Geospiza fortis (medium ground-finch): 102043444
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Entry
102043444 CDS
T03755
Symbol
ABCB11
Name
(RefSeq) ATP binding cassette subfamily B member 11
KO
K05664
ATP-binding cassette, subfamily B (MDR/TAP), member 11
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
102043444 (ABCB11)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gfr02000
]
102043444 (ABCB11)
04147 Exosome [BR:
gfr04147
]
102043444 (ABCB11)
Transporters [BR:
gfr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB11 subgroup
102043444 (ABCB11)
Exosome [BR:
gfr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
102043444 (ABCB11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
AAA_22
ABC_ATPase
Zeta_toxin
AAA_29
AAA_15
AAA_21
Rad17
Motif
Other DBs
NCBI-GeneID:
102043444
NCBI-ProteinID:
XP_005415894
UniProt:
A0A6I9HBH8
LinkDB
All DBs
Position
Un
AA seq
1351 aa
AA seq
DB search
MSDPVVLRSIKRLGEDNYAFDSDGKCNSFKKSGNFYASEEPFIEKKSEKSSKKKENSVHV
GFFQLFRFSSSMEILMMVAGTLCAIVHGVAQPAVLLVFGAMADTFIEYDIEMQELKDPNK
TCVNNTIVWINGTIHQNEKNTTIRCGLLDIEHEMTKFAGYYGGIGCAILVLGYLQICFWV
MSAARQIQKIRKAYFRKIMRMDIGWFDCTSVGELNTRISDDVNKINEAIADQVAIFIQRI
TTFVGGFLLGFVSGWKLTLVIIAVSPLLGVGAALYGLAVAKLTGRELKAYAKAGAVADEV
LSSIRTVAAFGGEKKEVERYDKNLVFAQHWGIRKGMIMGLFSGYMWCIIFLSYALAFWYG
SKLVLEEEEYSPGTLLQVFFGVLIGALNLGQASPCLEAFATGRGAATNIFETIDKKPTID
CMSEDGYKLDKVRGEIEFHNVTFNYPSRPDIKILDNLNMVIKAGETTAFVGASGAGKSTT
IQLIQRFYDPTDGMITLDGHDIRSLNIQWLRSQIGVVEQEPVLFATTIAENIRYGRDEAT
MEDIIQAAKQANAYNFIMDLPQKFDTHVGEGGSQMSGGQKQRIAIARALVRNPKILLLDM
ATSALDNESEAIVQEALHKARLGRTAISIAHRLSAIKAADVIVGFEHGRAVERGTHEELL
QRKGVYFMLATLQSKGDTAPNREETQTAENNVVEPNLENVQSFSRGSYQASLRASLRQRS
RSQLSNVVPDPPLSIGGDHAESTYLAPSYGEDDGKAKKESVVEEDAKPVPFTRILKYNAS
EWPYLVLGSLAAAVNGAVNPLYALLFSQILGTFSILDEENQKNQINGVCVLFVLVGVLSF
FTQFLQGYTFAKSGELLTRRLRKIGFQAMLGQDIGWFDDRKNSPGALTTRLATDASQVQG
ATGSQIGMIVNSFTNIGVAMIIAFYFSWKLSLVIMCFLPFLALSGAVQAKMLTGFASQDK
KALEATGRIASEALSNIRTVAGIGKEKMFIENFEKHLDMPYKAAIKKAHVYGICFGFAQS
IVFIANSVSYRYGGFLVAAEGLHYSFVFRVISAIVTSGTALGRASSYTPNYAKAKTSAAR
FFQLVDRLPKISVYSEKGEKWDDFKGSIEFLNCKFTYPSRPDIQVLKGLSISVKPGQTLA
FVGSSGCGKSTSVQLLERFYDPEKGSLLIDGHDSKNVNVQFLRSKIGIVSQEPVLFDCSI
ADNIKYGSNTKEATMEKVIEAAQKAQLHDFVMSLPNKYETNVGAQGSQLSRGQKQRIAIA
RAIIRDPKILLLDEATSALDTESEKTVQAALDKAREGRTCIVIAHRLSTIQNADIIAVMS
QGLVIERGTHDELMAMEGAYWKLVTTGAPIS
NT seq
4056 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacccagtagttctgcgtagcatcaagagactgggagaggataattatgctttt
gactcagatggcaaatgtaacagcttcaagaaatcaggaaatttctatgcatctgaagaa
ccttttatagagaagaaaagtgaaaagtcatcaaagaagaaagaaaatagcgttcatgtt
ggcttctttcagctgtttcgattttcatcatctatggagattttaatgatggttgctggt
actttgtgtgctattgttcatggagtggcccaacccgctgtgttgcttgtgtttggtgca
atggcagacacatttattgaatatgacatagaaatgcaagagcttaaagacccaaacaag
acatgtgtaaataacaccatagtgtggattaatggaactattcatcagaatgaaaagaac
accacaataagatgtgggctgctggacattgaacatgaaatgaccaagtttgcaggatac
tatggaggaattggttgtgccatacttgtgttaggatacctccaaatctgcttttgggtt
atgtctgcagctcgtcagatacagaaaatcaggaaagcttatttcaggaaaataatgcga
atggatataggctggtttgactgtacatctgtaggagaactgaacactcgaatttctgat
gatgttaacaaaattaatgaggctattgctgatcaagtagcaatcttcatccagcgcata
accacctttgtaggtggattcctcctgggatttgtcagtggctggaaactgaccttggtt
atcattgcagtcagccctctgcttggggttggagcagctctctatggcttggctgtggca
aaactaacaggccgagaattaaaggcttatgcaaaagctggagctgtggctgacgaagtg
