Geospiza fortis (medium ground-finch): 102043464
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Entry
102043464 CDS
T03755
Symbol
PHIP
Name
(RefSeq) pleckstrin homology domain interacting protein
KO
K11797
PH-interacting protein
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gfr04121
]
102043464 (PHIP)
Ubiquitin system [BR:
gfr04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
102043464 (PHIP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Bromodomain
NBCH_WD40
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
102043464
NCBI-ProteinID:
XP_014162544
LinkDB
All DBs
Position
Un
AA seq
1629 aa
AA seq
DB search
MKMHKRILGHLSSVYCVTFDRTGRRIFTGSDDCLVKIWATDDGRLLATLRGHAAEISDMA
VNYENTMIAAGSCDKMIRVWCLRTCAPLAVLQGHSASITSLQFSPLCSGSKRYLSSTGAD
GTICFWLWDAGTLKINPRPTKFTERPRPGVQMICSSFSAGGMFLATGSTDHIIRVYFFGS
GQPEKISELEFHTDKVDSIQFSNSSSRFVSGSRDGTARIWQFKRREWKSILLDMATRPAG
QSFQGVEDKITKLKVTMVAWDRHDNSVITAVNNMTLKVWNSFTGQLIHILMGHEDEVFVL
EPHPFDPRVLFSAGHDGNVIVWDLARGIKIRSYFNMIEGQGHGAVFDCKCSPDGQHFACT
DSHGHLLIFGFGSSSKYDKIADQMFFHSDYRPLIRDANNFVLDEQTQQAPHLMPPPFLVD
VDGNPHPARYQRLVPGRENCREEQLIPQMGVTSSGLNQVLSQQANQEISPLDSMIQRLQX
XXXXSGTSRISRGLRRSGQIEGVRQMHSNAPRSEIATERDLVAWSRRVVVPELSSGVASR
QEEWRTAKGEEEIRVYRSEEKRKHVMSHIPRENKIPTFSKNHSHDNLLDASDSKKQAANQ
HSYRTRYAAEETARPAEEVENGHSSSDEGEVVVASGGTSEDDERAWHSDGSSSDYSSDYS
DWTADAGINLQPPKKIPKIKTKKAESSSEDEEGPEKQRKQIKKERKKGIEEKDGPSTSPK
KRKPKERKQKRLAVGVLAENGLTLEEWLPSAWITDTVPRRCPFVPQMGDEVYYFRQGHEA
YVVMAKKNKIYNINPKKQPWHKMELREQELMKIVGIKYEVGLPTLCCLKLAFLDPDTGKL
TGGAFTMKYHDMPDVIDFLVLRQQFDDAKHRRWNIGDRFRSVIDDAWWFGTIESQEPLQP
DYPDSLFQCYNVCWDNGDTEKMSPWDMELIPSNAVFPEELGTSVPLTDDERRTLLYKPLD
GEWGSRARDEECDRIIAGINQLMTLDIASAFVAPVDLQAYPMYCTVVAYPTDLSTIKQRL
ESRFYRRLSSLMWEVRYIEHNTRTFNEPGSPIVKSAKFVTDLLLHFIKDQSCYDIIPLYN
AMKKKVLSDSDEEEEKDTNVPGTSTRKRKDHQPKRRLRNRAQSYDIQSWKKQCQELLNLI
FQCEDSEPFRQPVDLLEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNS
KAYTPSKRSRIYSMSLRLSAFFEEHISSILSDYKSALRFHKRNTIKKRRKKRSRSSSVSS
SVASSPERKRRLIKPHLKAETSATSSSPAPARSTALRHAPPQMNGKAAEAASLVRTRSNR
GTTDVAVTEQPSTSSGAKPLTIKPLITKPNTTAGSGKSVLENSTKHSKNQNIVSNPSPSD
YSHNTRNNSTKENPEKEKQIKRKVKSSTVNPQGKADCKNNALASGSIQVNGHGGQPLKPP
VKRGPGRKPKVETNNSSCEVVVHKKRGRKPKKLQTVEQQKVAEQNTIQTTRDIPEEASVS
TACNSLSENNVKEDLLQRKGRGGRKPKRKIKSRQPGSDLLAPANVKMQTRSRRKKTHEPM
EEGSEDLKDSEPHMRTRNQGRRTAFYNEDDSEEEQRQLLFEDTSLTFGTSSRGRVRKLTE
KAKANLIGW
NT seq
4890 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgcacaagcgaattttaggacacttatcttctgtatactgtgtaacttttgat
cgcactggcaggcgaatatttactgggtcagatgattgccttgtaaaaatctgggcaacc
