Geospiza fortis (medium ground-finch): 102042886
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Entry
102042886 CDS
T03755
Symbol
ZC3H12C
Name
(RefSeq) zinc finger CCCH-type containing 12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gfr03019
]
102042886 (ZC3H12C)
Messenger RNA biogenesis [BR:
gfr03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
102042886 (ZC3H12C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
UBA_N4BP1_C
zf-CCCH_2
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
102042886
NCBI-ProteinID:
XP_005417759
UniProt:
A0A6I9HDJ0
LinkDB
All DBs
Position
Un
AA seq
890 aa
AA seq
DB search
MSVCFPANEYGTLYIQEYKKNSKVESSACSSFMGLKDHLGHDLGHLYVGSTGTQINAIVP
WSMAEKPTMDKVNSRKEDREKETSEETSGSSSCDSEESTNSDNDSERLNNSASESHLLPK
THRQLCRSPCLEPHILKRNEILQDFRIEEAQIVPKEVKKPPDVVKEYQTKLEFALKLGYS
EEQVQLVLNKLGTDALINDILGELVKLGNKTETDQTVTNANTSVMREASSIESQRSESPL
QEDVTEDGDNLRPIVIDGSNVAMSHGNKEVFSCRGIKLAVDWFLERGHKDVTVFVPAWRK
EQSRPDALITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAFESDGIIVSND
NYRDLANEKPEWKKFIDERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKKPIVPEHKKQ
PCPYGKKCTYGHKCKYYHPERGNQPQRSVADELRAMSRSTAAKTTSEGGLVKSNSVPCST
KNEGTSELKRAAPKRQSDPSIRTQVYQDLEEKLPTKNKLETRSVPSLVSIPSSSAGKPQS
TAPLTNGLPSGVHFPPQDQRPQGQYPTVMMATKNHGTPMPYDQYPKCESPVDVGYYSMLS
AYSNLSISGPRSPERRFSLDTDYRISSVASDCSSEGSVSCGSSDSYVGYSDRSYMSSPDP
QLEENLKCQHMHAHGRLNTQPFLQSYHEPLARVQSYSHEEPKHHHKSPIPYMAVHLQHPA
VGARSSCPNEYSAPQSSSHSKALHLGRALVSTRIDSVSDSRLYENSPLRHRKPYSGQEGL
GGWDRQSYGMDAYGYRQTYSLPSNPTQPCYEQFAFQSLPEQQEQPWRVPYCGIPPQDPPR
LQDTREKVYINLCNIFPPDLVRMVMKKNPHVTDAQQLAAAILVEKSQLGY
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgtgttttccagccaacgaatacggaacactttatattcaggaatacaagaaa
aacagcaaagtggagtcaagtgcatgcagcagcttcatgggcttgaaggatcatctgggg
catgacttaggccacctttatgtggggagcactggcacacaaataaatgcaattgtacct
tggtcgatggcggagaagccaacgatggataaggttaattctaggaaagaagacagagaa
aaggagacatctgaagagacttctggaagctccagctgtgactctgaagaaagcacaaat
tctgataatgattcagagagactgaataattctgcatcggagtcacatttattgcctaag
actcatcgacagctgtgccgatctccttgcttagagcctcatatactcaaaagaaatgaa
atcttgcaagactttaggatagaagaggctcagatagtacctaaagaagtcaaaaagcct
cctgatgtggtgaaagaatatcaaaccaaactggagtttgcacttaagttgggttactct
gaagagcaggttcaacttgtactaaataaacttggtactgatgctttaataaatgatatt
ttgggagaacttgtcaaacttgggaataaaactgagactgatcagactgtaactaatgct
aacactagtgtaatgcgtgaagcgtcttccatagagtctcagaggtcagagtctccactg
caggaggatgtgacagaggatggagacaacctgaggccaatagttattgatggcagcaat
gttgcaatgagccatgggaacaaagaagtattttcttgtcgaggaatcaaattggcagta
gattggtttttggaaagaggccacaaggatgttactgtgtttgtgccggcatggaggaaa
gaacagtcgagaccagatgctcttataacagatcaagaaatcttacgtaaattggagaag
gagaagattctcgtgttcactccgtcccggcgcgtgcaggggagaagggtggtgtgctac
gatgaccgattcatagtgaagttggccttcgagtcagatggcatcattgtctccaatgat
aactacagggatctagctaatgaaaagccagaatggaagaagttcatagatgaacgcttg
ttgatgtattcttttgttaatgacaaatttatgcctcctgatgatcctcttggccgccat
ggtccaagtctggacaattttcttaggaagaagcctattgtgccagaacataagaagcaa
ccatgtccatatgggaagaaatgtacctatggacacaaatgcaaatactatcatccagaa
agaggaaatcagcctcagcgatccgtagctgatgaactccgtgccatgtctagaagcaca
gctgccaaaactacaagtgaaggaggactggtaaaaagcaatagcgttccctgtagcact
aaaaacgagggcacttcagagctgaagcgcgctgctccaaagaggcaatcagatcctagt
ataaggactcaagtctatcaggacttggaggaaaagcttcccaccaaaaacaaattggaa
accaggtctgtaccttctttagttagcataccaagttcctctgctggaaaaccccaaagt
actgcacctttaactaacggccttccatccggagttcacttcccacctcaggatcaaaga
ccacagggacagtatcctacagtgatgatggcaaccaaaaatcatggaacaccaatgcct
tatgaccagtatccaaaatgtgagtctccggtggatgtagggtattactctatgctgagt
gcatattcaaatctcagcatttcgggaccgcgtagtcccgagaggcgcttctccctggac
acagattatcggattagctctgtagcttccgactgcagcagcgaggggagcgtcagctgt
ggcagcagtgattcctatgtgggttacagcgaccgctcctacatgagttctcctgaccca
cagctggaggagaacttgaagtgccagcacatgcacgcccatggccgccttaacactcag
cccttcctgcagagctaccatgagcccctggctcgagtgcagagctacagccacgaagaa
ccaaagcaccaccacaaatctcccattccgtacatggctgtgcatctgcagcacccagca
gtcggtgctcgttccagctgtcccaacgagtactctgcgcctcagagctcgtctcattcg
aaggcactgcacctggggagagccctggtgtccacgaggatagacagcgtctcagactcg
cgcttgtacgaaaactcccccttaagacacaggaagccttactctggccaggaagggctg
ggaggctgggataggcagagttacggcatggatgcctacggctaccgccagacgtactcc
ttgcccagcaaccccacgcagccatgctatgagcagttcgccttccagagccttcccgag
cagcaggagcagccctggcgcgtcccttactgtggaatccccccgcaagaccccccaagg
ctccaagacacccgggagaaggtttacattaacctctgcaacatctttccccccgatctt
gtgaggatggtgatgaagaagaaccctcacgtgacagatgctcagcagctcgctgctgcc
atcttagtggagaaatctcagctaggttattga
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