Geospiza fortis (medium ground-finch): 102044070 Help Entry 102044070         CDS       T03755                                  Symbol LAMC1 Name (RefSeq) laminin subunit gamma 1   KO K05635   laminin, gamma 1 Organism gfr  Geospiza fortis (medium ground-finch) Pathway gfr04510   Focal adhesion gfr04512   ECM-receptor interaction Brite KEGG Orthology (KO) [BR:gfr00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     102044070 (LAMC1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     102044070 (LAMC1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  EGF_laminin Laminin_N EGF_LMN_ATRN Laminin_B Laminin_I Motif Other DBs NCBI-GeneID:  102044070 NCBI-ProteinID:  XP_005423818 LinkDB All DBs Position Un AA seq 1614 aa AA seqDB search MCHPSLNNSEAAVALCGSVLLCVPSAAAGAARAAMDECAEERSGRAQRCMPEFVNAAFNA TVLATHTCGTPAEEYCVQTGVTGVTQSCHLCDAAQPHLSHGAAFLTDYNSPADATWWQSR TMLAGVQHPTAVNLTLHLGKAFDITYVRLKFHTSRPESFAIYKRTREDGPWVPYQYYSGS CESTYRKVNRGFIRTGEDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQ EWVTATDIRVTLNRLNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECVKNELG KLVCNCKHNTFGVDCEKCLPFFNDRPWRRATAESANECLPCDCSGRSQECYFDPELYRAT GHGGHCTNCAGNTDGPRCERCRDGFYRLASEQGCLPCSCNPVGSLSTQCDSYGQCSCKPG VMGDKCDRCQPGFHSLSEAGCRPCSCNAAGSTGECNVETGRCACKDNVEGFHCERCKPGF FHLESSNPRGCTPCFCFGHSSVCTSAVGYSIYSITSNFEFGEDEWRAEQRDGSEVLLQWS AETQDISVISDTYFPMYFVAPRKFLGNQVLSYGQNLTFSFRVDRRDTRLSAEDLVLEGAG LRVSVPLIAQGNSYPSENVQTYTFRLHEAADYPWRPALTAFEFQKLLHNLTSIKIRGTYS ERSAGHLDDVTITSARPGPGVPVAWVESCSCPVGYEGQFCERCTSGYRRESPGLGPYSPC VPCTCNGHSETCDPETGMCNCRDNTAGTHCEKCSDGYYGDATAGTASDCQPCPCPGTSSC AIVPRTKEVVCTSCQAGTTGKRCELCDDAYFGDPLGRNGAVRPCRLCQCNNNIDPNAVGN CDRQTGECLKCIYNTAGFYCDRCKDGFFGNPLASDPSDKCRACHCNPYGTVNQQTICNQV TGQCECLSHVTGRDCSACEPGFFNLQSGRGCERCNCHALGSTSGQCDIRTGQCECQPGVT GQHCDRCEPNHFGFGSEGCKPCDCDPEGSRSLQCRENGHCECKEGFVGSRCNQCEENYFY NRSWPGCQECPACYRLVKDKVAEQRQRLQELENLIANLGSREETVTDEAFXXXXXXXXPX STEEQRWVDLIRHGPSVSDVDQGLMDRLKDINSTLVSQLNRLRNIQGTVQDTESLAEQAR VRVEDTEDLISMASDMLERAKMAADNVSITPPEQSGDPNNMTHLAEEARKLAERHKKEAD EIVRIAKAANDTSTEAYQLLLKTLAGENQTAIDIDELNQKYNQARNISRDLEKQATKVLA EAEETGNRALQIYANLTSLPTVDSTGLENKANKIKKEAEELDQLIARKLKDYEDLREDMK GKELEVKNLLEKGKTEQQTADQLLARADAAKALAEEAARESSGTLQEANTILRNLKDFDK RVNDNKTAAEEALKKIPTITQTIAEANNKTQQAELALGNAAADAREAKARADDAEKIASS VQKSAAATRAEADKTFADVTGLAREVDDMMKQLQDAEKELKRKQADAEQDMRMANEASQA AQEAEDNARKAKNSVNSLLTVINDLLDQLGQLETVDLNKLNEIEGALNSAKDQMKDSDLD QKVSFLEREAKKQDDAIQAYNRDIEEILKDISNLEDIRKTLPSGCFNTPSIEKP NT seq 4845 nt NT seq  +upstreamnt  +downstreamnt