ctctcatccatcagaacagtggctgcttttggtggggagaagaaagaagttgaaagatat
gataagaacttggtgtttgctcagcactggggaattcgaaaaggaatgataatgggatta
ttcagtggttacatgtggtgtataatttttctaagttatgcattagccttttggtatggc
tctaaacttgtccttgaggaagaagaatattcacctggcactcttctgcaggttttcttt
ggtgttttaataggagcattgaatcttggccaggcatctccctgtctggaagcctttgcc
accggtcgtggggctgcaacaaacatttttgagacaatagataaaaaacccaccattgac
tgcatgtcagaagatggctacaagctggataaagtacgaggggaaattgaatttcacaat
gtaacattcaattatccatccagaccagacataaagattttggataaccttaatatggtg
attaaagcaggagagacaacagcttttgttggagctagtggagctgggaaaagtacaaca
atacagctcatccagcgtttctatgaccccactgatggcatgattaccctggatggccat
gacatccgttccctgaatatccagtggctgcgctcacagatcggcgtagttgagcaggag
ccagtgctctttgccaccacgattgcagagaacattcgctacggccgggacgaggctacc
atggaggacatcatccaagcagccaaacaggccaatgcttacaatttcatcatggactta
ccacagaaatttgacactcatgttggagagggtggaagccagatgagtggaggtcaaaaa
cagaggatagctattgctcgagctttggtgcgaaaccccaaaatcctgctcctggatatg
gctacgtcagcactggataatgaaagtgaagcaattgtccaagaagcacttcataaggct
cggctcggccgcacggcgatctccatcgctcaccgcctgtccgccatcaaagccgccgac
gtcatcgtcggctttgagcacggcagggctgtagagagaggaactcacgaggaactcttg
cagaggaaaggggtttatttcatgttggcgaccttacaaagcaaaggagacacagcacct
aacagagaagaaacacaaacagcagagaataatgtggttgagccaaatcttgagaatgtt
cagtcattcagcaggggaagctatcaggccagtttgcgagcttcactccggcagcgctca
agatcccagctctctaacgtggtccctgaccctccactgtctattggaggagaccatgca
gagtctacctatcttgccccttcttacggagaagatgatggaaaggcaaaaaaggaatct
gttgtggaggaagatgccaagcctgtaccatttaccagaattttgaaatacaacgcctct
gaatggccatacctggtgcttggatctctggcagcagctgtgaatggagccgtcaatcct
ctctatgctttgttattcagtcagattcttgggaccttctccattcttgatgaagaaaac
caaaaaaaccagatcaatggtgtctgtgtgctctttgtcttagtcggagttctctcattt
ttcacacagtttctgcagggatacacctttgccaagtctggtgagctgcttacaagacgg
ttaaggaaaatcggtttccaggccatgctcgggcaagacattggttggtttgatgaccgg
aagaacagccccggtgctttaactaccaggcttgcaacagatgcctcacaggtccaaggg
gcaactggatctcagatagggatgattgtcaattcctttactaacatcggggtggccatg
atcattgccttctacttcagctggaaactgagtttggtaataatgtgcttcctgccattt
ttggctttatctggagctgtgcaggctaaaatgctgacaggatttgcctcgcaggacaag
aaagcactggaagctactggacggattgccagtgaagctctctctaacatcagaacagta
gctgggataggaaaagagaaaatgtttattgagaattttgagaagcacctggatatgccc
tacaaagctgcaatcaaaaaagcacacgtgtatggaatctgctttggctttgcccagagc
attgtgttcattgccaactccgtctcttaccgctacgggggatttctcgttgctgctgaa
gggctccattacagctttgtgttcagggtgatctctgcaattgtcaccagtggaactgcg
ttgggaagagcttcttcctacaccccaaactatgccaaagccaaaacatctgctgcacgc
ttttttcaactggttgatcggcttcctaaaatcagtgtttacagtgaaaaaggggaaaaa
tgggatgatttcaagggaagcattgaatttcttaactgtaaattcacatacccttctcgg
cctgatattcaggtcctgaaaggactctctatatctgttaaacctggacagactttggca
tttgttggaagtagtggctgtggtaagagcaccagtgtccaacttctggaacgtttctat
gaccctgagaaaggaagtctgttaatagatggacatgactctaagaacgtaaatgtgcag
tttcttagatcaaaaattggaatagtgtcacaggagcctgtgctatttgactgcagcatt
gctgataatatcaaatatggcagtaacacaaaagaagcaacgatggaaaaagtcatagaa
gcagcccagaaggctcaactgcatgattttgtcatgtctctgcctaacaaatatgaaact
aatgttggagctcagggatcccagttgtctcgtgggcaaaagcaacgcattgccatagca
agggccatcatacgagaccctaaaattttattactggatgaagcaacatctgccttagac
acagaaagtgaaaagactgtgcaggcagcactggataaagccagagaagggcgcacctgc
atcgtcattgcccaccgcttgtccaccatccagaacgctgacatcattgctgtgatgtcc
caaggacttgtcattgaaaggggcactcatgatgaactgatggccatggaaggagcctac
tggaaacttgttactactggagccccaattagctga
DBGET
integrated database retrieval system