gatgacggaaggttgttggctaccctgagagggcatgcagctgaaatatctgatatggca
gtaaactatgaaaacaccatgatagctgctggaagctgtgataaaatgatcagagtttgg
tgccttcgaacttgcgcacccttagcagtcctgcagggccacagtgcatctataacatca
ttgcagttctctccactatgcagtggctcaaagagatacttatcttcaaccggggcagat
ggaactatatgcttttggctgtgggatgctggcacccttaaaataaatccaaggccaacg
aagtttacagaacgtcctcggcctggagtccaaatgatctgttcttcttttagtgctggt
ggaatgtttttggccacggggagtacagatcacatcattagggtttatttctttggatca
ggtcagccagagaagatatcagaattggagtttcatactgacaaagttgacagcattcag
ttttctaatagtagtagcagatttgtgagtggaagccgtgatggaacagcacgaatctgg
caatttaagcgaagggaatggaaaagcattttgttagatatggctactcgcccagcagga
caaagttttcaaggagttgaagataaaatcacaaagctgaaagtgaccatggtggcatgg
gaccgccatgacaactctgttataactgcagtcaacaatatgacactgaaagtctggaat
tctttcactggccagctcattcacattctcatgggacatgaagatgaagtgtttgtgctt
gaacctcacccgtttgatccaagagttctcttctctgctggacatgatggaaatgtcata
gtttgggatttggcaagagggatcaaaatccggtcttacttcaacatgattgaaggacaa
gggcatggtgcagttttcgactgcaagtgctctcctgatggacagcattttgcatgtact
gattctcacggtcaccttctgatttttggctttggttccagtagcaaatatgacaagata
gcagatcagatgttctttcatagtgattatcggccccttatccgtgatgccaacaacttt
gtcctggatgaacagacacagcaggctccacaccttatgcctcccccatttttggttgat
gtggatggcaaccctcatcctgcaaggtatcaaagactagttcctggtcgtgagaactgc
agggaggaacagcttattcctcagatgggagtgacatcttcaggattgaatcaagttctt
agtcagcaagcaaatcaagaaatcagtccgttggatagcatgattcaaagacttcagnnn
nnnnnnnnnnncagtggtaccagccggataagcagagggttaaggcgcagtgggcaaatt
gaaggtgtgcgtcagatgcacagcaatgcacccagaagtgaaatcgccactgagcgggac
ctcgtggcttggagccgcagggtggtagtgcctgaattgtcttctggtgtggccagtagg
caggaagaatggagaacagcaaagggagaagaagaaataagggtgtatcgatcagaagag
aaaagaaaacatgtaatgagtcacattccaagagaaaacaaaatacctactttctctaag
aaccattctcatgataatttactagatgctagtgactcaaagaaacaagcagccaatcag
cacagctaccgtacgagatatgcagcagaagaaactgcaaggcctgctgaagaggtggaa
aatggacacagttcttcagatgaaggggaagtagttgttgccagtggtggaacatcagag
gatgacgaaagagcatggcacagtgatggcagttctagtgactattctagtgattattct
gactggacagcagatgcaggaatcaatttgcaaccaccaaagaaaattcctaaaattaaa
acaaagaaagcagaaagtagttcagaagatgaagaaggacctgaaaaacaaaggaagcaa
attaaaaaggaaaggaagaagggtattgaggagaaagatggaccatcaacatcaccaaag
aagaggaaacccaaagagagaaaacaaaagaggctggctgtaggagttctggcagaaaat
ggtttgacgctggaagaatggctgccttcagcatggattacagatactgttcctcggcgg
tgcccatttgtcccacagatgggagatgaggtttactatttccgacaaggtcatgaagca
tatgttgtaatggccaagaagaacaaaatttataatattaatcccaagaaacaaccgtgg
cataaaatggaattgcgggagcaagagctgatgaaaatagttgggattaagtatgaagtg
ggattgcctactctctgctgtcttaaactagcttttcttgaccctgatacgggtaaactg
