Geospiza fortis (medium ground-finch): 102044274
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Entry
102044274 CDS
T03755
Symbol
PDGFRA
Name
(RefSeq) platelet derived growth factor receptor alpha
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04010
MAPK signaling pathway
gfr04020
Calcium signaling pathway
gfr04144
Endocytosis
gfr04510
Focal adhesion
gfr04540
Gap junction
gfr04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
102044274 (PDGFRA)
04020 Calcium signaling pathway
102044274 (PDGFRA)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102044274 (PDGFRA)
09144 Cellular community - eukaryotes
04510 Focal adhesion
102044274 (PDGFRA)
04540 Gap junction
102044274 (PDGFRA)
09142 Cell motility
04810 Regulation of actin cytoskeleton
102044274 (PDGFRA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
gfr01001
]
102044274 (PDGFRA)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
gfr04090
]
102044274 (PDGFRA)
Enzymes [BR:
gfr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
102044274 (PDGFRA)
Protein kinases [BR:
gfr01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
102044274 (PDGFRA)
CD molecules [BR:
gfr04090
]
Proteins
102044274 (PDGFRA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
VEGFR1-3_N_Ig-like
VEGFR-1-like_Ig-like
V-set
Ig_6
Adeno_E3_CR1
Kinase-like
Motif
Other DBs
NCBI-GeneID:
102044274
NCBI-ProteinID:
XP_005415550
UniProt:
A0A6I9HBB1
LinkDB
All DBs
Position
Un
AA seq
1087 aa
AA seq
DB search
MGTYPQAFLILGCFLTGPFLTFCQLPLPTIVPNRNEMVVQLYSNFTLKCSGDSEVSWQYP
VTEGNHRIDIRHEENNSGLFVTVLEVGNASAAHTGLYVCYYNHTQVEDGEVEGKDIYIYV
PDPDMPFVPSIPEDQFILVEEGDPAVIPCRTSDPEAQVTLVNSLDKSVHALYDAKQGFIG
NFPAGSYTCKTMVKGVEFKSDEFLIYIIRATSQLPVEIEALKTVYKTGETIVVTCVVFDN
EVVNLQWNYPGKVKEKGLIKLDDIKVPSQKLVYTLTIPEASVKDTGDYECTARHATKEVK
ENKKVAITVHDKGFVHLEPQFSPREAVNLHEVKNFIVDVQAYPAPKMYWLKDNVTLIENL
TEILTTSVRVQETSFQSILKLIRAKEEDSGYYTLVAENEDEIKRYTFSLLIQVPALISAL
VDDHHGSAGGQTVRCLAEGTPLPDVEWLVCKDIKKCNNDTSWTLLTNNISDIHMEARLDE
KNMVESQVTFQKVDETLAVRCVARNDLGAVTRELKLVAPTLRSELTVAAAVLVLLVIVII
SLIVLVIIWKQKPRYEIRWRVIESISPDGHEYIYVDPMQLPYDSRWEFPRDGLVLGRILG
SGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNL
LGACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLNRHPEKPKKDLDIFGMNPVDESTRSY
VILSFENTGEYMDMKQADTTQYVPMLERKEGSKYSDIQRSVYDRPASYKKKSMSESEVKN
LLSDDSSEGLSLLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLA
RDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMM
VDSTFYNKIKSGYRMAKPDHATNEVYEIMVKCWNSEPEKRPSFYHLSEIVESLLPGEYKK
SYEKIHLDFLKSDHPAVTRMRGDCDNAYIGVTYKNEDKLKDRESGFDEQRLSADSGYIIP
LPDIDPVSEDELGKRNRHSSQTSEESAIETGSSSSTFIKREDETIEDIDMMDDIGIDSSD
LVEDSFL
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgggtacttacccacaggcattcctgatcctgggatgttttctcacaggaccattccta
accttctgccagcttcctctgccaactattgttcccaataggaatgaaatggtggtacag
ctatattccaatttcacactcaaatgctctggagacagcgaagtgagctggcagtaccca
gtgaccgagggaaaccacaggatagacatcagacacgaagagaacaacagtggcctcttc
gtgacagtgctcgaagtagggaatgcctcggccgcccatacaggcctgtatgtctgctac
tacaaccacacacaggtggaggatggtgaggtggaaggcaaggacatctacatctacgtg