atgtgtcatcccagcctgaacaatagcgaggcagcggtggctctgtgcggctctgtgctg ctctgtgtcccttctgcagctgctggggctgccagggctgccatggacgagtgcgcggag gagcggagcgggcgggcgcagcgctgcatgcccgagttcgtgaacgcggcgttcaacgcc acggtgctggccacgcacacgtgcgggacgccggccgaggagtactgcgtgcagaccggg gtcaccggcgtcacccagtcctgccacctctgcgacgccgcccagccgcacctgagccat ggcgccgccttcctcaccgactacaacagcccggccgacgcgacctggtggcagagccgc accatgctggccggcgtgcagcaccccaccgccgtcaacctcaccctgcacctcggaaaa gcctttgacatcacgtacgtgcgcctcaagttccacaccagccggcccgagagctttgcc atctacaagcgcacgagggaggacggcccctgggtgccctaccagtactacagcggctcc tgcgagagcacctaccgcaaagtcaaccgcggcttcatccgcaccggcgaggacgagcag caggcgctctgcaccgacgagttcagcgacatctcccccctcaccgggggcaacgtggcc ttctccacgctggaggggcgtcccagtgcctacaactttgacaacagccctgtgctgcag gaatgggtgacagctacagatattagagtgaccctcaaccgtctgaacacgtttggagat gaagttttcaatgacccaaaagttctcaagtcttactactatgcaatttctgattttgct gtgggtggtaggtgcaagtgcaacgggcacgccagtgagtgtgtgaagaacgagcttggc aagctggtctgcaactgcaagcacaacacctttggggtggactgtgagaagtgccttcct ttcttcaacgaccgcccgtggaggagggcgactgccgagagcgccaacgagtgcctgccg tgtgactgcagcgggcgctcccaggagtgctactttgaccccgagctgtaccgcgccacg ggccacggcgggcactgcaccaactgcgccggcaacacggacgggccccgctgcgagcgc tgccgcgacggcttctaccgcctggccagcgagcagggctgcctgccctgcagctgcaac cccgtcggctccctcagcacacagtgtgacagctacggccagtgcagctgcaagcccggt gtgatgggggacaagtgtgaccgctgccagccagggttccactccctctctgaagctggc tgcaggccctgttcttgcaatgctgctggcagcacaggggagtgcaacgttgagacaggg cggtgtgcgtgcaaggacaatgtggaaggattccactgtgagagatgcaaacctggattt ttccatctggagtcctccaatccaagaggctgtaccccctgcttctgttttggacactca tcagtctgcaccagtgctgtgggctacagtatctatagcatcacctccaacttcgagttt ggagaggatgagtggcgtgctgagcagcgagatggctcagaggtcttgctgcagtggagt gctgagacccaggatatctccgttatctctgacacctacttccccatgtacttcgttgca ccacgcaagttcttgggcaaccaggttttgagttatgggcaaaacctgaccttctccttc cgtgtggacaggcgggacacgcgcctctctgcagaggacctggtgctggaaggggctggg ctgagagtgtctgtgcctctcattgcccagggcaactcctaccccagtgagaatgtgcag acctacaccttcaggctccacgaggctgcagattacccatggaggcctgctcttacagca tttgaattccaaaagcttctccacaacttgacttccatcaagatccgtgggacatacagt gagagaagtgccggtcacctggatgatgtcaccatcacaagtgctcgccctggacccggt gtgcccgtggcctgggtggagagctgctcgtgtccagtgggatacgaggggcagttctgt gagcgctgcacctctgggtaccgccgagagagcccaggcctggggccctacagcccctgc gtgccctgcacgtgcaacgggcacagcgagacctgcgaccccgagacgggcatgtgcaat tgcagggataacacggcagggactcactgtgagaagtgcagtgatgggtattacggcgat gccacggccggcacagcctcggactgccagccctgcccgtgcccaggcacctcgagctgt gccatcgtgccccgcaccaaggaggtggtgtgcaccagctgccaggctggcactacaggc aagaggtgtgagctgtgtgatgatgcctatttcggagaccccctgggcaggaatggcgcg