Geospiza fortis (medium ground-finch): 102043233
Help
Entry
102043233 CDS
T03755
Symbol
DENND4C
Name
(RefSeq) DENN domain containing 4C
KO
K20163
DENN domain-containing protein 4
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gfr04131
]
102043233 (DENND4C)
Membrane trafficking [BR:
gfr04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
102043233 (DENND4C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
PPR_2
DUF2464
PPR_3
PPR_long
PPR
Motif
Other DBs
NCBI-GeneID:
102043233
NCBI-ProteinID:
XP_005420920
LinkDB
All DBs
Position
Un
AA seq
1893 aa
AA seq
DB search
MIEDKGPRVADYFVVAGLTDTDTATLLDQEISRHETKSTGPKAPITDIAVIIKSAGETVP
EGYTCVEATPTALQANLNYGSLKSPELFLCYKRGRDKPPLTDIGVLYEGKDRIISGCEVI
QATPYGRCANVNNSSASSQRIFITYRRAPPVRPQNSLAVTDICVIVTSKGETPPHTFCKV
DKNLNCGMWGSSVYLCYKKSVPASNSLAYKAGLLFRYPQENYESFPLSDSVPLFCLPMGA
TIECWDPQTKYPLPVFSTFVLTCSSAEKVYGAAIQFYEPYPRELLTEKQQSQLGLLTTVE
RKVITSKSINSNKCICLLSHWPFFEAFRKFLMFIYKLSVSGPHPLPIEKHISHFMHNIPF
PSPQRPRILVQLSAHDALILSQPVSTPLPLSGANFSTLLMNLGPENCATLLLFVLLEGKI
LLHSLRPAVLTGVAEAVVAMIFPFQWQCPYIPLCPLSLATVLSAPLPFIVGVDSRYFDLY
DPPQDIVCIDLDTNMVYISDDKKNTNWKQFPKKPCKSLLSSLKKLHPQLAAVHRKTQEGS
AVEMTPIEADFSWQKKMIELEMLIQEAFLRFMASILKGYRTFLKPITQAPSNKATAADSL
FDHQGFLKSRDRAYTKFYTHLTKTQIFSRFIEECSFVSDKDTGLAFFDDCIEKLFPDKGT
EKGEKVDVDSVEDTRLIELDESQKSEHTVFIMPPEPPADDGQDQVPKYSYKNFPRLDFKL
FDRPQELKLSFSRHPAGSSISNSPALMAKRTKQEIKTAHKLAKKYYVSPSQWAKCLFSHS
YSLWFICLPAYVRIVHPKVKALQQAYDVLIKMRKTEVEPLDEVCYRVVMQLCGLWGQPVQ
AVRVLFEMKNAGIQPNAITYGYYNKAVLESSWPSGNRSGIFLWTKVRNVVHGTVQFRQCL
KKSMQSPQVPVIPGGQSDQGYRSKDEILRDGEGSLPATETQVEKDCSYSALVKKSYEKQQ
LNIETQSPADPPAWGNSIVKVPSGIFDSSGRKSSDETVSSPLFITQDSVEDTVFGNVSPK
KTSEKRQKRQKLFSERSCSFSSESRAGMLLKKGSLDLHSKEIAIMMGADAKILTAALSGT
KTSPKSHSFENVTDQQVSDISGTWSGVTQSDWDLEHRSSPVLEEPGEGQEDLENGRDGNM
TTVEDINLEQSVESKNQKPESKDATAKRNSFYGVVKPIEREDVEVGLDPLSLLATDSTQR
GYPEPGEKLMSPVAARNLADEIESYMNLKNPLGSKFPSMELHKPDKEAEASSTLGHSQER
RSSLPLDPILPSSKCYESRRSPSVCRSKTFTVRSKQQTHPQVQKERSSSLTGLARSSPHG
SLGTVVTTLSSLKLDNILSGPKIDVLKSGMKQAANVASKMWGVVTSAYSYSDDEEESHRP
DYNFPVGFEDSILGDNLSSRTGVSGLLTNELAQSTTSLGSSSSGGDVGRQHFSAGEVSFP
KSMKLLDSEKSEHSSSHNTSLSSIFQNYAMEVLMSSCSQCRACDALVYDEEIMAGWTADD
SNLNTTCPFCKSTFLPLLNVEFKDLRGSASFFLKQSTSGDSLQSGTLPLTTDPLEQKLLT
SPAVADLISFSDHLQSSHTIAEETSSAAEQGDLAEEQTTDPTTMNIHASNPPKRGVSLTR
SHSVGGPLQNIDLSQRPSHGISTVSLPNSLQEAVDPLIKQQNPAPVSVPYLSPLVLRKEL
ESLLENEGEQVIHTSKFINQHPIIFWNLVWYFQRLDLPSNLPGLILTSEHCNEGVQLPLT
SLAQDSKLVYIHLLWDNINLHQEPGEPLYMSWRNLNSSEKKPSTLAEDQQATSTLLENIK
LSIQHNDVMKPINLLLQKVKPDVKRQRSFYREILFLSLVSLGRENIDIEVFDSEYRLALK
KLPEEILEKMQRIDVPPSSRVECCRKWFGAPLI
NT seq
5682 nt
NT seq
+upstream
nt +downstream
nt
atgatagaagacaaaggtccacgagtggctgactatttcgtagtggcagggctcaccgat
acagacacagcaaccctcctggaccaagaaatcagccgacatgaaacgaagtcaactggt
cccaaggctccaattactgacattgctgtgataattaaatcagctggtgaaactgtccca
gagggatatacctgtgttgaggccacccctacagccctccaagccaacttaaactatgga
