Geospiza fortis (medium ground-finch): 102043607 Help Entry 102043607         CDS       T03755                                  Name (RefSeq) protein dachsous-like   KO K16494   protocadherin beta Organism gfr  Geospiza fortis (medium ground-finch) Brite KEGG Orthology (KO) [BR:gfr00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:gfr04515]     102043607 Cell adhesion molecules [BR:gfr04515]  Cadherins   Protocadherins    102043607 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Cadherin Cadherin_2 Cadherin_C_2 Cadherin_CELSR2_9th Motif Other DBs NCBI-GeneID:  102043607 NCBI-ProteinID:  XP_014166781 LinkDB All DBs Position Un AA seq 1636 aa AA seqDB search MACGRRSGDRKRQVILFILCVCVCQSGAETLRYSLPEEMERDSFVANIAKDLGVPLSQLA ARKARVVSEGNEQLFRLNQNTGVLTAKESLDREEICPQSDTCTLVFKIFFENPLQLIRGE VEVRDVNDNSPVFPEKEMVLKILETASPGSRFPLESAQDKDVGINGLQNYSLGPNPHFSL ALGTGKNGVKYVELVLQRQLDREEQGELNLLLTATDGGSPPRSGTAQVRIVVVDANDNIP VFERETYEVRLAENSPLEQLVVRVAAADPDEGSYGEVRYAFAQASERSRQLFQLNRTTGE IRVAGKLDFEEAKSHKMVVKATDGGGLSGHCKVQVEVLDVNDNAPEIALTSLSASIPEDA PPRTVVALFSVRDRDSGDNGRTECSIDGDLPFSLAPTFDNYYELRTNAALDRERTAEYNI TITATDWGRKRLSSQESIFVQISDVNDNPPEFTQEVYTMSVTENNSPMLRIGSMKATDAD AGINARVNYALVRQEGKEQPEVSVNSDNGDVYILRPLDYEKVRSFEAEVAFSITAVDGGT PPRSGTALIRVVVLDINDNTPVFTQTLYKVSVMENSSEDTIVVTGRIRLKKPLDYEEKKT YEIDVQATDGGGLSTHCKVEVQVKDVNDNAPEVIITSLTSTLSEAAPPDTVVALFNVRDR DSGDNGRTTCELTGEQPFRITVLAADAYALVTSETLDREQAEEYNVTVRARDEGSPALSA SKTLLVRLLDVNDNAPTFTQAIYTMVMSENEPAGRSLGRLSATDPDAGENARAEEEMLTT YLIASLVCVSSLFLLSVLALTANTLCRARVRAELPPPSPSCYVDGDFGSDGVGVGTMGTL SPAYRYEMCLTSGSGRSEFQFLRPILPSLPNKAEAGLDKDEEPLRHSQPACERETHPGRL VVAGRLDREELCAQSDTCMLPFELLLSNPLQFFQVEVTLKDINDHSPVFPEERVIFDIPE TSEPGSRFPLEVARDLDIGSNTIQEYSMAPKNDFFKLSYGGRITGKKYLELVLEKPLDRE EQAEMEFSLIAVDGGSPPRSGTTQVKILILDVNDNAPIFTEEEYIGQVLENRPEGSVVLT VLATDPDAGVNGDISYQFSQAVGQGDSAFVIDPITGEIKLTKPLDFETAHTHELTVRARD GGGLSAICKVLVEVVDVNDNAPELVVSSFSSPLPENTVPGTVVALFTVRDRDSGANGKIS CALRDQLFFSLRPAYKNYYELVTVSALDREETPQYILSVTAADAGSPPLTTTQTFTVDIS DVNDNAPVFNQTSYTMYVRENNVPTVFVGAVSAADADVGLNAKVTYSLAAEQGPERPWCS CISVNSENGHVFVLRPLDYEHLRQTEVTVSASDAGSPPLRANVTVRLVVLDENDNAPLVL YPAQESSPASSELVPVSAEAGYLISKVVAVDADSGQNSWLSYHLLRATDPGLFSVGLQSG EVRLRRPVTERDSVKQKLLVLVRDNGKPPLSATAALSALLLKDFAAVRLPHSSPASEDQA ASLTTYLIIALVFVSLLFLISTAVLVARKVCRRKELKAGHVLYAADTLQSGPADAAAAGT LPRAYCYEINLTTGSGNSEFRFLKPILPSLPPQHCAVGQGPEEEQDFSGVPVSTEDMAPD NAGALSAGQFNALSFS NT seq 4911 nt NT seq  +upstreamnt  +downstreamnt atggcctgtgggagacggagcggagacagaaagaggcaagtgatcttgtttattctgtgt