Geospiza fortis (medium ground-finch): 102043229
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Entry
102043229 CDS
T03755
Symbol
TBC1D8B
Name
(RefSeq) TBC1 domain family member 8B
KO
K19951
TBC1 domain family member 8/9
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gfr04131
]
102043229 (TBC1D8B)
Membrane trafficking [BR:
gfr04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
102043229 (TBC1D8B)
Endosome - Golgi transport
Rab GTPases and associated proteins
102043229 (TBC1D8B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
102043229
NCBI-ProteinID:
XP_014162055
LinkDB
All DBs
Position
Un
AA seq
1110 aa
AA seq
DB search
MWLKPEEGLLKNALKLWVQERSNQYFVLQRRRGYGEEGGGGLTGLLVGTLDAVLDSTSKV
APFRILHQTPDSQVYWSIACGSSREEITEHWEWLEHNVMKTLSVFDSNEDITSFVQGKIR
GLIAEEGKYSFVREDDPEKFREGLMKFEKCFGLPEQEKLITYYSCSYWKGRVPCQGWLYL
STNFLSFYSFLLGAEVKLIISWDEISKLEKTSNVILTESIHVCSHGEDHYFSMFLKISET
FLLMEQLANYAVRRLFDKETFENDPVLHDPLQITKRGLESYAHSKHFSAFFRLPKEESLK
EVHECFLWVPFSHYNTHGKMCISENYICFASQDGSLCSVIIPLREVTGVDKGDPANRGVS
ISTKGKTAFRFTEVRDFELLVAKLRMKCNATASPQHIISTEVAAGSATDSPKDFGAGQSK
MGQRDNIKTVSTEALMTVYHPQDAENLDSKMLKEKMKEQSWNILFAERGHGVSMFRTKKT
RDLVVRGIPEALRGELWLLFSGAVNDMASNPGYYTELVEKSLGTCTLATDEIERDLRRSL
PEHPAFQSDTGISALRRVLTAYAFRNPQIGYCQAMNILTSVLLLYAKEEEAFWLLVAVCE
RMLPDYFNRRIIGALVDQAVFEELIRVHLPQLTDHMTDMTFFSSVSLSWFLTLFISVLPI
ECAVNVVDCFFYDGIKAILQLGLAVLEYNMEKLLTCKDDAEAVTVLNRYHCNFKTSKDSP
LPPAVQQGSNLSDTKSDHPKVDITDLIRESNERYGDIRYEDVESLRCRNRLYVIQTLEAT
TKQNVLRVVSQEVKFSPTDLEELYELFKKEHFLSCYWSVNSPVLQHHDASLPYLEQYRVD
CQQFRVLCHLLSPWSHCANRDSLALWTFRLMDESSNCLINFKQFACVLDTMYNGSFTDKL
KFLFKLHIPPAFTEVESLSPSKGDDLSKEELMHFSQLSVSSVGDNLESGSLKSSPEKGKG
KVDIQAYLKQWQDELLKKEENVKDLPRMNQSQFIQFSKTLYNLFHGDPEEELLYRAIAVA
PMSPVRSPVAVTEVAAEVPRERQEESSSEQTEGSRAQSLEGNHEWSFAFEQILASLLNEP
AFVRFFEKPHDIKAKIESAKNLQLKARTRM
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgtggctgaagcccgaggaggggctgctgaaaaatgccctcaagctgtgggtgcaggag
cgctccaaccagtacttcgtgctgcagaggcggcggggctatggcgaggagggcggaggc
gggctgactggtctccttgtgggaacattggatgcagtgttggactccacgtcgaaggtg
gccccattccgcatcctgcaccagacgcccgactcgcaggtgtactggtccatcgcgtgc
ggatccagcagagaagaaataacagaacattgggagtggttagaacacaatgttatgaag
actttatcagtgtttgattcaaatgaagatattacgagctttgtccagggaaagataaga
ggtttgattgctgaagagggaaaatattcttttgtaagagaagatgatcctgagaagttt
cgtgaaggtcttatgaagtttgaaaagtgctttggattaccagagcaggagaagttgatt
acctactactcatgcagttactggaagggcagagtgccctgtcaaggatggctctatctt
agtaccaacttcctgagcttctactcctttttgcttggagcagaagtaaaacttattatc
tcctgggatgaaatatcaaaacttgagaaaacttccaatgtgattctgacagagagcatt
catgtgtgctcccatggggaagatcattatttttccatgtttttgaaaataagtgaaaca
ttcctgctcatggagcagctggcaaactatgcagttaggagactttttgacaaggagaca
