Geospiza fortis (medium ground-finch): 102043961 Help Entry 102043961         CDS       T03755                                  Symbol SF3B3 Name (RefSeq) splicing factor 3b subunit 3   KO K12830   splicing factor 3B subunit 3 Organism gfr  Geospiza fortis (medium ground-finch) Pathway gfr03040   Spliceosome Brite KEGG Orthology (KO) [BR:gfr00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     102043961 (SF3B3)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:gfr03021]     102043961 (SF3B3)    03041 Spliceosome [BR:gfr03041]     102043961 (SF3B3)    03036 Chromosome and associated proteins [BR:gfr03036]     102043961 (SF3B3) Transcription machinery [BR:gfr03021]  Eukaryotic type   RNA polymerase II system    Coactivators     SAGA/TFTC/STAGA complex      102043961 (SF3B3) Spliceosome [BR:gfr03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     102043961 (SF3B3)  Complex B     102043961 (SF3B3)  Complex C    U2 SnRNP specific factors     102043961 (SF3B3) Chromosome and associated proteins [BR:gfr03036]  Eukaryotic type   Histone modification proteins    HAT complexes     STAGA complex      102043961 (SF3B3)     TFTC complex      102043961 (SF3B3) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  MMS1_N CPSF_A Motif Other DBs NCBI-GeneID:  102043961 NCBI-ProteinID:  XP_005422799 UniProt:  A0A6I9HKN7 LinkDB All DBs Position Un AA seq 1217 aa AA seqDB search MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNVFEKIHQETFGKSGCRRIVPGQY LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILCCQIADLANEDT PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVN ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSI GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA AFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTG DEWYVLVGVAKDLILNPRSVAGGFVYTYKLVNSGEKLEFLHKTPVEEVPAAIAPFQGRVL IGVGKLLRVYDLGKKKLLRKCENKHIANYICGIQTIGHRVIVSDVQESFIWVRYKRNENQ LIIFADDTYPRWVTTATLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRG LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF FQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVAEELDRT PPEVSKKLEDIRTRYAF NT seq 3654 nt NT seq  +upstreamnt  +downstreamnt atgtttctgtacaacctaacgctgcagcgtgccacaggcattagctttgccatccatggc aatttctcaggaaccaaacaacaagaaattgttgtttcccggggtaagatcctggagtta ctgcgccctgaccccaacacagggaaggttcacacgctgctgaccgtggaggtgtttggg gtcatccgctccctcatggccttcaggctgacagggggcaccaaggactacatcgtggtg ggcagcgactcggggcgcatcgtcatcctggagtaccagccctccaagaacgtctttgag aagatccaccaggaaacctttggcaagagtggctgtcgcaggatcgttccaggccagtac ttggctgtggacccaaagggccgtgctgtcatgattagtgccattgaaaagcagaagctg gtgtatatcctgaacagagatgctgctgctcgactcaccatctcctccccactggaagcc cacaaggccaataccttggtctaccacgtggtgggagttgatgtggggtttgaaaaccca atgtttgcttgtctggaaatggattatgaggaagcggacaatgatccaacaggtgaagct gcagccaacacacagcagacattgacattttatgaattggacttgggtttgaaccatgtt gtcaggaaatacagtgagcccctggaagagcatggcaacttcctcataacagttcctggt ggttctgatggccccagcggggtgctgatctgttctgaaaattatattacttacaaaaac