Geospiza fortis (medium ground-finch): 102042933
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Entry
102042933 CDS
T03755
Name
(RefSeq) nipped-B-like protein
KO
K06672
cohesin loading factor subunit SCC2
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
102042933
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gfr03036
]
102042933
Chromosome and associated proteins [BR:
gfr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
102042933
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT_EZ
HEAT
Cnd1
Cnd3
DNA_repr_REX1B
MIF4G
Motif
Other DBs
NCBI-GeneID:
102042933
NCBI-ProteinID:
XP_014166872
LinkDB
All DBs
Position
Un
AA seq
1751 aa
AA seq
DB search
MPLCERVKMNKRKRSTVNEKPKYAEISSDEDNDSEEAFESSRKRHKKDRDEAWEYEEHDR
RSSGDYRRSGYCHEGRRTSGSGRYRNRSPNDSEMDDYSPLPSLSEVARKMKKKEKQKKRK
AYEPKLTPEEMMDSSTFKRFAASIENILENLEDMDFTAFGDDDEIPQELLLGKHQLSELG
SESAKIKAMGIMDKLSTDKTVKVLNILEKNIQDGSKLSTLFNHNNDTEDEERLWRDLIME
RVTKSADACLTAINIMTSPNMPKAVYIEDVIERVIQYTKFHLQNTLYPQYDPVYRVDPHG
GGVLSSKAKRAKCSTHRQRVIVMLYNKVCDIVSSLSELLEIQLLTDTTILQISSMGITPF
FVENVSELQLCAIKLVTAVFSRYEKHRQLILEEIFTSLARLPTSKRSLRNFRLNSSDTDG
EPMYIQMVTALVLQLIQCVVHLPSTEKDSNAEEESNKKVDQDVLMTNSYETAMRTAQNFL
SIFLKKCGSKQGEEDYRPLFENFIQDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKSTE
MALRVASLDYLGTVAARLRKDAVTSKMDQGSIARILKQVSGGEDEIQQLQKALLDYLDEN
TETDASLVFSRKFYIAQWFRDTTMETEKAIKSQKDEDSSEGTHHAKDVETTGQIMHRAES
RKTFLRSIIKTAPSQFSTLKMNSDTVDYEDACLIVRYLASMRPFAQSFDIYLTQILRVLG
ENAIAVRTKAMKCLSEVVAVDPSILARLDMQRGVHGRLMDNSTSVREAAVELLGRFVLCR
PQLAEQYYDMLIERILDTGISVRKRVIKILRDICIEQPTFPKITEMCVKMIRRVNDEEGI
KKLVNETFQKLWFTPTPHHDKEAMTRKILNITDVVAACRDTGYDWFEQLLQNLLKSEEDA
SYKPVKKACTQLVDNLVEHILKYEESLSDSDNKSVNSGRLVACITTLFLFSKIRPQLMVK
HAMTMQPYLTTKCSTQNDFMVICNVAKILELVVPLMEHPSETFLATIEEDLMKLIIKYGM
TVVQHCVSCLGAVVNKVTQNYKFVWACFNRYYGALSKLKSQHQEDPNSTILTANKPALLR
SLFTVGALCRHFDFDQEDFKGNSKVKXLVNIKDKVLELLMYFTKHSDEEVQTKAIIGLGF
AFIQHPSLMFEQEVKTLYNSILSDKNCSVNLKIQVLKNLQTYLQEEDTRMQQADRDWKKV
AKQEDLKEMGDISSGMSSSIMQLYLKQVLEAFFHTQSSVRHFALNVIALTLNQGLIHPVQ
CVPYLIAMGTDPEPSMRNKADQQLVEIDKKYAGFIHMKAVAGMKMSYQVQQAINTCPQDP
VRGFRHDESSNALCSHLYSMIRGNRQHRRAFLISLLNLFDDTAKTEVNMLLYIADNLACF
PYQTQEEPLFIMHHIDITLSVSGSNLLQSFKESMVKDKKKERKPSSDEETESDSNSGSES
KSEEEASKPRRLRKRVNSDSDSDEENDINAVMKCLPENSAPLIEFANVSQGILLLLMLKQ
HLKNLCGFSDSKIQKYSPSESAKVYDKAINRKTGVHFHPKQTLDFLRSDMANSKITEEVK
RSIVKQYLDFKLLMEHLDPDEEEEDGEVSASTNARNKAITSLLGGGSPKNNAAETEDDES
DGEDRGGGTSGVRRSKRNSDSTELAAQMNESVDVMDVIAICCPKYKDRPQIARVVQKTSN
GFSVQWRAGSYSGSWTEAKRRDGRKLVPWVDTIKESDIIYKKIALTSANKLTNKVVQNLR
SLYAAKDGTSS
NT seq
5256 nt
NT seq
+upstream
nt +downstream
nt
atgccactttgtgaacgtgtgaaaatgaacaagcgcaaacgtagcacagttaatgagaaa
ccaaaatatgctgaaatcagttctgatgaagataatgacagtgaagaagcttttgaatct
