Geospiza fortis (medium ground-finch): 102043936
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Entry
102043936 CDS
T03755
Symbol
SCFD1
Name
(RefSeq) sec1 family domain containing 1
KO
K19998
sec1 family domain-containing protein 1
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gfr04131
]
102043936 (SCFD1)
Membrane trafficking [BR:
gfr04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
102043936 (SCFD1)
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
102043936 (SCFD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec1
cwf21
Motif
Other DBs
NCBI-GeneID:
102043936
NCBI-ProteinID:
XP_005417682
UniProt:
A0A6I9HCX5
LinkDB
All DBs
Position
Un
AA seq
598 aa
AA seq
DB search
MLNFNVPPVKNSTGEPVWKVLIYDRFGQDIISPLLSVKELRDMGITLHLLLHSDRDAIPD
VPAVYFVMPTEENIDRMCQDLRNQLYESYYLNFISAISRSKLEDIANAAIGANAVTQVAK
VFDQYLNFITLEDDMFVLCNQNKELVSYRAINRPDITDTEMETIMDTIVDSLFCFFVTLG
AIPIIRCSRGTAAEMVAVKLDKKLRENLRDARNSLFTGDTLGAGQFSFQRPLLVLVDRNI
DLATPLHHTWTYQALVHDVLAGARPKKKNKKSYDLTTSDKFWQKHKGSPFPEVAESVQQE
LESYRAQEDEVKRLKSIMGIEGEDEGAISMLSDNTAKLTSAVSSLPELLEKKRLIDLHTN
VATAVLEHIKSRKLDVYFEYEEKIMSKSTLDKSLLDMISDPDAGTPEDKMRLFLIYYISS
AQAPSEIDLEQYKKALMDAGCNLAPLSYIKQWKAFTKMASAPTSYGNATPKPLGLFSRVM
NTGSQFVMEGVKNLVLKQQNLPVTRILDNLMEMKSNPETDDYRYFDPKMLRGSDSSVPRN
KNPFQEAIVFVVGGGNYIEYQNLIDYIKGKQGKHVLYGCSELFNATQFIKQLSQLGQK
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgctgaacttcaatgttcctccagttaaaaacagcacaggagaaccagtatggaaggtt
ctcatttatgacagatttggccaagatatcatctcacctttgctgtcagtgaaagaactg
agggatatggggatcactttgcatctgcttttacattcagatcgggatgctattccagat
gtcccagctgtttactttgtaatgccaacagaagaaaatattgacagaatgtgccaggat
cttcggaaccagctttatgagtcttactatttaaacttcatttctgccatttcaagaagt
aaactggaagatattgcaaatgctgctataggtgctaatgctgtaactcaagtggctaag
gtgtttgatcaatatcttaattttattactttagaagatgatatgtttgtattgtgtaac
caaaacaaagaacttgtttcataccgtgccattaaccgaccagatataacagacacagaa
atggaaactataatggacactattgttgatagtctcttctgtttttttgttacacttggc
gctatacctataatcagatgctcaagaggaactgcagctgaaatggtggcagtgaaactg
gataagaagctcagagagaatctaagagatgccagaaacagtctttttacaggtgataca
cttggagctggtcaattcagcttccaaaggcccttattagtccttgttgacagaaacata
gatttagcaactcctctacatcatacttggacataccaagctttagtgcatgatgttctg
gcaggtgcaagacctaagaaaaaaaataagaagtcctatgatttaactacatctgataaa
ttctggcaaaagcataagggcagtccttttccagaggtggctgagtctgttcagcaagaa
ctggaatcttacagagcccaggaagatgaagtcaaaagacttaaaagtatcatgggcatt
gaaggggaggatgaaggagcaataagtatgctttcagataatacagctaagctaacttca
gctgtcagctctcttccagaacttctggaaaagaagaggctcattgatcttcatacaaat
gttgcaacagccgttttggagcacataaagagtcgaaagctggatgtgtattttgaatat
gaggaaaaaataatgagcaaatccactctggataaatctcttctggacatgatttctgac
ccagatgcaggaactcctgaagataaaatgcgattatttctcatctattacataagctca
gctcaggcaccttcagagattgacttggagcagtataaaaaagcattgatggatgcaggt
tgtaatcttgctcctttgagctacataaaacagtggaaagctttcactaagatggcttca
gctccaaccagctatggaaacgctacacctaaacctttgggtctattttcacgtgttatg
aatacaggatcacagtttgtaatggagggagtgaagaacttggtactgaagcaacaaaat
ctgccagtcacacgtattttggacaaccttatggagatgaagtcaaaccctgagacagat
gactaccggtattttgaccccaagatgctgcgaggcagtgacagctcagttccaagaaat
aaaaatccattccaggaggcaatagtgtttgtagttggaggaggcaactatattgaatat
caaaatctcattgactacataaagggtaaacaaggcaaacatgtcctgtatggctgcagt
gaactttttaatgccacacagtttataaaacagctgtcccaacttggccagaaataa
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