KEGG   Geospiza fortis (medium ground-finch): 102043301
Entry
102043301         CDS       T03755                                 
Symbol
KDM4A
Name
(RefSeq) lysine demethylase 4A
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
gfr  Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:gfr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:gfr03036]
    102043301 (KDM4A)
Enzymes [BR:gfr01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     102043301 (KDM4A)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     102043301 (KDM4A)
Chromosome and associated proteins [BR:gfr03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    102043301 (KDM4A)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 PHD_2 zf-HC5HC2H PHD DUF7141 LBR_tudor DUF4537 Rad9_Rad53_bind Tudor_5 53-BP1_Tudor
Other DBs
NCBI-GeneID: 102043301
NCBI-ProteinID: XP_014163365
UniProt: A0A6I9Z6F9
LinkDB
Position
Un
AA seq 957 aa
MTVREFRRIANSDKYCTPRYTDFEDLERKYWKNLTFNAPIYGADVNGTLYDKHVDAWNIG
RLNTILDIVENESGITIEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSI
PPEHGKRLERLAKGFFPGSAQSCEAFLRHKMTLISPSILKKYGIPFDKVTQEAGEFMITF
PYSYHAGFNHGFNCAESTNFATLRWIEYGKQSVLCSCRKDMVKISMDVFVRKYQPDRYKL
WKAGKDVTVIPEAAEFLKGDLMQKVKSGKQCAEEMETEEMCKEEVDGNETKSIPKHRIGT
KRHRVCLEVPQEVSESEAFPKEELSSTQCEADMAEPREMSTSEFVQQGEQRIKLPDRVDS
AKFEELKPVKLEEEEQEAAALDLSISHASNSTSVLPASKQSATSSVQSSSPSYSSDSESC
DVLAKRTVPGPAGVFTVHSYAKGDASGSDSEHTSGRKATASSSVSEQELTEVGKEYLSSV
KESKKSKGRRQPLSKLPRHHPLLVKDCISDDEASEQLTPEEEAEETEAWAKPLSQLWQNR
PPNFEAEKEYNRSMAQQPPYCAVCMLFQAYQAECEGSSQNSGVTPAAADGKIRTKPLIPE
MCFTATGCSTDLNLSTPYLEEDGTSVLITCKNCHVCVHASCYGVSPDKATEDWMCSRCTE
NALEEDCCLCSLRGGALQRANDDKWVHVMCAVAVLEAKFVNIAERSPVDVGKIPLQRFRL
KCIFCKKRRKRIAGCCVQCSHGRCPTSFHVSCAQAAGVMMQPDDWPFVVFITCFRHKTPS
QAERAKAALQDLSPGQIVISKHKNGRFYQCEVVSLAKETFYEVNFDDGSFSDNLYPEDIV
SRDCLQLGPPAEGEVVQVRWTDGQVYGAKFVASHAIQMYQVEFEDGSQLMVKRDDVYTLE
EELPKRVKSRLSIASDMRFTEIFEEKEVSQERKRQRVINSRYREDYIEPALYRAIME
NT seq 2874 nt   +upstreamnt  +downstreamnt
atgacggtccgcgagttccgcaggatcgccaacagtgacaaatactgcaccccccggtac
acagattttgaagaccttgaacgaaaatactggaagaaccttacgttcaatgcccccatc
tacggggctgacgttaatggcacgctctacgacaagcatgtagatgcgtggaatatcggc
agattgaacacaatcctggatattgtggagaatgaaagtggcataaccattgaaggagtg
aatactccttacctatattttggcatgtggaaaacttcctttgcttggcacaccgaggac
atggatctctacagtattaattacttgcattttggggaacccaagtcatggtactccatc
cctccagagcatgggaaaaggctggagagacttgcaaaaggttttttcccaggaagtgcc
caaagctgtgaagcatttctccgtcacaagatgactctcatttctccatcaattctgaag