tctcgtaaaagacataaaaaggatagagatgaagcttgggagtatgaagaacatgataga
agaagttctggtgactataggagaagtggttattgtcatgaaggaaggaggacttctggt
agtggccgttatcgtaatcgcagtcccaatgactctgagatggatgattattctcctctt
cctagcctcagtgaggtagctagaaaaatgaagaaaaaagaaaaacaaaagaagaggaaa
gcttatgaacctaaactaacacctgaagaaatgatggattcttctactttcaaaagattt
gctgcttcaatagagaatattttggaaaatttagaagacatggattttacagcatttggt
gatgatgatgagattccacaagaactgctactgggaaagcatcagcttagtgagttgggg
agtgaatctgcaaaaatcaaggcaatgggcattatggacaagctctcaacagataaaaca
gtaaaagtcttgaatattttggagaagaatattcaagatggatcaaagctttccacatta
tttaaccataacaatgacactgaagatgaggagagattatggagagatcttataatggag
agagtgacaaaatctgctgatgcttgtcttactgctatcaatattatgacatcaccaaat
atgcctaaagctgtatatattgaagatgtaatagaaagagttattcagtacacaaaattt
catttgcaaaacactctctatcctcagtatgatcctgtgtatagagtggatcctcatggc
ggtggtgttttaagttcaaaagcaaaacgtgccaagtgttccacccacaggcaaagagtt
atagtgatgttatataacaaagtttgtgacattgtcagcagtttgtcagagttgctagag
atacagcttctcactgatacaactattcttcaaatatcatctatgggaataacacctttc
tttgtagaaaatgtcagtgaactacagctttgtgccatcaaattagtgactgcagtgttc
tccaggtatgaaaaacatagacagctaatactagaagaaattttcacttccctcgcaaga
ctaccaaccagcaagaggagtttgagaaatttcagattaaacagcagtgacactgatgga
gagcctatgtatattcagatggtaacagcactagttctgcagcttattcagtgtgtggtg
catttgccatcaacagaaaaagattctaatgcagaggaggaatcaaacaaaaaagtggat
caagatgtgcttatgactaactcatatgaaacagccatgagaacagcacaaaacttcctt
tctattttccttaagaaatgtggcagtaaacaaggggaagaagattacagaccactgttt
gagaactttattcaagatcttctttccacagtcaataaaccagaatggccagctgcagag
ttgctacttagcttattaggaaggctattggttcaccagttcagtaacaaatctacagaa
atggcattaagagttgcatcgcttgactatcttggaactgtagctgcaagactcaggaaa
gatgcagtcactagcaaaatggatcaaggttctatagccagaatactcaaacaggtttca
ggaggagaagatgaaattcaacagctgcaaaaggctttgctagattatctggatgagaac
acagaaactgatgcatcattagtgttttctcggaagttttatatagctcagtggttccgg
gatacaactatggagacagagaaagcgattaaatctcagaaggatgaggactcatctgaa
ggaactcatcatgcaaaagatgttgagaccacgggccagatcatgcatagagcggaaagt
cgcaaaacatttcttcgcagcatcattaaaactgctccatctcagttcagtacattaaag
atgaattctgatactgtggactatgaagatgcatgtttgattgttcgctacttggcctct
atgaggccatttgcccagagctttgatatttatttgacacagattctacgtgtacttggt
gaaaatgcaattgctgttcgaacaaaagccatgaagtgtctgtctgaggttgttgctgta
gaccccagtattctagccaggcttgatatgcaacgaggagttcatgggcggctaatggat
aactccactagtgtaagagaagcagctgtggagcttcttggccgatttgtgctctgtcgt
cctcagctagctgagcagtattatgatatgctgattgaaagaatattggatactggtatc
agtgtcagaaaaagagtcataaagatacttagggatatctgcattgaacaaccaacattt
cccaaaattactgagatgtgtgtaaaaatgattcggagagtcaatgatgaagaaggcatt
aagaaattagtaaatgagacattccagaagctctggtttactccaactccacaccatgac
aaagaagcgatgacaaggaaaatactaaacatcactgatgtggttgcagcttgtagagat
acaggctatgattggtttgaacagcttcttcaaaatctgttgaagtcagaagaagatgcc