cctgacccagacatgccttttgttccttctataccagaagaccagttcatcctggtagaa
gaaggtgatcctgcagttatcccttgtcggacaagtgacccagaggctcaagtgacttta
gttaacagtttagacaagtctgtgcatgctttatatgacgccaaacaaggcttcataggg
aattttcctgcaggctcatacacgtgcaaaacaatggttaaaggtgtggagttcaagtct
gatgagttcctcatctatattataagagctacttcacagctgcctgttgaaattgaagct
cttaaaactgtctacaaaacaggagagactatcgtagtaacttgtgtggtctttgacaat
gaggtggttaatttacagtggaattaccctgggaaagtgaaagaaaaaggtctgataaaa
ctggatgatatcaaagtgccatcacagaagctggtttacaccctgaccattcctgaagca
tcggtgaaagacacaggggattatgaatgtactgctcggcatgcaaccaaggaggttaag
gaaaataagaaagtagccattacagttcatgacaaaggctttgttcacctggagcctcag
ttcagccctcgggaagctgtcaacttgcatgaagtcaaaaactttattgttgatgtgcag
gcttacccagcaccaaaaatgtactggttgaaggataatgtgactctgattgaaaatctt
acagagattctcactacttcagtaagagtccaggaaacaagctttcagagtattttaaaa
ttgatacgggccaaggaggaagacagtggatactatactttggttgcagagaatgaagat
gagattaaaagatacaccttctcactgctaatacaagttccagctctgatctcagccctc
gtggatgatcaccatggctctgcaggtgggcagacagtgagatgcttggcagaggggacc
ccacttcccgatgtggaatggctggtttgcaaggacattaaaaagtgcaacaatgacacc
tcatggacccttttgactaacaatatctctgatatacatatggaagcccgcctggatgag
aaaaatatggtggaaagccaggtgaccttccagaaggtagatgaaaccctggctgtgcga
tgtgtggcaaggaatgacctcggtgctgttactcgagaactgaagcttgtggctcccacc
ttgagatcagagctaactgtggctgctgctgtcttagtgctgttagtgattgtgataatt
tcactgattgtcctggtcatcatatggaaacagaagcccagatatgagatcagatggaga
gtcattgagtccatcagccctgatggccatgagtatatttatgtggacccaatgcaactg
ccttatgactccagatgggagtttcctcgagatgggttagtgcttggtcggatccttggt
tcgggtgcatttggaaaagtggttgaagggactgcatatggattgagccgctctcaacca
gtgatgaaagtagctgtgaaaatgctgaaacctacagctagatccagtgaaaaacaggca
ctcatgtctgaactgaagataatgacacatcttggtccccacctgaatattgtgaatctg
cttggagcttgtacaaaatcaggtcccatttacatcattactgaatactgtttttatgga
gatctggtgaactacctgcataagaatagggacaatttcctgaacagacaccccgaaaag
cctaaaaaagacttggatatctttgggatgaaccccgttgatgaaagcacaagaagttat
gtgatactgtcatttgaaaacactggagaatacatggacatgaaacaagctgataccact
cagtatgtgccaatgctggaaaggaaggagggctctaaatactctgatatccagagatct
gtgtacgatcggcctgcttcatataagaagaaatccatgtcagaatcagaagtcaaaaac
cttctttcagatgacagttcagagggcctcagcttattggatttgctgagcttcacctac
caggttgcacggggaatggaattcttggcttctaaaaattgtgtgcaccgtgacttggcc
gctcgtaatgtcctcctggctcaaggaaaaattgtgaagatctgtgactttgggctggct
agagacatcatgcatgattccaactatgtctccaagggcagtactttcctcccagtaaaa
tggatggcacctgaaagcatttttgacaacctgtacacaacattaagtgatgtctggtct
tatggcattctgctgtgggaaatattttctcttggtggcacaccttatcctggcatgatg
gtcgattctactttctacaataagatcaagagtggataccgaatggccaaacccgatcat
gccaccaatgaagtgtatgagattatggtgaagtgctggaacagtgaaccagagaaaaga
ccttctttctaccatttgagtgaaattgtggagagcttgctgcctggagagtacaaaaag
agctatgagaagattcatctggacttcctgaaaagtgatcacccagctgtcacacgcatg
agaggggactgtgacaatgcttacattggtgtaacttacaagaatgaagacaagctaaag
gacagggagagtggatttgacgagcagaggctgagtgctgacagtggatacatcattccc
ctgcctgacattgaccctgtttctgaagatgagcttggcaaaaggaacagacacagttca
cagacatctgaagaaagtgccattgaaactggttccagtagctctaccttcatcaagaga
gaggacgagaccattgaggacattgacatgatggacgacattggcatcgactcctcagac
ctggtggaggacagcttcctgtaa
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integrated database retrieval system
