KEGG   Geospiza fortis (medium ground-finch): 102044225
Entry
102044225         CDS       T03755                                 
Symbol
COL4A2
Name
(RefSeq) collagen type IV alpha 2 chain
  KO
K06237  collagen type IV alpha
Organism
gfr  Geospiza fortis (medium ground-finch)
Pathway
gfr04382  Cornified envelope formation
gfr04510  Focal adhesion
gfr04512  ECM-receptor interaction
gfr04518  Integrin signaling
gfr04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:gfr00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    102044225 (COL4A2)
   04518 Integrin signaling
    102044225 (COL4A2)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    102044225 (COL4A2)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    102044225 (COL4A2)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    102044225 (COL4A2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gfr04147]
    102044225 (COL4A2)
   00536 Glycosaminoglycan binding proteins [BR:gfr00536]
    102044225 (COL4A2)
Exosome [BR:gfr04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   102044225 (COL4A2)
Glycosaminoglycan binding proteins [BR:gfr00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   102044225 (COL4A2)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 102044225
NCBI-ProteinID: XP_005420074
LinkDB
Position
Un
AA seq 1761 aa
MGLVSIEVNAQLTMYKTLSKKMSVYGVFDLFMFLEHDEYIHPSTVAGSMGIIVFSKVLQE
SLTDLFLNINKLVNHTVLDCNPSNGGKKYTGPCGGRDCSGGCQCFPEKGSRGQPGLLGSQ
GFTGPPGLMGIPGVQGPKGHKGERGYPGITGPKGEVGQRGVTGFPGGHPGQPGPRGKPGH
DGCNGTAGDPGDAGTPGFSGFPGSIGVQGPKGQKGEPYIVAPEIISRHRGDPGDSGIIGF
PGPPGTLGIQGPIGPRGQRGRPGPPGPPGPPGPQGNRGLGFYGEKGEQGPPGPPGPPGLP
TRELTGVPPDKHKGERGDPGPRGEAGLPGVLLFPLEKGEEGVMGYPGQRGLPGITGFPGL
SGERGIPGYDGPPGGHGPRGSKGEPGEMGPPGPDSYFPSRIPRKGARGDPGFPGVSGLPG
DRGDEGDRGLPGLPGFSDADGDKPGLPGEMGPKGEKGEIGSPAYFAGPPGLPGKDGSPGI
RGPPGPVGAPGPLFGLKGREGAPGRFGMQGFPGPRGRKGPKGEEGDCTRCLLGEELRRGS
TGPRGPPGFPGTPGQPGRKGEPGDQGQHGLPGFPGEKGFSGPAGFPGQKGEKGDSLHVTT
KGTKGIRGDPGLPGIRGEDGFPGRDGLDGLPGQPGLPGDSLRGFPGDPGYPGELGPKGFP
GEAGLPGEGFPGPKGFRGPPGDQGQAGSPGSPGLPGLPGEPGQLDCGQVIEDFPRGDATE
PIWSGAGCVRPPKGSQGKPGVPGATGAKGARGFPGDPGPMGFPGLNGTRGDPGREGFPGP
PGFTGPRGDRGPNGLPGLQGHPGLTGKSGAPGAPGPKGLPGDVFGAAAGARGDVGLPGFP
GLKGAPGDQGVPGTRGADGSPGSPGPKGDPGPQGLPGLMGLPGTPGTRGFPGPPGNRGPD
GGPGSQGPLGPPGARGEDGEQGFPGPVGLKGLSGDKGDMGHTGLPGIRGMTGPPGISGMD
GFPGDKGLKGSPGIDGFKGMTGLKGRPGIKGIKGEFGPLGAQGDKGSQGAHGFKGDRGDQ
GPPGDPPKLMPSMMMEVKGEKGDVGERGTKGFFGLKGSKGMPGLPGKTGSPGSPGHPSYV
AGVKGDIGAKGLTGVKGYPGPAGSPGIRGFPGTTGVRGEKGIPGISGHFGTPGSHGEIGD
RGDTINLPGAVMPGLKGEVGVPGLTGIRGGVGPKGEGGDPGFPGIEGLKGTQGVPGSVGQ
EGLPGLVGPPGQQGSPGTPGLTGQKGAPGWPGLPGQAGQPGFRGISGLHGLPGTKGLPGS
PGPDGYGSAGFPGAAGDKGEAGEPSRVEGSRGPPGQKGERGVPGVPGSFGIPGQEGFPGP
PGISNISGYPGDKGSPGLDGVPGYPGPQGQPGTPAPPGSKGESGEAGRTGEIGPKGSRGD
PGLSGSPGLPGLPGPKGPRGEQGVIGFMGTVGFPGDLGPIGPKGDRGVTGFQGPPGSPGR
APDPPRLVAEQGSPGPRGSIGPQGSPGDMGPQGPPGDPGFRGSPGEPGLQGRGGIPASPG