tcatataaacctgtgaagaaagcctgtactcaacttgttgacaatttggttgagcacatt
cttaaatatgaggaatccttgtcagattctgacaacaaaagtgtgaattctggtcgcttg
gttgcttgcataaccactttgttcttattcagcaaaatcaggccccagctaatggtcaaa
catgccatgaccatgcagccatacctgaccactaaatgtagtacccagaatgattttatg
gtgatctgcaatgttgcaaaaatcttagaacttgtagtgccactaatggaacacccaagt
gagacatttcttgccactattgaggaagacctcatgaaactcatcatcaaatatggcatg
acagttgttcagcattgtgtgagctgtcttggggctgttgtgaacaaggtcactcagaac
tataaatttgtgtgggcctgttttaatagatactatggtgcactttcaaaattaaaaagt
caacaccaagaagaccccaacagtacaatacttactgccaataaaccagcactccttaga
tcacttttcactgttggagcactgtgtcggcattttgattttgatcaggaagattttaag
ggcaacagtaaggtaaaatagcttgttaacattaaggataaagtacttgaactactgatg
tattttacaaagcattcagatgaagaagtacagacaaaagccattatcggccttggattt
gcatttatacaacacccaagtttaatgtttgaacaggaagtgaagaccctgtacaacagc
attctttcagacaagaactgttcagtaaacttaaaaatccaggtgttgaaaaaccttcag
acctacttgcaggaggaggatacacgtatgcagcaggcagacagagactggaaaaaagta
gcaaagcaggaagatctgaaagaaatgggtgatatttcctcagggatgagtagttccatc
atgcagctatatctcaaacaggtccttgaggctttctttcatacccagtccagtgtacgc
cactttgctctaaatgtcattgcactgacattaaaccagggtctcatccatcctgttcag
tgtgtgccgtacttaattgctatgggcacagatccagagccctctatgcgaaacaaagct
gaccagcaattggtggaaatagacaaaaagtatgctgggttcattcatatgaaagcagtg
gctggtatgaagatgtcttaccaggtacaacaggcaatcaatacctgcccacaggatcct
gtgagaggttttagacatgatgaatcatccaatgcattgtgttcacacctatactccatg
attcgagggaaccgtcaacatagacgagcatttctaatttccttactcaacctctttgat
gatactgcaaaaacagaggtgaatatgcttttgtacatagcagacaatctagcctgtttt
ccttaccaaacacaggaagagccactgtttataatgcatcatatagacattacactatca
gtttctggtagcaacctactacagtcatttaaagagtctatggtgaaagacaaaaaaaag
gaaagaaagccttcatcagacgaggagactgagagtgacagtaacagtggtagtgagagc
aaaagtgaggaggaagcttctaagcctcggaggttacggaaacgagtaaactctgattca
gattctgatgaagaaaatgatataaatgccgtgatgaaatgtttaccagaaaattcagct
cctttaattgaatttgcaaatgtctcccaaggcatattattacttttgatgctgaaacag
catttaaagaacctctgtggattctctgatagtaaaattcagaaatattctccatctgaa
tctgcaaaagtgtatgataaagctataaacaggaagacaggagtacatttccatccaaaa
caaactctggattttctgcggagtgatatggctaattctaagattactgaagaagtgaag
aggagtatagtaaaacagtacttagatttcaagctccttatggaacatttggatcctgat
gaagaggaagaagatggagaggtgtcagctagcacaaatgctcggaacaaagcaattacc
tcacttcttggaggaggcagccctaaaaacaatgcagctgagacagaggatgatgaaagt
gatggggaggatagaggaggaggcacttcaggggtgagaaggtcaaaacgaaattcagac
tctacagagttggcagcacagatgaatgaaagtgttgatgtcatggatgtcatcgctatt
tgctgtccaaagtacaaagaccgaccacaaattgcaagagtagtacagaaaaccagcaat
ggcttcagtgttcagtggagggcaggctcctacagtggctcctggactgaggctaagcgc
cgtgatggccgcaaactggtgccttgggtagacactattaaagagtcagacattatttac
aaaaaaattgctctaacaagtgctaataagctgactaataaagttgttcaaaatttacga
tcgctgtatgctgccaaggatggaacttccagctaa
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