFESQPD
LLHQLVTIMNPNVLMEHGVPVFRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADW
LPIGRQCVSHYRRLGRHCVFSHEELIFKMAADPECLDVGLAAMVCKEMTLLIEEETRLRE
SVVQMGVLMSEEEVFELVPDDERQCTACRTTCFLSALTCSCNPERLVCLYHPSDLCPCPM
QKKCLRYRYPLEDLPSLLYGVKVRAQSYDTWVSRVTEALSANLNHKKDVIELRVMLEDAE
DRKYPENDLFRRLRDAVKEAETCASVAQLLLSKKQKHSRVSQDSGRTRTKLTMEELKAFV
QQLFSLPCVISQARQVKNLLDDVEEFHERAQEAMIDDVPDSSKLQELIDMGSGLYVELPE
LPRLKQELQQARWLDEVRSTLLDPQRVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLT
VSERWEEKAKVCLQARPRQSMMALEGIVNEAKNIPAYLPNVLALKEALQRARDWTAKVEA
IQNGSNYAYLEQLESLSAKGRPIPVRLDALPQLESQVAAARAWRERTGRTFLKKNSSYNL
LQVLSPRTDIGVYGSSKNRRKRAKELMEKEKEKDLDLESLSELEDGLEEARDAAAVVAVF
KEREQKEIEAMHALRAANLAKMTMVDRIEEVKFCICRKTASGFMLQCELCKDWFHSGCVP
LPKSSSQKKGSSWQAKEVKFLCPLCMRSRRPRLETILSLLVSLQKLPVRLPEGEALQGLT
ERCLAKLSVLSQRMVEQAAREKTEKIISAELQKAAANPDLQGHLTSFQQSAFNRVIGSVS
SSPRQTLDYDDEETDSDEDIRETYGYDIKDNASVKSSSSLEPNLFCDEEIPIKSEEVVTH
MWTAPSFCAEHAYSSASKSCSQGSSTPRKQPRKSPLVPRSLEPPVLELSPGAKAQLEDLM
MVGDLLEVSLDETQHIWRILQATHPPSEDRFLHVMEDDSMDEKPLKMRGRDSSERKRKRK
LERAEQFFGDMKQKSKELKKLEKPKKKKLKLTMDKTKELNKLAKKLAKEEERKKKREKAV
VAKVELAKDSTEKKREKKVLDIPSKYDWSGAEESDDENAVCAAQNCQRPCKDKVDWVQCD
GGCDEWFHQVCVGVSPEMAENEDYICINCAKKPLQGPSSPAHASPPPFLLSYKLPMEDLK
ETS
NT seq 4872 nt   +upstreamnt  +downstreamnt
atggagctggactggcagcctccatttgcatgtgaagtacaaagttttcgtttcactcca
cgaattcagcgcctgaatgaactggaggcaatgacaagagtgaaactggacttcttggat
cagttagcaaaattttgggaactccaaggatccaatttaaaaatccctgtggttgagaga
aaaatactggatctgtatggtttgagcaagattgttgccaacaaaggaggctttgaagta
gtgaccaaagagaagaaatggtctaaagtggcgagtcggcttggctacctgccagggaag
ggcacgggctccttgctcaagtctcactatgaacggatcctgtatccctacgagctcttc
cagtctggggtcagcctcatgggcatccaaaagcctaacttggatcttaaggaaaaagtg
gaggctgaggacctcagttcagatgcccaagcttccccaaagcaggcttcaaggatgaat
gttatgctgaagagaaccaggcgtgtcaaatcccaggcagaggctggagaaatgagtaga
aacactgaactaaagaagctgcagatctttggagctggacccaagatgatgggactggcg
ttgggagcaaaggataaagaggatgaggtgacacgaaggcgcaagggaaccagatcagag
gcgtttgggatgcagatgagacagcgcaaaggaaccctctctgtcaatttcgtgagcgtt
gatctctatgtttgcttattttgtggtagaggaaacaacgaggataaactgctgctgtgt
gatggatgtgatgacagctatcacaccttctgcttgattcctcctcttcctgatgtaccc
aagggtgactggaggtgtccaaagtgtgttgctgaggaatgcaacaaaccccgagaggcc
tttggatttgaacaagctgtcagggaatatactctccagagctttggtgaaatggctgat
aacttcaagtctgattatttcaacatgccggtccatatggttcccactgagctggtagaa
aaagaattctggagattagtgagcagcatagaagaagatgttattgtggaatatggggct
gatatctcatccaaggactttgggagtggcttcccagtgaaggatggccgacgaaagctg
atgccagaggaggaggattatgctctctctggttggaacttgaacaacatgcccattctg
gagcagtcagtccttgctcacatcaatgcagacatctctggcatgaaggtgccctggctg
tatgtggggatgtgcttctcctccttctgctggcacattgaagaccactggagctattcc
atcaactacctgcactggggagagccgaagacgtggtatggtgtgccctctcatgcagca
gagcagctggaagatgtgatgaaggaattggctcctgagctctttgaatcccagcctgat
ctcctgcatcagctggtcactattatgaaccccaatgtgctgatggaacatggtgtacca
gttttcaggacaaatcagtgtgctggcgagtttgttgtgacctttcctcgtgcctatcac
tctggatttaaccagggatataactttgctgaagctgtgaacttctgcactgctgactgg
ctccccattggacgccagtgtgtgagtcactaccgcaggctgggacgtcactgtgttttc
tcccatgaagagctgatcttcaagatggctgcagatccagagtgcctggatgttgggctg
gctgccatggtctgcaaggagatgactctgttgatagaggaggagacacgcctgagggag
tctgttgtacagatgggagtgttgatgtctgaggaagaggtgtttgagctggttccagat