aaatatggaattccatttgataaggtgacacaggaggctggagagttcatgataaccttt
ccttatagctatcatgctggctttaaccacggctttaactgtgctgaatctaccaacttt
gctactcttcggtggattgagtacgggaagcagtcggtgctgtgctcctgtcggaaggac
atggtgaagatctccatggatgtgtttgtgaggaagtaccagccagatcgttacaagctt
tggaaagctgggaaggacgtgactgtcatcccagaggcagcagagttccttaaaggggat
ctcatgcaaaaagtcaagagtgggaaacagtgtgctgaggagatggaaacagaagagatg
tgtaaagaggaggtggatgggaatgagacaaaaagcatccccaagcaccgcataggaaca
aaaaggcacagggtctgcctggaagtgcctcaggaggtgagtgagagtgaggccttccct
aaggaggagctgagctccacacagtgtgaagcggacatggcagagcctcgtgagatgtcc
acgagtgaatttgtacagcaaggtgaacaaaggatcaaacttccagatcgtgtggactcg
gccaaatttgaagaattgaaaccggtgaagcttgaggaagaagaacaagaagcagctgca
ctggatctctccatttcacatgcttcaaattccacttcagtgttgccagcctcaaagcag
agtgctacatccagtgttcagtccagctcaccttcctactcttcagactcggaatcgtgt
gatgtgttggcgaagcgaacggttccggggccagccggggtgttcacagtgcacagttat
gccaagggcgatgccagcggctccgacagcgaacacacttcagggaggaaagccactgcc
agctccagtgtcagtgagcaagaactgacagaggtgggaaaggagtacttaagctccgtg
aaggagagtaagaagtccaagggtcgtcggcagcccctgagcaaactcccccgtcatcac
ccgctcctggtcaaagactgcatcagtgatgatgaggcatcagagcagctaactcctgaa
gaagaggctgaggagacagaagcatgggccaagccactgagccagctgtggcagaatcgg
ccgccaaactttgaggctgagaaagaatacaatcgcagcatggcgcagcagcccccatac
tgtgctgtctgtatgctcttccaggcatatcaggcagaatgtgaaggcagcagtcaaaac
tctggagtaactccagctgctgcagatgggaagatccgaactaaacccctgattcctgaa
atgtgctttactgcaactggctgcagcactgacctcaatctttcaactccctacctggag
gaagatggaaccagcgtactcatcacctgcaagaactgccatgtctgtgttcatgccagt
tgttatggtgtatcccctgacaaggccactgaagactggatgtgctcccggtgtacagaa
aatgcgttagaagaggactgctgtttgtgttccttacgaggaggagcgctgcagagagcc
aatgatgacaagtgggttcatgtgatgtgtgctgtggctgtactggaggcaaaatttgtg
aacatcgcagagcgaagtcctgtagatgttggcaaaatccccctgcaacgtttcagactg
aaatgcatcttctgcaagaaaaggagaaagagaattgcaggttgctgtgtacagtgttca
catggtcggtgtcccacatcctttcatgtcagctgtgcccaagcagcaggagtcatgatg
cagcctgatgactggccatttgttgtcttcattacctgcttcaggcataagactccatct
caggctgagcgagctaaggctgcactccaggatctgtcccctggacagatagtcatcagt
aagcacaagaatggtcgcttctatcaatgtgaagtggtcagccttgcaaaggagactttc
tacgaggtcaactttgatgatggctccttcagcgataacctgtacccagaggacattgtg
agtcgagattgtcttcagttaggtccccctgctgaaggggaagtcgtgcaggtgagatgg
acagatggacaagtttatggagcaaagtttgtcgcatcacacgctatccagatgtaccag
gtggaatttgaagatggttcacagctgatggtgaaaagggatgatgtatacactcttgaa
gaggagcttcctaagagagtgaagtcaaggctgtcaattgcttcagatatgcgcttcaca
gagatctttgaagagaaggaggtcagtcaagaaaggaagagacaaagagtgatcaattca
cgctaccgtgaagattatatcgaacctgccttgtaccgggccatcatggagtaa

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