Geospiza fortis (medium ground-finch): 102043772
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Entry
102043772 CDS
T03755
Symbol
ALS2
Name
(RefSeq) ALS2, alsin Rho guanine nucleotide exchange factor
KO
K04575
amyotrophic lateral sclerosis 2 protein
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gfr03036
]
102043772 (ALS2)
Chromosome and associated proteins [BR:
gfr03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
102043772 (ALS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RCC1
RCC1_2
VPS9
MORN
RhoGEF
PH
DUF7341
SOS1_NGEF_PH
RHG20_PH
Motif
Other DBs
NCBI-GeneID:
102043772
NCBI-ProteinID:
XP_005415987
UniProt:
A0A6I9HCA3
LinkDB
All DBs
Position
Un
AA seq
1653 aa
AA seq
DB search
MDSQERSSEEAEGAKERGLVYVWKAGSCSVTPERLPGLSGKTVLQAALGIHHGLLLTEGG
EVYSFGKLPWRSGPEECVNSPVLESTLLGHRIITVAAGSFHNGAVTESGVVYMWGDNSAG
QCAAANQPCVPHPQLVSICDSETSPLLSVRILQLACGEEHTLALSLSREIWAWGSGCQLG
LITTTFPVTKPQKVEHLAGRVVLQIACGAYHSLALVQCLPVQEMKPIPERCNHCSQPLIT
MTDKEDHVIISDSHCCPLGVALSDNQPENHVFCPSLDTPGGKGVTAGQSENCQKPLVEQH
RLVDLESDGPSGLSSSDGREDSGISSSGNTVFSDKKEXXXXXKEYLIGLSDNSLNESLNK
NIYTEPEQPSQEEQLSACIPGPPGSSTSTLNSLVASCASAVGVRVAATYEAGALSLKKVM
NFYGTSSSEPGSQSGSRSPGPEALKDSREEQVRLESMQGKKSSSLVDIREEESEGGSRRL
SLPGLLSQVSPRLLRKVGRAKMRTVALTPTYSGEADALLPSLRTEVWSWGKGKEGQLGHG
DVLPRLQPLCVKSLDGKEVIHLSAGGHHSLALTAKSQVYSWGSNISGQLGHLNSPTTVPR
LAKVCGDGIWTTAAGLDYSLFLADEKDFQPGLYYCGQETSTENNLNENSCTKSPVLLVAC
SKIGYISNVIAGGDNCLALVDKNVMGYIASLHELAATERRFYFRLSEIKSQVLRPLLGLD
NLGNANAIQLLQEMASRFSKLCYLIGQHGASLSSFLHGVKEARSLAILKHSSLFLDSYTE
YCTSVANFLVMGGFMLLAKPAMDFLSKNLELLLKLSEKNEESLQLVEVLNALFFMPFGRL
HNYARTLLKLATCFEVASPEYQKLQDSSSCYENLAVHLSRKMKEAEYTLGFWKTFPGKMT
DSLRKPERRLICESSNRALSLQHAGRFSVNWFILFNDALVHAQFSTHHIFPLSTLWVEAL
SEEAGNVNGLKITTPEEQFVLVSSTPQEKTKWLRAISQAVDQALRGTSDMILYGAGGNVP
RQEPPISRSAKYTFYKDPRFKDAVYDGRWLSGKPHGRGILKWADGRMYSGTFRTGLEDGY
GEYRVPNKALNKEDHYVGYWKEGKMCGHGVYSYATGEVYEGCFQDNMRHGHGLLRSGKLT
SSSPSMFIGQWIMDKKSGYGVFDDITRGEKYMGMWQDDVCQGNGVVVTQFGLYYEGAFSS
NKMMGTGILLSEDDTVYEGEFSDNWTLSGKGTLTLPNGDYIEGLFSGEWGSGIKITGTYF
KPSLYENEKDKPKALRKLGILAVSPDEKWKAVFEECWSQLGCESPGQGDRWKAWDNIAVA
LTTNRRQHKDSPELLSRSHTQTLESLEFIPQHIGAFTLEKYENIKKYLIKACDTPLHPLG
KLVETLVAVYRMTYVGVGANRRLLQEAVREIKSYLKRIFQLVRFLFPDLPEEGSTIPFLT
TEPKGRRSFCSGKSDSRSESPEPGYVVTSFGLLLPVLLPRLYPPLFMLYALDNEREEDIY
WECVLRLNKQTDLALLSFLGVQAKFWPGTVSILGESRKVSSNTKDACFASAVECLQQIST
TFTPADKLKVIQQTFEEISQSVLESLQEDFLWSMDDLFPVFLYVVLRARIRNLGSEVHLI
EDLMDPYLQHGEQGIMFTTLKACYYQIQHEKLT
NT seq
4962 nt
NT seq
+upstream
nt +downstream
nt
atggactcacaggaaagaagctcagaagaggcagaaggagccaaagagagaggcctggtc