SRGEQGGMGFQGPVGFEGQPGRPGSPGPPGMPGRSVSMGYLLVKHSQSDQEPMCPVGMNK
LWSGYSLLYFEGQEKAHNQDLGLAGSCLSRFSTMPFLYCNPGDICYYASRNDKSYWLSTT
APLPMMPVAEEDIKPYISRCSVCEAPAVAIAVHSQEASIPHCPEGWRSLWIGYSFLMHTA
AGDEGGGQSLVSPGSCLEDFRATPFIECNGARGTCHYFANKYSFWLTTIDQPFQSKPSGD
TLKAGLIRSHISRCQVCMKNL
NT seq 5286 nt   +upstreamnt  +downstreamnt
atggggcttgtcagcatagaggttaatgcacaacttacaatgtacaaaacgctatcaaag
aagatgtcggtgtatggagtctttgatttgttcatgttccttgaacatgatgaatatatt
catcccagcacagtggctgggtccatgggtataattgtttttagcaaagttctacaagaa
tccttaacagacttatttttgaacattaacaagcttgtaaaccatactgttttagactgt
aaccccagtaatggtggaaagaaatacacaggaccatgtggaggcagagactgcagtgga
ggatgtcagtgtttccctgaaaaaggaagccgtggccagccaggactccttggatcacag
ggattcactggaccaccaggattgatggggatcccaggagtgcaaggtcccaaaggtcac
aaaggtgaaagaggatacccaggaataactggacccaaaggagaagtgggacaaagagga
gtcactggattccccggaggtcatccaggccagccaggaccaaggggcaaaccaggtcat
gatggctgtaatgggacagcaggtgaccctggtgatgcgggaactcctggattctctggt
ttccctggtagcattggagtccaggggcccaagggccagaagggggagccgtacatagta
gcgccggagatcatcagccgacacaggggagatcctggggattcaggcatcattggtttt
ccaggacctccgggtacgctgggtattcaaggacctattggtccaagaggacagcgagga
cgaccaggaccaccaggacccccagggcccccaggaccacaaggcaacaggggacttggc
ttctatggagaaaaaggtgaacagggccctccaggtcctccaggtccacctgggcttcct
acaagagaattgacaggtgtcccccctgacaagcacaagggtgaaagaggagaccctgga
ccaagaggagaagctggacttccaggtgttcttctctttcctctcgaaaaaggtgaagaa
ggggtaatgggctacccaggacagaggggactacctggcatcactggttttccaggactc
agtggagaaaggggtattccaggatatgatggtccacccggtggccatggtcccagagga
agcaagggggagcctggcgagatgggtcctccagggccagattcctattttccttcccgc
atccccaggaaaggtgcaagaggtgatccaggcttcccaggtgtttctggactcccagga
gacagaggagacgagggagatcgtggattgcctggtcttcctggattttctgatgcggat
ggggataagccaggcttgcctggagaaatgggaccaaaaggtgaaaagggtgaaattgga
tctcctgcttattttgcgggaccgcctgggcttccaggcaaggatggctcacctggaatt
cgtggtccacctggtcctgttggagcccctggtcctctctttggattaaaaggacgagag
ggagcaccaggtagatttggtatgcaaggtttccctgggccaagaggacgaaaaggacct
aaaggtgaagaaggggattgcactagatgccttttgggtgaggaactcagaaggggctct
actggcccccgtggccctcctggctttccaggaacccctggccagcctggaaggaaagga
gaacctggtgatcaaggacaacatggtcttcctggcttccctggagaaaaaggattttcg
ggtccagctggatttcctggacagaaaggagaaaagggagactctttacacgtaactaca
aaaggcaccaaagggatccgaggagaccctgggctgcctggaatcagaggtgaggatggt
ttcccaggcagagatggattggatggtttaccaggacagcctggccttccgggtgattct
ctcagaggtttccctggtgatcctggttatccaggtgaattaggcccaaagggctttcca
ggagaagcaggcctgccaggtgaaggatttcctggtccaaaaggcttccggggtcctcca
ggtgaccaaggacaagctggaagcccaggatctccaggtctgcctggtctgccaggagag
cctggccaactagactgtgggcaggtcattgaagactttcctagaggagatgcaaccgaa
ccaatatggtcaggtgcaggctgtgtaaggccaccaaagggatcccaaggaaagccagga
gtgccaggagccacaggtgcaaaaggtgcaagaggattcccaggtgatccaggtccaatg
ggttttccagggctaaatggtacacgaggtgatccaggtcgagaaggattcccaggtcct
ccaggtttcactggacctaggggagacagaggcccaaatgggctacctggactgcaggga
cacccaggacttacaggaaaatccggagctccaggagcaccaggaccgaagggccttcct
ggtgacgtttttggagcagcagcaggggcccgaggggatgtcggcctccccggctttcca