agtctaaagagtcctgaactttttctgtgctacaagagaggccgagacaaaccacctctt
actgacatcggagttctctacgaagggaaggatcgtataatttcgggctgtgaagtgatt
caagctactccgtatggtcgttgcgctaatgttaacaacagctcggcttcttcacaacgc
atcttcatcacctaccgaagggcccctccagtgcgaccccagaattcactggcagtgaca
gatatctgtgttattgttactagcaaaggggaaacccctcctcacacattctgtaaagtg
gataagaatttaaattgcggtatgtggggttccagtgtatacctttgttacaagaagtct
gtgcctgcttctaactctttagcatataaagctggcttacttttcagatatcctcaagag
aactatgagtcatttccactgtcagactctgtacctctcttctgccttcctatgggagct
actattgaatgctgggaccctcaaaccaaatatccactaccagtgttctcaacatttgta
ctgacctgctcttcagcggaaaaggtttatggtgctgctatccagttttatgagccttat
ccccgggagctgctaacagaaaaacagcaatcacagctgggtcttctgacgactgtagag
agaaaagtgattacttccaagtccatcaattcaaacaaatgcatctgtcttctctcacac
tggcctttctttgaagcatttcgaaaatttcttatgttcatctacaaactctctgtctct
ggacctcatcctcttcccattgaaaagcatatatcccattttatgcacaatatacctttc
ccttcaccacaaaggccaaggattcttgtgcagctttctgcccatgatgcattaatattg
tcacagccagtttctacaccattgccattaagtggagcaaactttagcactctactcatg
aatcttggaccagaaaactgcgccactctgttactgtttgtattactagaaggcaagatc
ctcctccattcccttagaccggctgtgttgacaggagttgctgaagctgtagtagctatg
atatttccatttcagtggcaatgtccatatatccccctctgtcctttgtctctggccacc
gtactcagtgcacctcttccatttattgttggagttgattcacgatactttgatctgtac
gatccaccacaggatattgtgtgcattgacttagacacaaacatggtctacatatcggat
gataagaagaacaccaactggaagcagtttcctaaaaagccatgtaaaagtcttctcagc
tccttaaagaaactgcacccacagcttgcagcagttcacaggaagactcaagaaggctct
gcagtggaaatgactcctatagaggcagatttctcctggcagaagaagatgatagaactt
gagatgttgatccaggaagcatttctccgtttcatggcatctattttgaagggttacaga
acattcctcaagccaatcacacaggcaccttcaaataaagcaactgctgctgattcattg
tttgatcatcaaggatttttaaaaagcagagaccgggcctatacaaagttttacacgcat
ctcaccaagacacagatattcagccgctttattgaagagtgcagttttgtgagtgacaag
gatactggcttggcattttttgatgactgcatagaaaagctctttccagataaaggaacg
gaaaaaggagagaaggttgatgtagattctgttgaagatacacgcttgattgagcttgat
gagtcacaaaaaagtgaacacacagtgttcataatgccaccagaaccacctgctgatgat
ggacaggaccaagtgccaaaatacagctataaaaacttcccacggctagatttcaagctc
tttgacaggccacaggagctcaagctctccttcagcagacacccagctggaagcagcatt
tcaaatagtccagctctcatggcaaagaggacaaaacaggagataaaaacagcccataaa
ttagccaagaaatattatgtaagcccctcccagtgggctaagtgtctcttcagtcatagt
tacagcctatggtttatttgcctgccagcctatgtcagaattgtacatcccaaggtcaaa
gcactgcaacaggcatatgatgttctgattaaaatgaggaaaaccgaagtggaaccacta
gatgaggtctgttatagagtagtaatgcagctctgtggactgtggggtcagcctgttcag
gctgtgagagttctttttgaaatgaaaaatgctggaatacagccaaatgccatcacctat
ggttattacaataaggcggttttagagtcttcttggcctagtggtaaccgcagtggcata
ttcctgtggacaaaggtacgaaatgtagttcatggcacagtgcagtttaggcagtgcctg
aagaaatcaatgcagagcccacaagtgcctgtgataccaggtggtcagtcagaccagggt
tacagatccaaggatgaaatcttgagagatggtgagggcagtcttcctgcaactgaaaca
caagtagagaaagattgttcttattctgctttggttaaaaaatcttatgaaaagcaacag
ctgaatatagaaactcagagtccagctgatccacctgcttggggtaacagtattgtgaaa
gttccatcaggcatttttgatagcagtggaaggaagagcagtgatgaaacagtttctagc