gtgaggccgtgccgcctgtgccagtgcaacaacaacatcgaccccaacgccgtgggcaac tgcgaccgccagaccggcgagtgcctcaagtgcatctacaacactgctggcttctactgc gaccgctgcaaggatggcttctttgggaaccccctggcctctgacccctcagacaagtgc agagcttgtcactgcaatccctacggcacagtgaatcagcagacaatctgcaatcaagtg actgggcagtgtgagtgcttgtctcacgtcactgggagggactgcagtgcctgtgagcct ggattcttcaatctccagagtggacgtggctgtgagaggtgcaactgccacgcgctgggc tccaccagcgggcagtgtgacatccggacggggcagtgcgagtgccagccaggcgtcacc ggccagcactgtgacagatgtgagcccaaccacttcggctttggctctgaaggctgcaaa ccctgtgactgtgatcccgagggctcgcggtcgctgcagtgccgggagaacggtcactgt gagtgcaaggagggcttcgtggggagccgctgcaaccagtgcgaggagaactacttctac aaccgctcctggcctggctgccaggagtgtccagcctgttacagactggtgaaagacaag gtggcagagcaacgtcaaaggctgcaggagttggaaaatcttatagcaaatctgggtagc agagaagaaactgtaactgatgaagccttcnnnnnnnnnnnnnnnnnnnnnnnnccatga agcacagaagagcaaaggtgggttgacctgatcagacacggaccaagtgtttcagacgta gatcagggcctcatggatcgtctcaaagacatcaacagcaccttagtgagtcagctgaac aggctgaggaacatccagggcacagtgcaggacacggagagcctggcggagcaggcgcgg gtgcgggtggaggacactgaggacctgatcagcatggcctctgatatgctggagagggcc aagatggcagctgacaacgtgtccattacacctccagagcaaagtggggaccccaacaac atgactcacttggcagaagaggcccgtaagctggcagaaaggcacaaaaaggaagctgat gagattgttcgcatagccaaggctgcaaatgatacttccacagaagcatatcaactgctg ctgaaaaccctggctggagaaaaccaaactgcaattgatattgatgagctcaaccagaag tacaatcaagcaaggaatatttctcgagacctagagaaacaggccaccaaggtgcttgcg gaggcagaggaaactggaaacagagccctgcagatctatgctaatctcaccagcctgcct actgtggattccacagggctagagaataaagcaaataagatcaagaaggaagcagaggaa ctggatcaactaattgccaggaagctaaaggattatgaggacttgagagaagatatgaaa ggaaaggagcttgaagtaaagaacctcttggagaaagggaagacagagcagcagactgca gaccagctcttggctcgagcagatgcagcgaaagccctggctgaagaagctgctcgggag agcagtggcacactacaggaggccaataccattctcaggaacctgaaagactttgacaag cgggtgaacgataacaagacggcggctgaggaggcgctgaagaagatccctaccatcacc cagaccattgcagaggccaacaacaagactcagcaggcagagctggcactgggcaacgct gctgctgatgcccgtgaggccaaggccagagcagatgatgctgagaagattgccagctct gttcagaagagtgctgctgctaccagagccgaagccgacaagacctttgctgatgtgaca ggactggccagggaggtggatgacatgatgaagcagctgcaggatgcagagaaggagctg aagcggaagcaggctgatgctgagcaggatatgaggatggcaaatgaggcctcacaggct gcccaggaggcagaagacaatgcaagaaaagccaagaactctgtgaacagtctgctcact gtcattaatgacctgttggatcagctagggcaactggagacagtggacttgaacaaactg aatgaaattgaaggtgccttgaacagtgccaaagaccagatgaaagacagtgacctggac cagaaagtgtctttccttgagagagaagccaagaagcaagatgatgcgatacaggcctac aacagggacattgaagagatcctgaaggacattagcaacctggaagacatcaggaagacc ttgccatctggctgtttcaacaccccgtccattgagaagccctaa

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