KEGG   Geospiza fortis (medium ground-finch): 102043220
Entry
102043220         CDS       T03755                                 
Symbol
CUL5
Name
(RefSeq) cullin 5
  KO
K10612  cullin 5
Organism
gfr  Geospiza fortis (medium ground-finch)
Pathway
gfr04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:gfr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    102043220 (CUL5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gfr04121]
    102043220 (CUL5)
   03400 DNA repair and recombination proteins [BR:gfr03400]
    102043220 (CUL5)
Ubiquitin system [BR:gfr04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul5 complex
    Cullin
     102043220 (CUL5)
DNA repair and recombination proteins [BR:gfr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     102043220 (CUL5)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 TFC3_eWH
Other DBs
NCBI-GeneID: 102043220
NCBI-ProteinID: XP_005417761
LinkDB
Position
Un
AA seq 806 aa
MADVSHPRLPQVGAEDFSGTVQCLSSGLPVLIFVNKGSLQFEDKWDFMRPIVLKLLRQES
VTKQQWFDLFSDVHAVCLWDDKGPAKIHQALKEDILDFIKQAQARVLSHQDDTALLKAYI
VEWRKFFTQCDILPKPFCQLEITLMGKQGSNKKSNVEDSIVRKLMLDTWNESIFSNIKNR
LQDSAMKLVHAERLGEAFDSQLVIGVRESYVNLCSNPEDKLQIYRDNFEKAYLDSTERFY
RTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRRECNSVEALMECCVNALVTSFK
ETILAECQGMIKRNETEKLHLMFSLMDKVPNGIEPMLKDLEEHIVSAGLADMVAAAETIT
TDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKAVVNDATIFKLELPLKQKGV
GLKTQPESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYH
KAHLTRRLILDISADSEIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQAFKEMH
KNNKLALPADSVNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVEEFYKKNHSGRKLHWH
HLMSNGIITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRTL
WSLVAFPKLKRQVLLYEPQVNSPKDFTEGTLFSVNQEFSLIKNAKVQKRGKINLIGRLQL
TTERMREEENEGIVQLRILRTQEAIIQIMKMRKKITNAQLQTELVEILKNMFLPQKKMIK
EQIEWLIEHKYIRRDESDINTFIYMA
NT seq 2421 nt   +upstreamnt  +downstreamnt
atggcagatgtcagtcaccccaggctgccgcaggttggagcagaagatttcagtgggaca
gtccagtgtttgagctcaggactgcctgtcctgatctttgtgaataaaggttcacttcag
tttgaagacaaatgggatttcatgcgcccgatcgttctgaaacttcttcgtcaggagtct
gtcacgaaacagcaatggttcgatctgttttcagatgtacatgcagtgtgcttgtgggat
gataaaggtccagcaaaaatccatcaagctctgaaggaagacatccttgattttattaaa
caggcacaagcaagagtgctgagtcaccaggatgatacagctctactcaaagcctacatt
gtggagtggcgcaagttcttcacccagtgcgacattttgcccaagcccttctgtcagtta
gagatcactctgatgggcaagcagggcagcaacaagaagtccaacgtggaagacagcatt
gttcgaaagctcatgttagatacatggaatgaatccatattttcaaatataaaaaacaga
cttcaggacagtgcaatgaagctagttcatgctgaaagactaggagaagcttttgactcc
cagctcgttattggagttcgagaatcatatgttaacctctgttctaatcctgaagataaa
cttcagatatatcgggataactttgaaaaggcatatttggattcaacggagagattttat
agaacacaggctccttcttatttacaacaaaacggtgtacagaattatatgaaatatgca
gatgctaaactaaaagaagaagagaaaagagcactacgatatttagaaacaagacgtgaa
tgtaactctgtagaagcactcatggagtgctgcgtcaatgccctggtgacatcttttaaa
gagactattttagctgaatgccaaggcatgatcaaacgaaatgaaacagaaaagttgcat
ttaatgttttcactgatggataaagttccaaatggcatagagcctatgctaaaggatttg
gaagaacatattgttagtgctggacttgcagacatggtagcagctgctgaaactattact
actgattctgagaagtatgtagagcaattgctcacgctatttaatcggtttagcaagttg
gttaaagaagcttttcaagatgatccaagatttcttactgccagagataaggcatacaaa
gcagttgtgaatgatgctacaatatttaaacttgaattgccattgaagcagaagggtgtt
ggattgaaaacacagcctgaatccaaatgccctgagcttcttgctaattactgtgacatg
ttgctaagaaaaacaccactaagcaaaaaactaacctctgaagaaattgaagcaaagctt
aaagaagtgcttttggtacttaaatatgtacagaataaagatgttttcatgagatatcac
aaagctcacttaacgagacgtctgatattagatatatcagctgatagtgaaattgaggag
aatatggtggaatggctcagagaagtgggaatgccagcagattatgtaaacaagctggct
agaatgttccaggatatcaaagtctctgaagacttgaaccaggctttcaaagaaatgcac
aaaaataataaacttgctttaccagctgactctgtgaatattaaaattttaaatgctggt
gcctggtcccgaagttctgaaaaagtgtttgtctcactccccacggaattagaagatctc
atcccagaggtcgaagaattttataaaaagaatcacagtggtagaaaactccactggcac
cacctcatgtccaatggaattataacatttaagaatgaggttggccagtatgacttggag
gttacaacatttcagctggctgtgctgtttgcgtggaaccaaagacccagagaaaagatc
agctttgaaaatcttaaactggcaactgagctccctgatgcagaacttaggaggacttta
tggtctcttgtagcatttccaaagctgaaacgtcaggttttattatatgaacctcaagtc
aattcacccaaagactttacagaaggaaccctcttctcggtgaaccaggagttcagttta
ataaaaaacgctaaagttcagaaaaggggtaagataaatttgattggtcgattgcaactt
actacagagaggatgcgggaagaggagaatgaaggaatagtccagctaagaatattgcga
acccaggaggctatcatccaaataatgaagatgcggaagaaaattactaatgcccagctt
cagactgaactggtagaaatattgaaaaacatgttcttgccacaaaagaaaatgataaaa
gagcaaatcgagtggcttatagagcacaaatatatcagaagagatgagtcggatatcaac
acgtttatatacatggcataa

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