Geospiza fortis (medium ground-finch): 102042847
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Entry
102042847 CDS
T03755
Symbol
GRIN2B
Name
(RefSeq) glutamate ionotropic receptor NMDA type subunit 2B
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04020
Calcium signaling pathway
gfr04080
Neuroactive ligand-receptor interaction
gfr04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
102042847 (GRIN2B)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
102042847 (GRIN2B)
04082 Neuroactive ligand signaling
102042847 (GRIN2B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gfr04040
]
102042847 (GRIN2B)
Ion channels [BR:
gfr04040
]
Ligand-gated channels
Glutamate (ionotropic)
102042847 (GRIN2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
102042847
NCBI-ProteinID:
XP_005421948
UniProt:
A0A6I9HHR2
LinkDB
All DBs
Position
Un
AA seq
1503 aa
AA seq
DB search
MRPRVECYSPRFWLVLAVLATTGSGAHAQKSHPSIGIAVILVGTSDEVAIKDAHEKDDFH
HLSVVPRVELVAMNETDPKSIITRICDLMSDRKIQGVVFADDTDQEAIAQILDFISAQTL
TPILGIHGGSSMIMADKDESSMFFQFGPSIEQQASVMLNIMEEYDWYIFSIVTTYFPGYQ
DFVNKIRSTIEHSFVGWELEEVLLLDMSLDDGDSKIQNQLKKLQSPVILLYCTKEEATYI
FEVANSVGLTGYGYTWIVPSLVAGDTDTVPSEFPTGLISVSYDEWDYGLPARVRDGIAII
TTAASDMLSEHSFIPEPKSSCYNTQEKRIYQSNMLNRYLINVTFEGRNLSFSEDGYQMHP
KLVIILLTKERKWERVGKWKEKKLQMKYYVWPRFELYPDSEEREDDHLSIVTLEEAPFVI
VENVDPLSGTCMRNTVPCQKRIVTENKTDEEPDYMKKCCKGFCIDILKKISKSVKFTYDL
YLVTNGKHGKKINGTWNGMIGEVVTKRAYMAVGSLTINEERSEVVDFSVPFIETGISVMV
SRSNGTVSPSAFLEPFSADVWVMMFVMLLIISAVAVFVFEYFSPVGYNRCLADGREPGGP
SFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEE
YVDQVSGLSDKKFQKPNDFSPPFRFGTVPNGSTERNIRNNYPEMHSYMVKFNQRGVDDAL
FSLKTGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGKVFASTGYGIAIQKDSGWKRQVDL
AILQLFGDGEMEELEALWLTGICHNEKNEVMSSQLDIDNMAGVFYMLGAAMALSLITFIC
EHLFYWQFRHCFMGVCSGKPGVVFSISRGIYSCIHGVAIEERQSAMNSPTATMNNTHSNI
LRLLRTAKNMANLSGVNGSPQSALDFIRRESSVYDISEHRRSFTHSDCKSYNNPPCEENL
FSDYISEVERTFGNLQLKDSNVYQDHYHHHHRPHSIGSTSSIDGLYDCDNPPFNAQSRSI
GKKPLDLGLPPAKHSQLGDLYGKFSFKSDRYGGSGTHDDLIRSDVSDISTHTVTYGNIEG
NAAKRRKQQYKDSLKKRPASAKSRREFDEIELAYRRRPPRSPDHKRYFRDKEGLRDFYLD
QFRTKENSPHWEHVDLTDIYKERGDDFKRDSGGGGGGSCTNRAHHKHGSGEFGGSNEHKH
SVVSGVPAPWEKNLTNLDWEDRSGANFCRSCPSKLHNYTPSTVGQNSTRQACIRCEACKK
AGNLYDISEDNSLQELDQPPAPVPVATSATSSSKYPQSPSNSASKVQKKNRNKLRRQHSY
DTFVDLQKDDSALAPRSVSLKDKGRFLEGSPYAHMFEMPASETTFANNKSSVPATSYHHH
NNPGSSGGYMLSKSLYPDRVTQNPFIPTFGDDQCLLHGSKSYFFRQPVVAGGPKARPDFR
