Geospiza fortis (medium ground-finch): 102044306
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Entry
102044306 CDS
T03755
Symbol
IFT140
Name
(RefSeq) intraflagellar transport 140
KO
K19672
intraflagellar transport protein 140
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gfr03037
]
102044306 (IFT140)
Cilium and associated proteins [BR:
gfr03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
102044306 (IFT140)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ANAPC4_WD40
Coatomer_WDAD
WD40
Rax2
Motif
Other DBs
NCBI-GeneID:
102044306
NCBI-ProteinID:
XP_005425248
UniProt:
A0A6I9HLQ8
LinkDB
All DBs
Position
Un
AA seq
1453 aa
AA seq
DB search
MAVYVDHRTDAPDSVASPSHIAWHPLHPLLAVASISTAGGGCVDIYLEQGEHVPDSHVER
SFQVTLLAWHPSRPILASGWETGGVLILNKQDKEQHTVPPNHSAKITVLSWSTSGTCLVS
GDGHGVLCLWKMDHRGRVQGPALVKQEYGKCLWHCVFRPPPPSEDFVQLAKAAVSGDEKA
LDMFNWKKAGIGLPLKRAVQEGLSFFISLTDGSVHYVNEEGKTRQVLSTDSLVRKLLLLE
ERDVLLVITETLQLSLHAVSPEGEAEELMKVKLSGKTGHSADMILVDHSLVVTALGETVI
RFWDLDQDENYMLSLDMQFGFEGGECINCVSYCSAKGILAAGTSKGRVAMWKKAAGSHQS
TWALEGKEKWKFQASTELEGNVTQIKWGSRKNLLAVNNISSVVILSEQTMLAHFHQQVAV
VQVSPYLFNVTIFSTGTTHSLRVDMNASGVFATQDAVVFWNGKQVAVFECSGDTFRSAGS
FLCDSPVLSVHGENLYTVEPYRIQVRTWQGTVKQLLMFSEAEGNPCLLDVCGNFLAVGTD
LAHLKIFDLSRREAKVHCNSKSLSKLLPGRGDILSVKCNANGSKVSILVSRVDGNIDSKI
CFYDVEMDQVTLFDFKAEQGDGRENLSAGQSIGKFVAEYPELHSHIPACHFWDQSEPRLF
VCEAIPETGLQPPDQKKIQVEGTMDVWIISFFSTEEHGLLLQDSFPLPSSYQLLLGIEVP
HYYFAKKLGEAEKGASESGSGTVSQMAARRPMRDFTGLGDCDKTTQDAMLNFSYYLTAGD
MDEAFKSIKLIKSEAVWENMARMCVKTQRLDVAKICLGHMGHARGAKALREAEQEPEQKA
RVAVLAIQLGMLEDAERLYKDCRRYDLLNKFYQASNQWQKAIETAEAHDRVHLRTTHYNY
AKHLEATGQQSLALTHYEKSDTHRFEVPRMLSEDLQALENYINKMKDKSLWKWWAQYLES
QSDMESALKYYALAQDYFSLVRVHCFQGHIEKAAEIANETGNGAASYHLARQYESQEDIK
QAVHFYSRAQAFNNAIRLCKANNLNDQLMNLALLSSPEDMIEAACYYEEKGDQMDRAVML
YHKAGHFSKALELAFATQQFGALQLIAEDLDEKSDPALLARCSSFFIEHAQYEKAMELLL
TAKKYHEALQLCLEQNLTITEELAEKMTVSKESQDLSEESRRELLEQIADCCMRQGNYHI
ATKKYTQAGNKLKAMRALLKSGDTEKIIFFAGVSRQREIYIMAANYLQSLDWRKDAKIIA
NIISFYTKGGALDLLAGFYDACAQVEIDEYQNYEKAHRALTEAYKCLSKAKARSPVEQES
KLAHLQSRMSLMKRFIHAQRVYPEDTEEAVRQCELLLAEQDFDNAIRHGDVLGFLVQHYA
QVEEFHTAYRYLEEMQKRIPASNLSYYVSPQTMEAVHRGAGVPMSRAQAPEHSGHGSMDN
REEEEVADEVEDP
NT seq
4362 nt
NT seq
+upstream
nt +downstream
nt
atggctgtatacgtggatcatcgaacagatgctcctgattctgttgcctccccttcccac
atagcatggcacccacttcatccactcctggcagttgcttccatcagcacagcaggtggg
ggctgtgtggatatctacctggaacagggagaacatgtgcctgattcccatgttgagaga
agttttcaggtcacattacttgcctggcacccttccagacccattctggcatcaggatgg
gagacaggaggagttctgatactgaacaaacaagacaaggagcagcacactgtaccccca
aatcacagcgccaaaatcacagtcctgagctggagtacaagtggtacctgccttgtgtct
ggggatgggcacggtgtcttgtgtctctggaaaatggaccataggggcagagtgcagggt
cctgccctggttaagcaggagtatgggaaatgcttgtggcactgtgtctttcggccaccc