gtttgcgtgtgccagagcggggctgaaaccctccgctactccctgccggaggaaatggag agggactcctttgtcgccaatatcgccaaggacctgggggttcctctgagccagcttgcg gctcgcaaagcccgcgttgtgtccgaggggaacgagcagcttttccgactcaatcaaaac accggagtcctgacggcaaaggagtcgctggaccgagaggagatctgtcctcagagcgat acctgcacgctcgtctttaagatattctttgaaaatccgttgcagctcatccgaggggag gtggaagttcgtgacgtaaatgacaactcgcccgtgttcccggagaaggagatggtttta aaaattctagaaacagcatctcctggctcccgtttccccctggaaagtgcccaggacaag gacgtgggcattaacggtttgcagaactacagcctcgggcccaatcctcatttctccctc gctctgggaacaggaaaaaatggcgtaaaatacgtggagctcgtcctacagcgtcagctc gatcgtgaagagcagggagagctgaatttacttctgaccgccaccgacggagggtcacca cccaggtcgggcacggctcaggtccggatcgtggttgtggatgccaatgataacattcct gtcttcgaaagggagacctacgaggtgcgcctggctgagaacagccccctggagcagctg gtggtcagagtcgctgccgcggatcccgacgaagggtcctacggggaagtgcgttatgcc tttgcccaggcatcggagcgatcccggcagctcttccagctgaaccggaccaccggtgaa atacgagtcgcaggcaagctggattttgaagaagcaaaatcacacaagatggtggtgaaa gccacggacggcggagggctgtctgggcattgcaaagtgcaggtggaggttctggacgtg aatgacaacgcgccggagatagcgctcacctccctcagcgcctccattcccgaggacgcc ccgccacgcaccgtggtggctctgttcagtgtgcgggaccgggactccggggacaacggc aggacggagtgttccatcgatggggacttgccgttcagtctcgcccccacttttgataat tactacgaactgagaacaaacgcggctctggacagagagaggacggcggagtataacatc accatcacagccacggactggggtaggaagcggctgagctcccaggaaagcatcttcgtg cagatctcggatgtgaacgacaaccccccagagttcactcaggaggtttacaccatgtct gtcacagagaacaacagccccatgctccgcatcggcagcatgaaggccacggacgccgac gcaggaataaatgcccgtgtgaattacgcactggtgaggcaggagggcaaagagcagccc gaagtgtcagtcaactctgataacggggatgtttatatcctccgcccgctggactatgag aaggtgcgctccttcgaggcagaagttgctttcagcatcacggctgtggatggtgggact ccaccgcggtctggcacagctttaatccgcgtagtagtcctggatataaacgacaacacc ccggtatttacccagactctgtataaagtctctgtaatggaaaatagctcagaggacacc atagtggtgacaggccgaattcgactcaaaaagcctttggattatgaagaaaaaaagacc tatgagatagacgtccaagccacagatggagggggcctgtccacgcattgcaaggtggag gtgcaggtgaaggacgtgaacgacaatgcccccgaggtgatcatcacctcgctcaccagc accctctccgaagccgccccgccggacaccgtggtggccctcttcaacgtgcgggaccgg gactcgggggacaacggcaggacgacctgcgagctgacaggagagcagcccttcaggatc actgtgttggcagccgacgcgtacgcgctggtgacatcagagacgctggaccgggagcag gcggaggaatacaacgtgacggtgcgagctcgagacgagggctctcccgccctctcggca tccaaaaccctgctcgtgcggctcttggatgtgaacgacaatgcacccaccttcacccag gccatttacaccatggtaatgagcgaaaacgagcccgcggggaggagccttggccgcctc agtgccacggaccctgacgcgggagagaacgcccgcgccgaggaggaaatgctcaccact tacctcatcgcctccctggtctgcgtctcgtcccttttcctcttgtccgtcctcgcctta acggcgaacacgctctgcagagctcgcgtccgggcagaacttcctcctccctctcccagc tgctacgtggacggagacttcggcagcgacggcgtgggcgtgggcaccatgggcactctg