tatgtttggaaggctggttcgtgctccgtgactccagaaaggcttccaggcctcagtgga
aagacagtgttacaggcagcccttggaatccatcatgggttacttctaacagaaggtgga
gaggtctacagttttggaaagctgccctggagatcaggacctgaggaatgtgttaacagt
cctgtcttagagagtactttgcttggccatcgtatcattacagtggcagccggcagcttc
cacaatggagcggtgacggagagcggcgtggtgtacatgtggggggacaactctgctggc
cagtgtgcagctgccaatcagccctgtgtgccccatccccagctggtcagtatctgtgac
tcggaaaccagccctctgctgtctgtgcggattttgcagctggcatgtggagaggagcac
acgctggcgctgtcgctgagcagagagatatgggcctgggggagtggctgccagctcggc
ctcataacaacaactttcccagtgacaaagccacagaaggtggagcacctggcaggacgt
gtggtgctccagattgcttgtggagcctaccacagcctggctctggtacaatgcctccct
gtgcaggaaatgaagcctatcccagagagatgcaatcactgcagtcagcctctcattacc
atgacagacaaggaagatcatgtcatcatttcagatagtcactgctgcccactgggtgta
gcactgtctgacaaccagccagaaaaccacgttttctgtccctcattggacacccccgga
ggcaaaggtgtaaccgctggccaaagtgaaaactgtcagaaaccacttgtggaacaacac
aggcttgtggatttagaatctgatggaccaagtggcctttccagcagcgatggacgggaa
gatagtggaatttctagttcgggaaatactgtgttctcagacaaaaaagaannggnnnnn
nnnnngaaagagtacttaattggtttgtcagataactcattaaatgagagcctgaataaa
aacatctatacagagcctgaacagccatctcaagaggaacagctcagtgcttgtatccct
ggccctccaggcagcagcacatccaccttgaacagcctggtggcctcgtgtgcctcagca
gttggggtgagagtcgctgccacctacgaggctggagccttgtccctgaagaaagtcatg
aacttctatggcacatcctcaagtgagccggggtctcagtcgggcagcaggtccccgggg
cccgaagctctgaaggacagtcgagaagagcaagtcaggctggaatccatgcaggggaag
aagagttccagtttagtagatattagagaggaggaatctgaaggagggagtcgaaggctt
tccctgcctggcttgttgtcacaagtttccccaaggctcttacggaaggtaggacgggca
aaaatgaggactgtggctctgactccaacctacagtggtgaagctgatgctcttttgccc
tctctaagaacagaggtgtggagctgggggaagggcaaggaaggacagctagggcatggt
gatgttctgccaaggcttcagccactgtgtgtgaaaagccttgatggtaaggaagtgatt
cacctctctgctggtggccatcattccttagcactcactgccaaatcccaggtgtattcc
tggggcagtaatatctctggccagcttggtcacttgaactccccaacaaccgtccctcgt
cttgcaaaggtgtgtggtgatggtatttggactacagcagcaggactagattattctctc
ttcttagcagatgagaaagacttccagcctggattatattactgtggccaggagacatca
acagaaaataatttgaatgaaaatagctgtactaagagtccagttttgttagtggcttgt
agtaagatagggtacataagcaatgtgatagctggtggtgacaactgtctggccttagtt
gacaaaaacgtaatgggatatattgccagtttgcatgagttggctgctactgagagaagg
ttttatttcagactgagtgagatcaaatctcaggttcttagacctcttttaggtttagat
aatttgggcaatgcaaatgcaatccagttgttgcaggaaatggcaagcaggttcagcaag
ctgtgctatctcattggtcaacatggagcttctttaagtagctttcttcatggagtaaaa
gaagccaggagcttggccatcctgaagcattccagtctctttttggatagttacactgag
tattgtacttcagtagcaaacttccttgtaatgggaggatttatgctccttgcaaagcca
gcaatggacttcttgagtaaaaacctggagctgttactgaaactgtctgagaagaatgag
gaaagcctccagctagtagaagttttgaatgctctgtttttcatgccatttggacgactt
cataattatgccagaactttgctaaagcttgccacgtgttttgaagtggcatctccagaa
