Geospiza fortis (medium ground-finch): 102043744
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Entry
102043744 CDS
T03755
Symbol
GARS
Name
(RefSeq) glycyl-tRNA synthetase
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
102043744 (GARS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gfr01007
]
102043744 (GARS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gfr03016
]
102043744 (GARS)
03029 Mitochondrial biogenesis [BR:
gfr03029
]
102043744 (GARS)
Enzymes [BR:
gfr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
102043744 (GARS)
Amino acid related enzymes [BR:
gfr01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
102043744 (GARS)
Transfer RNA biogenesis [BR:
gfr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
102043744 (GARS)
Mitochondrial biogenesis [BR:
gfr03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
102043744 (GARS)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HGTP_anticodon
tRNA-synt_2b
WHEP-TRS
OS-D
EcoRII-C
Motif
Other DBs
NCBI-GeneID:
102043744
NCBI-ProteinID:
XP_005424409
LinkDB
All DBs
Position
Un
AA seq
686 aa
AA seq
DB search
MAVKHVETPHADGPSEHPSLQGELVRKLKEEKAPQVDIDRAVAELKARKRVLEAKELALQ
PKDDIVDRVKMEDTLKRRFFYDQAFSIYGGVSGLYDFGPVGCALKNNIIQAWRHHFIQEE
QILEIDCTMLTPEPVLKTSGHVDKFADFMVKDVKNGECFRADHLLKAHLQKLMSDKKCTA
EKKAEMENVLTQLDNYGQQELADLFVNYNVKSPVTGNDLSPPVSFNLMFKTSIGPGGNMP
GYLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEIEH
FVDPSEKNHPKFQNVADLNILLYSAKAQVSGQSAHVMRLGDAVQQGVINNSVLGYFIGRI
YLFLTKVGVSPEKLRFRQHMENEMAHYACDCWDAESKTSYGWIEIVGCADRSCYDLSCHA
RATKVPLIAEKHLKEPRTVNIVQFEANKGAIGKAYKKDAKVVMEYLSMCDECYISEMEQL
LNEKGEFTVETEGKTFLLTKDMVTVKRFQKTLHVEEIIPNVIEPSFGIGRIMYTVFEHTF
RIREGDEQRTYFSFPAVVAPFKCSVLPLSQNQEFMPFVKELSEALTRTGISHKVDDAAGS
IGRRYARTDEIGVAFGITIDFDTVNRTPHTATLRDRDSMRQIRAEISELPGIIRDLANGF
LTWADVEAKYPQFEGQETGKKDTIEE
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgaagcacgtggaaactccacatgcagatggaccctcagaacatccttccctg
cagggagagctggtgaggaagctgaaggaagagaaggctccccaggtggacatagacaga
gctgtagcagagctcaaagctcggaagagggtcctagaagcaaaggagctggccttacag
cccaaagatgacatcgtggacagagttaagatggaagacactctcaaaaggaggtttttc
tatgaccaagccttttctatttatggaggagtcagtggtctgtatgactttgggcctgtt
ggatgtgctttgaagaacaacatcatccaagcatggagacatcactttattcaggaagag
caaatcctggagattgactgcaccatgctcacccctgagccagttctaaagacttctggc
cacgtggacaagtttgctgacttcatggtgaaagatgtgaaaaatggggaatgttttcgt
gctgatcatctcttaaaagctcacctgcagaaactgatgtctgacaagaagtgcacggca
gagaaaaaggcagaaatggaaaatgttctaacacagttggacaattatggccagcaagag
cttgcagatctctttgtgaactacaatgtgaagtcccctgtcactggcaatgacctgtcc
cctcctgtttctttcaatctgatgttcaagacctccattgggcctggaggaaatatgcct
ggctatctgaggccagaaactgcacagggaatattcctcaacttcaaacgtctgctggag
tttaaccaaggcaaattgccttttgctgctgcccagattggaaattccttcaggaatgaa
atctcaccccgctccggccttatcagagtgagggaattcaccatggcagaaattgagcac
tttgtggaccccagtgagaagaaccaccccaagtttcagaacgtggcagatctcaacatc
ctcctgtactcggccaaggcgcaggtcagcgggcagtctgcgcacgtcatgcgcctggga
gacgctgtccagcagggtgtgatcaataactctgtcctgggttacttcatcggcagaatc
tacctcttcctcaccaaggtcggcgtatccccggagaagctgcgcttccgacagcacatg
gagaatgagatggctcattatgcctgtgactgctgggatgcagagtccaaaacctcctat
ggttggattgagatcgttggctgtgctgatcgttcctgctatgacctttcctgccatgcc
cgtgccaccaaagttcctctcatagctgagaagcatctcaaagaacctagaacagtcaac
attgttcagtttgaggcaaataagggagccattggcaaagcttacaagaaggatgccaag
gtggtgatggaatacctttccatgtgtgatgagtgctacatcagcgagatggagcagctg
ctcaacgagaaaggggaattcactgttgaaactgaagggaaaacttttctattaacaaag
gacatggttactgtgaagagatttcagaaaacattacatgtggaagaaatcatcccaaat
gtcattgagccctcgtttggcattggaaggatcatgtacacagtgttcgagcacacattc
cgcatccgggaaggagacgagcagagaacgtacttcagcttcccagctgttgtagcgccg
ttcaagtgctccgttcttcctctgagccagaatcaggaattcatgccttttgtcaaggaa
ttatccgaagcactgaccaggactgggatctcccacaaggtggatgatgcagcggggtcc
atcggccggcgctacgcccgcacggacgagatcggcgtggccttcggcatcaccatcgac
ttcgacaccgtgaaccgcaccccgcacacggccacgctgcgcgaccgcgactccatgcgc
cagatccgcgccgagatctctgaacttcctggcatcatccgagacctggccaacggtttt
ctcacctgggctgatgttgaggcaaagtatccacaatttgagggacaagagactggcaaa
aaggacacaatagaggaataa
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