Geospiza fortis (medium ground-finch): 102043511
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Entry
102043511 CDS
T03755
Name
(RefSeq) zinc finger RNA-binding protein-like
KO
K13203
zinc finger RNA-binding protein
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gfr03041
]
102043511
Spliceosome [BR:
gfr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
102043511
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DZF_N
DZF_C
zf-met
zf-C2H2_jaz
zf-U1
Motif
Other DBs
NCBI-GeneID:
102043511
NCBI-ProteinID:
XP_014166923
LinkDB
All DBs
Position
Un
AA seq
1021 aa
AA seq
DB search
QQPASGVAYSHPTTVASYTVHQAPVAAHTVTAACAPAAATVAVARPAPVAVAAAATAAAY
GGYPTAHTATDYGYTQRQQEAPPPPPPVTTQNYQDSYSYVRSTAPAVAYDSKQYYQQPTA
TAAAVAXGXXXQNSVAESYYQTAPKAGYSQGATQYTQAQQTRQVTAIKPATPSPATTTFS
IYPVSSTVQPVAAAATVVPSYTQSATYSTTAVTYSGTSYSGYEAAVYSAASSYYQQQQQK
QAAXAAAAATAAWTGTTFTKKIPFQNKQLKPKQPPKPPQIHYCDVCKISCAGPQTYKEHL
EGQKHKKKEAALKASQNTNNNSTSARGTQNQLRCELCDVSCTGADAYAAHIRGAKHQKVV
KLHTKLGKPIPSTEPNVVTQAATSTSTSASKPTASASNISTSSSTVNSSVASSTVKILTP
TANAPLNTVSNNKTSSTAANIAVKKISPPKINFVGGNKLQTTGSKLEEMKSAENIKATTA
ATIQTQEVKPDTAAEPVTPTTLAALQSDVQPVGHDYVEEVRNDEGKVIRFHCKLCECSFN
DPNAKEMHLKGRRHRLQYKKKVNPDLQVEVKPSIRARKIQEEKMRKQMQKEEYWRRREEE
ERWRMEMRRYEEDMYWRRMEEEQHHWDDRRRIPDGGYPHGPPGSLGLLGVXXXPPQPQGP
APLRRPDSSDDRYVMTKHAAIYPTEEELQAVQKIVSITERALKLVSDNMTDHEKSKSKEG
DDKKDSSKDRALKGVLRVGVLAKGLLLRGDRNVNLVLLCAEKPSKMLLGFIAESLPKQLA
VISPEKYDIKCAVPEAAIILNSCVEPKMQVTITLTSPVIREENVRDRDVTSGMVKDPPDV
LDRQKCLDALAALRHAKWFQARANGLQSCVVIIRILRDLCQRVPTWSDFPSWAMELLVEK
AISSATGPQSPGDALRRVFECISSGIILKGGPGLLDPCEKDPFDTLAVMTDQQREDITSS
AQFALRLLAFRQIHKVLGMDPLPQMNQRFSIHNNRKRRRDSDGVDGFEAEGKKDKKDYDN
F
NT seq
3067 nt
NT seq
+upstream
nt +downstream
nt
ccagcagccagcttcaggcgtagcttattcccatccaactacagttgccagctacactgt
ccaccaagcaccagttgctgcccacactgtcactgcagcctgtgctccagcagcagctac
agttgcagtagccaggcctgctccagtagctgttgcagctgctgcaacagctgctgctta
tggaggctatcctacagcgcacacagctacagattatggttatacacagaggcaacaaga
agctccaccaccaccacctcctgtcactacgcagaattaccaggattcctattcttatgt
tcgatctactgccccagctgtagcttatgacagcaaacaatattatcaacaaccaacagc
aactgctgcagctgtggctnggggnnnnnnnnnncaaaattcagtggctgagtcatacta
ccagacagctccaaaagcaggatatagccaaggagcaactcagtatacccaagcccagca
aacacgacaagtgacagctataaaacctgcaaccccaagtccagcaacaactacattttc
tatatatccagtatcttctactgtgcagccagtagcagctgcagctactgttgttccatc
ctatactcaaagtgcaacatacagtacaacagcggttacttactctggtacctcttattc
tggctatgaagctgcagtgtattcagctgcatcatcgtattaccagcagcagcagcagaa