actggaggagccttcaccatgaagtaccatgatatgccagatgtcatagatttcctagtt
ttgaggcaacaatttgatgatgcaaagcataggcgatggaatataggtgatcgtttcagg
tcagtgatagatgatgcttggtggtttggaacaattgaaagccaggaacctcttcaacct
gattatcctgatagcttatttcagtgctacaatgtctgctgggacaatggtgatactgag
aagatgagcccttgggacatggagctgataccaagtaatgctgtatttccagaagaactg
ggaactagtgttcctttaactgacgatgaacgtagaacgctgctctacaaacctttggat
ggagagtggggttccagggcccgagatgaggagtgtgacagaattattgcagggataaac
cagcttatgactctagatattgcttctgcatttgtggcaccagtggatcttcaggcttac
ccaatgtattgcactgttgtggcatatcccacagacctcagtaccatcaagcaaagactg
gaaagcagattttacaggcgcctttcttcattaatgtgggaagtgcggtacatcgaacac
aatactcgcacatttaatgaacctggaagtcctattgtcaaatctgccaaatttgtcaca
gatcttctgctacacttcataaaagaccagagctgctatgacataattccattatacaac
gcaatgaagaagaaagtgttgtctgactctgatgaggaagaagagaaagacacaaatgtg
ccgggtacttccactagaaaaagaaaggatcatcagccaaagcggcggttgcgtaatagg
gctcagtcatatgacattcagtcatggaagaagcaatgccaggagctgctgaatctcatt
ttccagtgtgaagactctgaaccatttcgacaaccagtggatcttcttgagtatccagat
tatagagatattattgacactcctatggactttgctactgttagagaaacactggaagct
ggcaactacgagtcaccaatggagttatgtaaagatgtgagacttattttcagcaattcc
aaggcctatacaccaagtaaaagatcaaggatctacagcatgagcttgcgcctttctgct
ttctttgaagaacacataagttctattttatcagattataaatctgccctacgctttcat
aaaagaaatacaataaagaaacgaaggaaaaaaagaagtagaagcagctcagtttccagt
agtgttgcatccagccctgaaaggaagaggagattaataaaacctcatctgaaggcagaa
acttctgccacttcatcatctcctgcacctgcacggtcgacagcactgagacacgctccg
cctcagatgaatggaaaagccgctgaggccgcctccctcgtgcggactcgaagcaacagg
gggacaacagatgtggctgtcacagagcaaccatccacttcttcaggagcaaagccttta
actataaagcctttaattacaaagcctaatactactgcagggtcaggaaagtcagtactg
gagaattcaaccaaacattccaagaaccagaatattgtatcaaacccttccccatctgat
tacagtcataacactaggaataactccacgaaagaaaatcctgagaaagagaagcaaatc
aagcgcaaagtaaaatcttccactgttaatccacaaggcaaggcagattgcaagaataat
gctttggcatcaggaagcattcaggtaaatggacatggaggacagcctttgaaacctcca
gttaaaagaggtcctggacgtaagcccaaggtggagactaataacagtagctgtgaagtg
gtggtgcacaagaaaagaggcaggaaaccaaaaaagctacaaactgttgaacagcaaaag
gttgcagagcagaacacaatccagaccacaagggatataccagaggaagcctctgtttct
actgcatgcaattctctttctgaaaataatgtgaaggaagacttgttacaaagaaaaggc
cgagggggtagaaagccaaaaaggaagataaagagtcgccagccaggctcagacctctta
gctcctgcaaatgttaaaatgcaaacaagaagcaggaggaaaaagacacacgagcctatg
gaggagggttctgaagaccttaaagattctgaacctcacatgagaactagaaaccagggt
aggaggacagccttttacaatgaagatgactccgaggaagagcaaaggcagctattgttt
gaagacacctccttaacttttggaacttcaagcagaggcagagtccgaaagttgactgaa
aaagcaaaagctaatttaattggttggtaa
DBGET
integrated database retrieval system