AIVTTNKPVVSALHGAVPARFQKDICIGNQSNPCVPNNKNPRAFNGSSNGHVYEKLSSIE
SDV
NT seq
4512 nt
NT seq
+upstream
nt +downstream
nt
atgaggcccagggtggagtgctactctccaaggttttggctggtgctggcagtcctcgca
acaacagggagcggggcccatgcccagaaaagccacccgagcattggcattgcagtcatc
ctggtggggacctcagacgaagtggccatcaaagatgcccacgagaaagatgacttccac
cacctctcagtggtgcctcgggtggagctggtggccatgaatgagacagatcccaagagc
atcatcacccgcatctgtgacctcatgtctgaccgcaagatccaaggggtggtattcgcc
gatgacacagaccaggaagccattgcccagatcctggacttcatctctgcccagaccctc
actcccatcctgggcatccatggaggctcctctatgatcatggcagataaggatgagtca
tccatgttcttccagtttggcccatcaatagaacagcaagcttctgtcatgctcaacatc
atggaagaatacgactggtacatcttctccattgtcacaacatacttccctggttaccag
gactttgtgaacaagatccgcagtaccattgagcacagctttgtgggctgggaactggag
gaggttcttctgctggacatgtccctggacgatggggactcaaagatccagaaccagctc
aagaagctccaaagccctgttatcctcctctactgcacaaaggaagaggccacctacatt
tttgaggtggccaactcagtgggtctgacaggctatggttacacgtggatcgtgcccagc
ctggtggcaggggatacagacacagtgccatccgagttccccaccgggctcatctctgtc
tcatatgatgaatgggactacggtcttcctgccagagtaagggatggaatagccataatc
accacggctgcttctgatatgctgtctgaacacagcttcatccctgagcccaagagcagc
tgttacaacacccaggagaaaaggatttaccagtccaacatgctcaacaggtacctgatc
aatgtcacctttgaaggcaggaatttgtcgttcagtgaggacggataccagatgcatccc
aagctggtcatcatccttttgaccaaggagaggaagtgggagagggtggggaaatggaag
gaaaaaaagttgcagatgaagtattacgtgtggccgcgctttgagctgtatcctgactct
gaggaacgtgaggatgatcacctgagtattgtgaccttggaagaggcaccatttgtcatt
gtggagaacgtggaccccctaagtggcacctgcatgaggaacacggtcccttgccaaaaa
cgcatcgtgactgagaacaaaacagatgaggagccagattacatgaagaaatgttgcaag
gggttctgcatagacatcctcaagaaaatctcaaagtctgtcaagttcacctatgacctc
tacttggtgactaatggcaagcatggaaaaaagatcaatgggacatggaatggaatgatt
ggagaggttgtcaccaaacgggcctatatggctgtgggatccctcaccattaatgaagaa
cgttcagaagtggtggatttctctgtgcccttcattgagacgggaatcagtgtcatggtg
tcacgtagcaatggaactgtctcaccttctgccttcttagaacctttcagtgctgacgta
tgggtgatgatgtttgtgatgctgcttatcatctctgcggtagctgtcttcgtctttgag
tacttcagccctgtgggctacaatcggtgccttgctgatggcagagaaccaggaggtccc
tctttcaccattggcaaagctatctggctgctgtgggggctggtgttcaacaactctgtg
ccagtacagaatcccaagggtaccactagcaagatcatggtgtcggtgtgggccttcttc
gctgtcatctttctggccagctacactgccaacctggctgccttcatgatccaagaggaa
tacgtggaccaggtgtctggcttgagcgacaaaaagttccagaaaccaaatgacttctca
ccccctttccgcttcgggacggttcccaatggcagcacggaaaggaacatccgcaacaac
taccctgaaatgcacagctacatggtgaagttcaatcagaggggcgtggacgatgctctg
ttctcgctgaagactgggaagttggatgctttcatttatgatgcagcagtgctaaactac