gggctgaaaggtgcaccaggagatcaaggagtaccaggaactagaggagcggatggtagc
ccaggttcgccaggacccaaaggagatccagggccacaaggtctccctggtttgatggga
ttaccaggaacaccaggaacacgtggattcccaggtccaccaggaaaccgtgggccagat
ggtggccctggctctcaaggacctcttggtccacctggtgctaggggagaagatggtgag
caaggttttcctggccccgtgggcctgaagggtctatctggtgacaaaggtgacatgggt
cacacaggactgccaggtatacgtggtatgactggtccccctggcataagtggaatggat
ggctttccaggagataaaggcttgaaaggttcacccggcattgatggtttcaaaggcatg
acaggcctaaaaggaagaccaggcatcaagggaatcaaaggagaatttggcccacttggg
gctcagggagataaaggctcacagggtgcacatggcttcaaaggtgaccgtggggatcaa
ggccccccaggagaccctccaaagctcatgcccagcatgatgatggaagttaaaggtgaa
aaaggagatgttggagaaaggggcacaaagggattctttggcttaaaaggtagcaaggga
atgccaggccttcctggaaagacaggatccccagggtcccctgggcatcccagctacgtg
gctggtgtgaaaggagacattggcgcgaaagggctgacaggtgtgaaagggtatcctggt
cctgctggttctcctggcatcagaggcttccctggcaccacaggagtcaggggagaaaag
ggcattccaggaatttcaggccattttggtactcctggctcacatggagaaataggtgat
cggggagatactataaacttaccaggagcagtaatgccaggcctgaaaggggaagttggt
gtgccaggcttaacaggcataagaggaggtgtgggaccaaaaggagaaggtggtgatcct
ggtttccctggaattgaaggcctcaagggcacgcagggtgtccctggctctgtgggacag
gaaggtttgccaggactggttggccccccagggcagcaaggaagccctgggactcctgga
cttacaggtcaaaagggagctcctggctggcctggcttaccaggacaagcaggccagcct
ggcttcaggggaatcagtggactgcatggtttaccaggcactaagggcttaccaggatca
ccaggtccagatgggtacggctctgcaggtttcccaggtgcagcgggggacaaaggagaa
gcaggagagccaagcagagtagaaggcagccgaggacctccaggccagaagggagagaga
ggtgttccaggagtcccaggatcctttggtattcctgggcaggaaggatttccagggcct
cctgggatttcaaatatatcaggatatcctggtgataaaggctccccaggtctagatgga
gtgccaggctatccaggaccacaggggcagcctggaacacctgctccaccaggaagcaaa
ggagaaagtggagaagcaggtaggactggagaaatcggcccaaaaggaagtagaggtgat
cctggattatcaggaagtcctggcctgcctggattgcctggaccaaaaggtcccaggggt
gaacaaggtgtcattggctttatgggcacagtaggatttccaggtgacctgggacccatt
ggacccaagggggatagaggagtaacaggcttccagggacctccaggctctcctgggcga
gcccctgatcctccaaggctggttgctgagcaaggttcaccaggtccccgtggaagtatc
ggacctcagggaagcccaggagatatgggacctcagggcccaccaggagatccaggtttc
agaggctcaccaggagagccaggactccagggcaggggtggcattccagcttctcctggc
tccagaggggaacaaggaggaatgggatttcagggtccagtgggatttgaaggccagcca
ggccggcccggcagccctgggcccccaggcatgccgggccgcagtgtcagcatgggctac
ctgctggtgaagcacagccagtccgaccaagagccaatgtgcccagtgggcatgaacaaa
ctctggagtggatacagcctactgtattttgaaggacaagaaaaagcacacaaccaggat
ctagggctggctggctcgtgtttgtctcgctttagcaccatgccattcctctactgtaac
cctggggatatttgctactatgcaagtcgaaatgataaatcctactggctctcaaccaca
gcacctctcccaatgatgcccgtggcagaagaagacattaagccatatatcagtcgctgc
tcagtctgtgaggccccagctgtggcaattgctgtccacagccaagaagcttctattcct
cactgccctgaaggctggcgcagtttgtggatcggatattccttccttatgcacactgct
gctggtgatgaaggtggaggacagtcgctggtttctcctgggagctgcctggaggatttc
agggcgactcctttcatcgaatgcaacggcgcccgcggaacctgtcactactttgcaaac
aaatacagcttctggctcaccaccatcgaccagcccttccaaagcaagccctcgggagac
acactcaaggcaggactcatccgaagccatatcagcagatgtcaagtctgtatgaaaaac
ttatag

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