Geospiza fortis (medium ground-finch): 102044020
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Entry
102044020 CDS
T03755
Symbol
CRNKL1
Name
(RefSeq) crooked neck pre-mRNA splicing factor 1
KO
K12869
crooked neck
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102044020 (CRNKL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gfr03041
]
102044020 (CRNKL1)
03036 Chromosome and associated proteins [BR:
gfr03036
]
102044020 (CRNKL1)
Spliceosome [BR:
gfr03041
]
Complex B
Other components
Prp19-related factors
102044020 (CRNKL1)
Complex C
102044020 (CRNKL1)
Chromosome and associated proteins [BR:
gfr03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
102044020 (CRNKL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT
TPR_14
TPR_19
Suf
TPR_17
U3_assoc_6
Mad3_BUB1_I
Motif
Other DBs
NCBI-GeneID:
102044020
NCBI-ProteinID:
XP_014163162
UniProt:
A0A6I9Z940
LinkDB
All DBs
Position
Un
AA seq
613 aa
AA seq
DB search
MASTAAGKQRIPKVAKVKNKAPAEVQITAEQLLREAKERELELLPPPPQQKITDVEELND
YKLRKRKTFEDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERALDVDYRNVTLWLKY
AEMEMKNRQVNHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGSRQVFERWMEWQPE
EQAWHSYINFELRYKEVDRARSIYERFVLVHPEVKNWIKYARFEEKHSYFAHARKVYERA
VEFFGEEHMDEHLYVAFAKFEENQKEFERVRVIYKYALDRIPKQDAQNLFKNYTIFEKKF
GDRRGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDTDAETVREVYERAIANVP
PIQEKRHWKRYIYLWINYALYEELEAKDAERTRQVYQACLELLPHKKFTFAKMWLLYAQF
EIRQKNLPLARRALGTSIGKCPKNKLFKGYIELELQLREFDRCRKLYEKFLEFAPENCTS
WIKFAELETILGDIDRARAIYELAIGQPRLDMPEVLWKSYIDFEIEQEEYEKTRNLYRRL
LQRTQHVKVWISLAQFELSDAGWEEYYDYIFPEDTANQPNLKLLAMAKLWKKQQQESEAA
AMDPDKDIDESQT
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccacggcggcggggaagcagcgcatccccaaagtggccaaggtgaaaaacaaa
gcacccgccgaagttcagatcacagcggagcagcttctgcgagaggcaaaggagagggaa
ctcgagcttctcccaccgcctccgcagcagaagatcacagatgttgaagagctaaatgac
tataaactccggaagaggaagacttttgaagataacattagaaagaacaggactgttatc
agtaactggataaagtacgcacaatgggaggaaagcctgaaggaaatccagagagcccgt
tccatttacgagcgtgccctggacgtggactacaggaacgtcaccctctggctgaaatat
gccgagatggagatgaagaaccgccaggtcaaccacgccaggaacatctgggaccgggcc
atcaccaccctgcccagggtgaaccagttctggtacaagtacacgtacatggaggagatg
ctggggaacgtcgctggctcacgccaggtgtttgagcggtggatggagtggcagccagag
gagcaagcctggcattcctacatcaacttcgagctcagatacaaggaggtggacagagca
cgaagcatttacgagagatttgtcctggttcaccccgaggtgaagaactggatcaagtac
gcgcgcttcgaggagaagcacagctactttgcccacgccaggaaggtgtacgagagggca
gtggagttcttcggggaggagcacatggatgagcacttgtacgtggcctttgccaagttt
gaggagaaccagaaagagtttgaaagagtgagagtcatctacaagtatgccttggataga
attccaaagcaggatgcccagaatctcttcaagaattacaccatctttgagaagaagttt
ggagacaggaggggaattgaagacatcattgtcagcaagaggagattccagtatgaggag
gaagtgaaggcaaacccccacaactacgacgcgtggttcgattacctgcggctggtggag
agcgacacggacgccgagaccgtgcgggaggtgtacgagagagccattgccaacgtgccc
cccatccaggagaaacgccactggaagaggtacatctacctctggattaactatgctctc
tatgaggagctggaggcaaaggatgcagagagaaccagacaggtgtaccaggcatgcctt
gagctcctgcctcacaagaagtttacatttgctaaaatgtggctgctgtatgcacagttt
gaaattcgacagaagaacctcccccttgccagaagggctttggggacatccataggtaaa
tgcccgaaaaacaaactgttcaaaggctacattgagctggagttacagctgcgcgaattt
gaccgctgccgaaagttgtatgaaaaattcctggagtttgcaccggagaactgcacgtcc
tggattaaatttgctgagctggagaccatccttggggacattgaccgtgccagggccatc
tatgagctggctattggccagccccggctggacatgcccgaggtgctgtggaaatcctac
attgactttgagattgagcaagaggagtatgagaagaccaggaacctttaccggcggctg
ctgcagcgcacacagcacgtcaaggtgtggatcagcctggcgcagtttgagctgtctgat
gctggatgggaggagtactatgattacattttcccagaagacactgccaatcagcccaac
ctcaaactcctggctatggcaaagctctggaagaaacagcagcaggagagcgaagctgca
gccatggatcctgacaaggacattgatgaaagccagacttag
DBGET
integrated database retrieval system