tttgagaatgatccagtccttcatgaccctctgcagatcaccaagagaggcttggagagc
tatgcccacagtaagcattttagtgcgttcttcaggctacctaaagaagagtccttgaag
gaagttcatgagtgcttcttatgggttcctttcagtcattataacacccatgggaaaatg
tgcatttcagaaaactacatctgctttgctagccaggatggcagcctgtgcagtgtaatc
attccattgagagaggtcacaggggtggataaaggagatccagccaacagaggagtcagc
atcagtaccaaagggaaaacagcttttcgtttcacagaggtgagagattttgaactgctt
gtggcaaagctcaggatgaaatgcaatgcaactgcaagtcctcaacacatcataagtact
gaggttgcagctggttctgccactgacagtccaaaggattttggtgcaggacagtcaaag
atgggccagagagataacatcaaaactgtcagtacagaagcacttatgactgtctaccat
cctcaggatgctgagaaccttgactctaaaatgttgaaagaaaaaatgaaggagcagtca
tggaacatcctgtttgcagaacggggccatggggtcagtatgtttcggacaaagaagact
cgagacctggttgtaagaggcatcccagaggcattaagaggagaactctggctgctcttc
tcaggtgctgtaaatgatatggcatccaaccctggttattacactgagctggtggagaag
tccttaggaacgtgcactttggctactgatgaaattgaacgagatttacgtcgctccttg
cctgagcatcctgcttttcaaagtgacacaggaatttctgccctcaggagagttcttaca
gcctatgcattcaggaatccacaaattggatattgtcaggcaatgaatattctaacatca
gtacttctgctgtatgctaaagaggaggaagcattctggcttttggttgctgtgtgtgaa
aggatgctccctgattatttcaatcgccgaatcattggtgccttggtagatcaggcagtg
tttgaggagctcatcagggttcacctgcctcagttgacagaccacatgacggacatgact
tttttctcctcggtctctctctcctggttccttaccctttttatcagtgtgctgccaatt
gaatgtgcagtcaatgtggtggactgtttcttctatgatggaataaaggcaatcttgcag
ctgggccttgcagtgctggaatacaacatggagaagttgctcacttgtaaggatgatgca
gaagcagtcactgttctcaacaggtatcactgtaacttcaagacttccaaagacagtcct
ttacctccagctgtgcagcagggctccaacctcagtgatacaaagagtgaccatccaaaa
gtggacatcactgatctgatccgagagtcaaatgaaaggtacggtgacattcgctatgag
gacgtggagagcttgcgctgcaggaaccggctttatgtgatccagaccttggaagctacg
accaagcagaatgtgctacgtgttgtgtctcaagaagtaaaattcagtcctactgatctt
gaagagctttatgaattattcaagaaggagcatttcctttcctgttactggagtgtaaat
agtcctgtgctgcagcaccatgatgccagcctgccctaccttgagcagtaccgggttgat
tgccagcagttcagggttctgtgccacctcctgagcccctggtcccactgtgccaacaga
gactccctggctctctggacattccgactgatggatgagagttccaactgccttataaac
ttcaaacaatttgcctgtgttcttgatacgatgtataatggaagcttcactgacaaactc
aagtttctttttaagttgcacatccctccagcttttactgaagtagaatctctaagccct
tccaaaggggatgatctttcaaaagaagaactgatgcacttcagccaactcagtgtttca
tctgttggggataatcttgaaagtggttctttgaagagcagcccagaaaaagggaagggg
aaggttgacattcaggcatatctgaagcaatggcaagatgaacttcttaaaaaagaagaa
aatgtcaaggatttgccacgaatgaatcagtctcagttcatccagttctcaaaaactctc
tacaatctgttccatggggatcctgaggaggagctcctgtaccgagccatcgcggtggct
cccatgtcacctgtcagaagtccagttgctgttacagaagtggctgctgaagtgcccaga
gagaggcaggaggaaagcagctctgagcagactgaaggcagtagagcacagagtttggaa
gggaaccatgaatggtcttttgcctttgaacagattctggcatccttattaaatgagcca
gcctttgtgagattttttgaaaaacctcatgacataaaagctaaaatagagagtgctaaa
aatttacaacttaaagcaagaaccagaatgtaa
DBGET
integrated database retrieval system