taccagaagctgcaggattctagttcatgttacgagaatcttgctgttcatcttagcaga
aaaatgaaagaagcagaatacacccttggcttctggaagacctttcctgggaaaatgacg
gactccttgcggaagcctgagcggcgtttgatctgcgagagcagcaatcgggccctgtcc
ctgcagcacgcgggaaggttctctgtgaactggttcatcctcttcaacgatgctctggta
catgctcagttctcaacacatcatatctttcccttgtccacactgtgggtagaagctctt
tcagaagaagctggtaatgtgaacgggctgaagattacaacacctgaagagcaatttgtt
cttgtttcttcaacaccacaggagaagaccaagtggctgagggcaataagccaagcagtg
gatcaggcccttagagggacttctgacatgattctgtatggagctggtgggaacgtgcca
agacaggaacctcctatttctcgcagtgccaaatacaccttctacaaggaccctcgattc
aaggatgctgtttatgatgggaggtggctttcaggaaaaccccatgggagagggatccta
aaatgggcagatggacgaatgtactctgggaccttccggactgggctggaggatgggtat
ggggaatacagagtgcctaacaaagcactgaataaagaggaccattatgtgggatactgg
aaggaaggcaaaatgtgtgggcatggagtgtacagctatgccacgggtgaggtgtatgaa
gggtgtttccaggataacatgcggcacgggcacgggctgctgcgcagtgggaagctgacc
tcttcttctcccagtatgttcattggacagtggataatggacaagaagagtggttatgga
gtttttgatgatatcacaagaggagaaaagtatatgggcatgtggcaagatgatgtttgc
caaggcaatggtgttgtggttactcagtttggactgtattacgaaggagccttcagcagc
aacaaaatgatggggactggaattctgctttctgaggatgatactgtctatgagggggaa
ttttcagataactggactctgagtggaaagggaacactgaccttgccaaatggagattat
attgaaggtctcttcagtggagagtggggatctggaataaaaatcacaggaacctacttc
aaacctagtttgtatgagaatgaaaaggacaagcctaaagcactgcggaagcttgggatc
ctggcagtgtcccctgatgagaaatggaaggcagtatttgaagaatgctggagccagctt
ggctgtgagagccctggccagggggacagatggaaggcttgggacaacattgcggtggct
ctgaccaccaaccgacggcagcataaagacagcccggaattactgagccgctcacatact
cagacactggaaagtttggagttcattccacaacacattggtgccttcaccctggaaaaa
tatgaaaatataaaaaaatatttgataaaggcttgtgatactcctctgcatcccttgggc
aagctggtggaaacactggtggctgtctacaggatgacctatgttggagtaggagcaaat
cgacgactgctgcaggaggctgtaagggagatcaagtcctacctcaagcgcatcttccag
ctggtcaggttcttgtttcctgatctcccggaagagggcagcacaattccatttctgaca
acggagccaaaaggaaggcgatcgttttgcagtgggaaatctgattccagatcagaatct
cctgagccaggctatgtggtaaccagttttggcttgctgctccctgttttactgccacgc
ctctatccccctctgtttatgctctatgccttggacaacgagcgtgaggaggacatttac
tgggaatgcgttttgcgcctaaacaaacaaactgatctggctcttctcagcttccttgga
gtgcaagcgaagttttggccaggaactgtgtctatccttggagagagtagaaaggtatca
tcaaacacaaaagatgcctgctttgcctctgctgttgaatgtttacagcaaatcagtacc
acatttaccccagctgacaagctgaaggtgatccagcagacttttgaagagatctcccag
agtgtacttgagagccttcaggaagattttctgtggtccatggatgacttatttcctgtt
tttctctatgtggtgctacgagccaggataaggaatctggggtctgaggtgcacttaatc
gaagacctgatggatccctatctccagcatggggagcaaggcatcatgttcactaccttg
aaggcatgttactaccagattcaacacgaaaagcttacctag
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integrated database retrieval system