acaggcagcannagctgctgctgctgcaacagctgcttggacagggaccacctttaccaa
aaagataccattccaaaataagcaactgaaaccaaagcaacctcccaaaccaccccagat
ccactactgtgatgtttgcaagatcagctgtgctggaccacagacttataaagaacactt
agaaggccagaaacacaaaaagaaagaagcggcattaaaagcttcccagaacaccaataa
caacagtacttctgctcgtggaactcagaatcagttgcgctgtgagctttgtgatgtgtc
ttgtacaggagcagatgcttacgctgcccatatccgtggagccaaacatcagaaagtagt
aaagttgcacacaaaacttggcaaacctattccatcaactgaaccaaatgtggttaccca
agctgcaacttcaacatccacatctgcttctaaaccaactgcttctgcttcaaatatatc
aactagcagcagtactgtgaactcctctgtcgcatcctctacagtgaaaattcttactcc
cacggcaaatgcaccacttaacactgtgtccaacaacaaaacatcttcaaccgctgctaa
tatagctgtaaagaaaatatctccaccaaaaataaactttgttggtggtaataaacttca
gacaacaggaagtaaactggaagaaatgaaatcagctgaaaatattaaagccacaactgc
tgctacaatacaaacacaggaagtaaaaccagacacagcagctgaaccagtgacacctac
gactcttgctgccttgcaaagtgatgtccagccagtgggccatgactatgtggaggaggt
aagaaatgatgaaggaaaggtgatccgctttcactgtaaactttgtgaatgcagttttaa
tgatcctaatgccaaagagatgcacttaaaagggaggcggcacagacttcagtataagaa
aaaagtaaaccccgatttacaagtagaagtaaagcccagtattcgagcaagaaaaattca
ggaagagaagatgagaaaacagatgcagaaagaagaatactggagaaggcgagaagagga
ggaacgctggaggatggaaatgaggcgatatgaagaggacatgtactggaggagaatgga
ggaagagcagcatcactgggatgaccgtcgcagaataccagatggaggatatcctcatgg
tcctccaggatctctaggcctgctgggagtnnnnnnnnnncctcctcagccccaaggacc
agctcctctacgccgccctgactcctctgatgaccgctatgtgatgaccaaacatgcagc
tatatatccaacagaggaggaacttcaagcagtccaaaaaattgtctctattactgagcg
tgctttgaaacttgtttctgacaatatgactgaccatgaaaaaagcaagagcaaagaggg
agatgacaaaaaagacagcagtaaagacagagctttgaaaggagttttacgggtgggcgt
tttggctaaaggtttgttactccgtggagaccgaaatgtcaatcttgttttgttatgtgc
tgagaagccttcaaagatgttacttggttttattgctgaaagtcttcccaaacaacttgc
agtaataagtcccgagaaatatgatatcaagtgtgcagtcccagaagcagcaataatttt
aaattcatgtgtggaacccaaaatgcaagttactatcacactgacatctccagtcattcg
ggaggagaacgtgagggatagagatgtaacctcaggtatggtgaaagacccaccggacgt
cttggacaggcaaaaatgccttgatgctctggctgctctacgccacgctaagtggttcca
ggctagagctaatggtctgcagtcctgtgtggttatcatacgtattcttcgtgacctctg
tcagcgggttccaacttggtctgattttccaagctgggctatggagttgcttgtggaaaa
agcaattagcagtgctactggaccacagagtcctggggatgcactaagaagagtttttga
gtgtatatcttcaggaatcatccttaaaggtggtcctggccttctggacccttgtgagaa
agatccttttgatacacttgctgtaatgacagatcagcaacgagaggatattacttcaag
tgcacagtttgcgctgagactccttgcattccgtcaaatacacaaagttttaggaatgga
tccattaccacagatgaatcaacgcttcagcattcataataatcgtaaaagaagaaggga
cagtgatggggttgatggatttgaagcagagggaaaaaaagacaaaaaagattatgataa
cttttaa
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