tcgccggcttaccgctacgaaatgtgtctgaccagcggctcggggaggagcgaattccag ttcctgaggccaatcctgcccagccttcctaacaaggctgaggcagggctagacaaggac gaggagccgctacgccactcgcagcccgcctgcgaacgggaaacccaccccggccgcctc gtcgtggcggggaggctggaccgggaggagctgtgcgcccagtccgacacctgcatgctc cccttcgagctgctgctctccaaccccctgcagttctttcaggtcgaggtgactctgaag gatatcaatgatcactcgcctgtcttccccgaggaacgagtcatttttgacatcccggaa accagcgagccaggctctcgtttcccactggaggtggctcgggacctcgatattggcagc aacacaatccaggagtacagcatggctccaaagaatgacttttttaagctctcctatgga ggtcggattacaggcaagaaatatctggaactggtcttggaaaagccactagacagagag gagcaggcagagatggagttcagtctcattgcagtagatgggggctcccctcctaggagt ggcaccactcaagtgaaaattctcattctagatgtaaatgacaatgctccgatattcact gaggaggagtacattggacaggttctagagaacaggccagaaggctctgtggtactgact gtgctggcaactgatccagatgcaggagttaatggggacatctcctatcaattcagccag gcagtgggacagggtgactcagcatttgtgattgatcccattactggggaaattaaactc acaaaacccctggactttgagacagcacacactcacgagctcactgtaagggccagagat ggaggagggctctcagcaatctgcaaggtgttggtggaggtggtggatgtgaatgacaat gccccagagctggtggtcagttccttcagcagtcccctccccgagaacacagtgcccggc acggtggttgccctgtttacggtcagggaccgggattctggtgccaatgggaagatctcg tgtgccctgcgggatcagctcttcttctccctgcggccagcctataagaattactatgag ctggtgacagtgagcgcgctggaccgcgaggagacgcctcagtacatcctcagtgtgacg gcagcagatgcgggctcgcctcctctcaccaccacgcagaccttcaccgtggacatctcc gacgtcaatgacaatgcccccgtcttcaaccagacctcctacaccatgtacgtgcgtgag aacaacgtccccacggtgtttgttggagccgtgagcgctgcagatgctgacgtggggctg aatgccaaggtgacctattccctggcagcagagcaagggccagagcggccctggtgctcc tgcatctcggtcaactctgagaatggacacgtgtttgtgctgcggcccctggactacgag cacttgaggcagaccgaggtgacggtcagtgcctctgacgcgggctctcctccgctcaga gccaacgtcaccgtccgccttgtggtgctggacgagaacgacaacgcaccgctcgtgctc tacccggcccaggagagcagcccggcctccagtgagctggtgcccgtgtcggctgaggcg ggctacctcatcagcaaagtggtggccgtcgatgccgactcgggacagaactcctggctc tcctaccacctgctcagggccaccgacccaggcctgttttccgtgggcctccagagcggc gaggtgcgtctcaggaggcccgtgacagagagagacagcgtcaagcagaagctccttgtg ctggtcagagacaacggcaagcccccgctgtcagccacggcagctctcagcgctctcctg ctcaaggacttcgccgccgtgcgcctcccgcacagcagcccggcctccgaggatcaggcc gcctccctgaccacctatttaatcattgccttggtctttgtctccctcctcttcctcatc tccaccgcagtgctggtggctcgcaaggtgtgcaggaggaaggagctgaaggctggccat gtgctctatgctgccgacaccttgcagagcggcccggccgatgcagccgctgcagggacc ctgccccgcgcctattgctacgagatcaacctcaccacgggctcaggcaacagcgagttc agattcctcaagcccatcctgcccagcctgcccccacagcactgcgccgtgggccagggc cctgaggaggaacaggatttctctggtgtccctgtcagcacagaggacatggccccagac aatgctggtgctctctctgcagggcagttcaatgctctttccttcagctag

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