gatgaacgtcagtgcacagcttgcagaaccacgtgcttcttgtcagctctgacgtgttcc
tgcaatcccgaacgcctggtgtgcttgtaccatccttctgatttatgtccctgtcccatg
cagaagaagtgtctaaggtaccggtacccactagaagaccttccttctttgttgtatgga
gtgaaggttagagcacagtcttacgacacttgggtcagtagagttacagaggctctgtct
gccaatctcaaccacaagaaagatgtgattgagctgagagtaatgttggaggatgctgaa
gacaggaaatacccggagaacgatcttttccgcaggctccgagatgctgtgaaagaagca
gagacctgtgcttcagtagcacagctgcttctgagcaaaaagcaaaaacacagcagagtg
agccaagacagtggaaggacacggaccaagctgacaatggaggagcttaaagcatttgtg
cagcagctgttcagcttgccctgtgtcatcagccaggcccgacaagtgaagaatctgctc
gatgatgtggaagagtttcacgagcgtgctcaggaagccatgattgatgatgtcccagac
tcttccaagctgcaggagttgatagacatgggctctggcctttatgttgaacttcctgaa
ctgccaaggttgaagcaagagctgcagcaggcgcggtggctggatgaggtgaggtccacc
ctcttggatccccagagagtcaccctggatgtgatgaagaagctgattgactctggtgtg
ggcttggcaccacatcacgctgtagaaaaagccatggctgagctgcaggagctgctcaca
gtgtcagagaggtgggaggagaaggccaaggtctgcctgcaggccagaccacgccaaagt
atgatggctctggagggcatcgtgaacgaggccaagaacatccctgcttacctgcccaat
gtgctggccctgaaagaagccctgcagcgagctagagactggacagccaaagtggaggcc
attcagaatgggagcaactatgcatacctggagcagctggagagcttgtctgccaagggc
cgccccatcccggtgcgcctggatgcgctgccccagctggagtcccaggtggctgcagct
cgtgcctggagggagcgcacaggaaggaccttcctcaagaagaattccagctacaacctg
ctacaggttctgagcccccggactgatatcggtgtttatgggagcagtaagaacaggagg
aagagggcaaaggagttgatggagaaggaaaaggagaaagatcttgacttggaatctctg
agtgaactggaggatgggctggaggaagccagggacgctgcagctgtggtggctgtgttc
aaggagcgggaacagaaggaaattgaagccatgcacgctctcagggcagccaacttggcc
aagatgaccatggtggaccggatcgaagaagtcaagttctgtatctgccgcaagacagcc
agcggcttcatgctgcagtgcgagctgtgcaaggactggttccacagcggctgcgtgccc
ctgcccaaaagcagctctcagaagaagggctccagctggcaggccaaggaggtgaagttc
ctgtgtcccctgtgcatgcgctcgcgccggccgcgcctggagaccatcctgtcgctgctg
gtgtccctgcagaagctgccggtgcggctgcccgagggggaggccctgcagggcctgacc
gagcgctgcctggccaagctctccgtgctcagccagcgcatggtggagcaggcagctcgt
gagaaaacagagaagatcatcagtgcagagctgcagaaggcagcagctaaccccgacctg
caggggcacttgacaagttttcagcagtcagcctttaacagagtgatagggagtgtgtcc
tcatccccacggcagactttggattatgatgatgaagagacagattctgatgaagacatc
agggagacctatggctatgacataaaggacaatgccagtgtgaaatcctccagcagcttg
gaacccaatttgttttgtgatgaggaaatccccattaaatcagaggaggtggtgacacac
atgtggactgctccctcattctgcgctgaacacgcctattcctctgcttctaaaagctgc
tctcaaggttctagcactccaaggaagcagcctcgcaagagcccgctggtacctcgcagc
ttggagccccctgtgctggagctgtcacctggagcaaaagctcagctggaagatctgatg
atggtaggagatctgctggaggtatctctggatgaaactcagcacatctggcgcatctta
caggccactcatccgccctctgaggacaggtttcttcatgtcatggaggatgacagcatg
gatgaaaaaccactgaaaatgagagggagggactcttctgagaggaaacggaaacgaaaa
ctggagagagcagagcagttctttggagatatgaagcaaaaatctaaagagctgaaaaaa
ctggaaaaacccaagaagaagaagctaaaactcactatggataagacaaaggagctgaac
aagctggcaaagaaactggctaaggaagaggagcggaagaagaagcgagagaaggcagtt
gtggcaaaggtagaactggccaaggacagcacagagaaaaaaagagagaagaaggttctg
gatattccttccaagtatgactggtcaggagcagaagagtcagatgatgagaatgctgtg
tgtgctgctcagaactgccaaaggccctgcaaggacaaagtggactgggtgcagtgtgac
gggggctgtgatgagtggttccatcaggtgtgtgttggggtgtccccagagatggctgag
aacgaggattacatctgtataaactgtgcaaagaaacccctgcaggggcccagcagccct
gcccacgcctcgcctcctcccttcctcctgagctacaaactaccaatggaagatctcaag
gagacgagttag

DBGET integrated database retrieval system