ttcggtgaccagcctgatatcagatgcccaattcccaggagacggaatgacttggatgac ccagagaggggtatgatctttgtctgctctgctacacataagaccaagtccatgttcttc ttcctggcccagacagagcagggagacatcttcaaaattactttggagactgatgaagac atggtaacagagattcgactgaagtactttgacactgttcctgttgctgctgccatgtgt gtgctgaaaacaggatttctctttgtggcatctgaatttggaaatcattacttgtaccag atagctcacctgggagatgatgatgaggagccagaattttcctctgccatgcctcttgag gaaggagacacattctttttccagcctcgacctctgaagaacctggtgctggtggatgag ttggacagtttgtctcctattctgtgttgtcagatagcagatttggccaatgaagacaca ccccagttgtatgtggcttgtggtcgggggcccaggtcatccctgagggttttaagacat ggacttgaggtatctgaaatggctgtctcagagctgcctggtaaccccaatgctgtatgg actgtgaggagacatgttgaagatgaatttgatgcctacattatcgtgtccttcgtaaat gccacactggtgctgtctatcggagagactgtagaggaagtgactgactctggattcctg ggcactacaccaaccttgtcctgctctcttcttggtgatgatgctttggtacaggtttat ccagatgggatccggcacatccgagcagataagagagtaaatgaatggaagacaccaggg aagaaaaccattgtaaaatgtgctgtgaaccaaagacaagtagtgatagcactgactgga ggagaactggtttactttgagatggacccgtcaggacagctgaatgagtacacagagaga aaggagatgtcggctgacgtcgtttgcatgagcctggccaacgttcctcctggggagcag cgttcccggttccttgctgttggactggtggacaacactgtcagaattatttcacttgac ccttcggattgtttacagcccctgagtatgcaggcactgcctgcacagcccgagtcgctg tgcatcgtggagatgggtggcacggagaagcaggatgagctgggggagagaggctccatt ggctttctgtacctgaacattggactgcagaacggtgtgctgctgcggaccgtcctggac cccgtcaccggtgacctgtccgacaccaggacccggtacctcggctcccggcccgtcaaa ctcttccgtgtccggatgcaaggccaggaggcggtgctggccatgtcaagccgttcctgg cttagttattcctatcaatcacgcttccacctgactcccctgtcttatgagacactggag tttgcatctggttttgcttctgagcagtgccctgagggcattgtggccatctccacaaac acattgaggattttggcactggagaagctgggagcagtcttcaaccaggttgccttccca ttgcagtacacaccccgaaaatttgtcattcacccagagagcaacaacctgatcatcatc gagacagaccacaacgcttacactgaggccaccaaggctcagaggaagcagcaaatggct gaggaaatggtggaagctgcaggtgaggacgagagggagctggctgcagagatggctgca gcctttctgaatgagaatcttcctgagtccatcttcggtgctcccaaggcagggaatggt cagtgggcctctgttatcagagtgatgaaccccatccaaggaaatacattagatctggtt cagctggagcagaatgaagctgctttcagcgtggccgtgtgccgcttctccaacaccggt gatgagtggtacgtgctggtgggagtcgccaaggacctcattctgaacccacgctcagtt gctggggggtttgtctacacatacaagctggtgaatagtggtgagaagctggagtttctg cacaagacccctgtggaggaggtccctgcagccattgctccattccaaggccgagtgtta attggagttgggaagctcctgcgtgtatatgacctgggcaagaagaaactgcttcggaag tgtgagaataagcacattgccaactacatctgtgggatccaaaccattgggcacagagtg attgtttcagatgttcaggagagtttcatctgggtgcgttacaaaaggaatgagaaccag ctcattatctttgctgatgacacttacccccggtgggtcactacagcaacactcctggat tacgacactgtggctggggcagacaagtttggtaacatctgtgtggtgagattgcctccc aacaccaatgatgaggtagatgaggatcccacaggcaacaaagctctctgggacaggggc ctgcttaatggagcatcgcagaaggctgaagtgattatgaattatcacgtgggagaaacg gtgctttccttgcagaagaccacactgattccaggaggctctgaatctcttgtttataca accttatcagggggaataggaatcttggtcccttttacttcccatgaggatcacgacttc ttccagcatgtggaaatgcacttacggtctgagcaccctcctctctgtggacgggaccat ctcagtttccgctcctactacttcccagtgaagaacgtgattgatggggacctgtgtgag cagttcaactccatggagcctaacaaacagaagaatgtggccgaggagctggaccggacc ccacccgaggtgtccaagaagctggaggacatccgcacgcgctacgcgttctga

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