ccactgttcataactcaggattcagtcgaagatacagtctttggtaatgtttctcctaag
aagacaagtgaaaaacgacagaagagacaaaaactgttttcagagagaagctgcagtttc
agtagtgaaagcagagctggaatgctgctgaaaaaaggcagcttggacttgcattctaaa
gaaatagcaataatgatgggagcagatgccaagatcttaacagcagctttatctgggacc
aaaacttcacctaaatcccacagctttgaaaatgtcactgaccagcaggtttctgacata
agtggcacttggagtggtgtgactcagagtgactgggacctagaacataggtcttcacca
gtgctggaagaacctggggaaggacaggaggatcttgagaacggaagagatggaaacatg
actacagtggaagacataaatcttgaacagtcagttgagtctaaaaaccagaaacctgaa
tccaaagatgcaactgctaaaagaaatagcttttatggagtggttaagcctattgaaagg
gaagatgttgaagtaggcttggaccctctgtctttgctagctactgacagcacacaacga
ggttatccagaacccggggaaaagttgatgtcaccagttgcagcacgtaatttggcagat
gaaatagagagctatatgaatttgaagaaccccttgggtagtaagtttcccagcatggaa
ctgcacaagccagataaggaagcagaggcttctagtacacttggccactcccaagaacga
aggtcaagcctgcccttggatcccatcctgccgtcctccaagtgttatgaaagtcgaaga
agtccttctgtctgcagatccaaaacattcactgtacgatcaaagcaacaaactcaccca
caagttcaaaaggagcgttcgtcgtctttgacaggactggctcgttcttccccgcatggc
tcattgggaactgttgtaacaactttatccagtctgaagttagacaatatactgtctgga
ccaaaaattgatgttttgaaatcaggcatgaagcaggctgccaatgtggccagtaagatg
tggggagtggtaacatcagcatatagttactcagatgatgaggaagaaagccatcgacca
gactataacttccctgtgggctttgaagatagtattttaggagataatctatcatcaaga
actggagtctcaggcctacttacaaatgagcttgcacaaagcactactagtcttggtagt
agcagcagtggtggagatgtaggaagacagcatttcagtgcaggtgaagtttcattccca
aaaagtatgaaacttctagattctgaaaaatcagagcacagctcttcacataatactagt
ttatccagcattttccagaactatgcaatggaggtcttgatgtcaagctgctctcaatgt
agagcttgtgatgctttggtttatgatgaagaaatcatggctgggtggacagcagatgac
tcaaacctgaacactacctgccctttttgtaaaagtaccttcctacctttgcttaatgtt
gaatttaaagaccttcgtggctctgcaagctttttcctgaagcaaagtacctcaggagat
agtttacagagtggcacccttccattaaccacagatcctctggagcagaaactgttgacc
agtccagctgttgctgacttgatcagtttttcagatcacctgcagtccagccacaccata
gctgaagaaaccagctctgcagctgagcagggtgatttggcagaagaacagactacagat
cccaccaccatgaacatacatgccagtaatcctccaaaaaggggcgtgtccttgactcgg
agccacagtgtgggaggtccactgcaaaacattgatctctcccagagaccgtctcatggc
atttcaacagttagtctgcccaatagtttgcaggaagctgtggatcctttaataaaacaa
cagaaccctgcccctgtatctgtgccctacttgagccctttggtactgcgtaaggagctt
gaatcactcctggagaatgagggagagcaagtaattcatacatccaaattcatcaatcaa
caccccataatcttctggaacctagtctggtatttccagcggttggatctgcccagcaac
ttacctggactcattctgacatctgagcactgcaatgagggagtgcagcttcctttgaca
tctcttgctcaagatagcaagctggtatacattcatcttctatgggacaatatcaacctc
caccaagagccaggggagcccctatatatgtcttggagaaatctcaattcttctgaaaag
aaaccctccacactggcagaagatcagcaggcaacaagcacattgttagagaacatcaaa
ctaagtattcaacacaatgatgttatgaagccaatcaacctcctcctacagaaagttaag
ccagatgtgaaacgacagaggagtttttacagggaaattcttttcctctctctggtgtct
cttggaagagaaaacattgacattgaagtctttgatagtgaatacagacttgcacttaaa
aaactaccagaggaaattcttgaaaagatgcagagaatagatgttccaccaagcagcagg
gttgagtgttgcaggaagtggtttggagcacctttaatataa
DBGET
integrated database retrieval system