atggctggcagagatgaaggctgcaagctggtgacaattgggagtgggaaagtgtttgcc
tccactggctatggcattgccatccagaaggactcaggctggaagcgccaggttgatctt
gcaattctacagctttttggagatggggagatggaggagctggaagctctctggctcact
ggcatttgtcacaatgagaagaatgaggttatgagcagccagctggatatagataacatg
gcaggtgtcttctacatgttgggagcagccatggccctcagtctcatcaccttcatctgt
gagcatctcttctactggcaattccgccactgcttcatgggtgtctgctctggcaagcct
ggtgtggtcttctccatcagcaggggtatctacagctgcatccatggcgtggccattgaa
gaacgccagtcagcaatgaactcccccacagcaactatgaacaacacccattccaacatc
ctccgcctgcttcggacagccaagaacatggccaacctgtcaggggtcaatggctcacca
cagagtgccctggactttatccgccgcgagtcatctgtctacgacatctctgagcaccgc
cgcagcttcacccactcggactgcaaatcctacaacaaccccccctgcgaggagaacctc
tttagtgactacattagtgaggtggaaaggacctttggcaatctccagctgaaggacagc
aatgtgtatcaggaccactaccaccaccaccaccgcccccatagcattggcagcaccagc
tccatcgacgggctctatgactgtgacaacccgcccttcaacgcccagtcgcgctccatt
gggaagaagcccctggacctgggcttaccccctgccaagcacagccagctgggtgacctt
tatggcaagttctccttcaagagtgaccgctacgggggcagtgggacccacgacgacctg
atccgctcagacgtctctgacatttccactcacacggtcacctatggcaacattgagggc
aatgcagccaagaggcggaagcagcagtacaaggacagcctgaagaagcgcccagcctcc
gccaagtcccggagggaatttgatgagatagagctggcctaccgccggcgcccaccccgc
tcacctgaccacaagcgctacttcagggacaaggaagggctacgggacttctaccttgac
cagtttcggaccaaggagaactcaccacactgggaacatgtggacctgacggatatctac
aaagaacggggagatgactttaaacgtgactcgggaggaggagggggtggatcctgcact
aacagggcccatcacaagcacggctcgggcgagtttggtggaagcaatgagcacaagcat
agcgttgtgagcggggtcccagcgccatgggagaagaacctgaccaatctagactgggaa
gaccggagtggggctaatttctgccgcagttgcccttctaagctgcacaactacacgcca
tcaacggtggggcagaactccacccgccaggcctgcatccgctgtgaggcttgcaagaaa
gcgggcaacctgtacgacatcagtgaggacaactccctccaagagctggaccagccgcct
gcccctgtgcccgtggccaccagtgccacctcctcctccaaatatcctcagagcccttcc
aattctgcctctaaggtgcagaagaagaaccgcaacaaactccgccggcagcactcctac
gacacctttgtggacctgcagaaggatgactcggccctggccccccgcagcgtcagcctc
aaggacaagggccgctttttggaggggagcccctacgcccacatgtttgagatgccagcc
agtgagaccacctttgccaacaacaagtcctcagtgcccgccaccagctaccaccaccac
aacaaccccggcagcagtgggggctacatgctcagcaagtcgctctaccccgaccgggtc
acccaaaaccctttcatccccacttttggggatgaccaatgcttgctccacggcagcaaa
tcttatttcttcaggcagcctgtggtggcaggagggcccaaagccaggccagacttccga
gccattgtcaccaccaacaagccggtggtctcagcccttcatggggctgtgccagcccgt
ttccagaaggacatctgtatagggaaccagtccaacccctgtgtgcctaacaacaaaaac
cccagggctttcaatggctccagcaacgggcatgtttatgagaaactctccagtattgag
tctgacgtttga
DBGET
integrated database retrieval system