cctcctagcgaggactttgtacagctggcaaaagcagctgtgagcggtgatgagaaagcc
ttggatatgtttaactggaagaaagctggaataggactgcctctgaaaagagcagtccag
gaaggactctccttctttatctctttgacagatggttctgtgcactatgtgaatgaggaa
gggaagacaaggcaggtattgtctacagacagtctggtccgaaagctcctgttgctagag
gaaagagatgttttacttgtaataacagagactctgcagttgtctttacatgcagtttct
cccgagggagaagcagaagagctcatgaaggtgaagttgagtgggaagactggtcattct
gcagacatgattctagtagaccatagcctggttgttacagcactaggtgagacagtcatc
aggttctgggatttggatcaagatgagaactatatgctctccctagatatgcaatttggc
tttgaggggggagaatgtattaactgtgtttcttactgcagtgctaaaggtatcttggca
gctggaactagcaaggggagagtagcaatgtggaagaaagcagcaggatctcatcagagc
acatgggctttggagggcaaagagaagtggaagttccaggcatctacagaacttgaagga
aatgtcactcagataaagtgggggtcccgaaaaaacctgctggcagtgaacaacatcagc
tctgtggtgatcctcagtgagcagaccatgttggcacattttcatcagcaggtggctgtg
gtacaggtgtctccctacctcttcaatgtgacaatcttcagcacaggaaccactcacagc
cttcgtgttgacatgaatgctagtggagtctttgctactcaggatgctgtagtattctgg
aatgggaagcaagtggctgtctttgagtgctcaggtgataccttcagaagtgcaggctct
ttcctttgtgactctccagttctgtctgttcatggagaaaatctgtacacagtggagccg
tatcggatccaggtccgcacctggcagggcacagtaaaacagctgctcatgttctctgaa
gcagaggggaatccgtgcctcctggatgtctgtgggaatttcctggctgtgggaactgat
ctggctcacttgaaaatctttgatctctcacgcagagaggcaaaagtgcactgcaacagc
aagagtttatccaagctgcttcctggccgtggagacattttgtctgtgaagtgcaatgct
aatggcagcaaagtcagcatccttgtcagcagggtggatgggaacatcgattccaagatt
tgtttctatgatgttgaaatggaccaagttacgctctttgatttcaaggctgaacaggga
gatggtagagagaatctttctgctggacaaagcattggcaagtttgtagcggagtatcca
gagttgcacagtcacatccctgcttgccatttctgggaccagagtgaaccaagacttttt
gtatgtgaagcaattcctgaaacaggcctccaacctccagaccaaaagaaaatccaggtt
gagggcacaatggatgtttggattatatcattcttcagcactgaagagcatggccttttg
ctgcaggacagctttccattgccttcatcctaccagcttcttctcggcatagaggtgcca
cattattactttgcaaaaaagctgggagaagctgagaagggagcatcagagtctggctca
ggaacagtctctcagatggctgcaagaagacccatgagagatttcactggactgggagac
tgtgataagaccacccaggatgccatgctgaacttcagctactatctcactgctggagac
atggatgaggccttcaaatccatcaagctgataaaaagtgaggctgtctgggagaacatg
gctcgcatgtgtgtgaagactcagaggctcgatgttgccaaaatttgcctggggcacatg
ggtcatgccagaggagccaaggcactgcgggaggctgagcaagagccagagcagaaggcc
agggtggctgtgctggccatccagctgggcatgctggaggacgcagagcggctgtacaag
gattgcagacgctatgacctcttgaacaagttctaccaggcctccaaccagtggcagaaa
gccatcgaaacggccgaggctcatgaccgagttcacctgcgcaccacccactacaactac
gccaagcacctggaggcaaccgggcagcagagcctggcactcacccactatgaaaagtca
gacacacacaggtttgaggtacctcgaatgctctctgaagacctacaagcactggagaac
tacatcaacaagatgaaagacaagagcctgtggaagtggtgggcacagtacttggagagc
cagtcagacatggagtccgcattaaaatactatgcactggctcaggattatttttcccta
gtccgtgttcactgctttcaaggccacattgagaaggctgctgaaatagcaaatgaaacg
gggaatggggcagcctcctatcacctggcacgccagtacgagagtcaggaggatatcaag
caggccgtgcacttctacagccgggcccaggcgttcaacaacgccatccgcttgtgcaag
gcgaataatttaaatgatcagctgatgaacctggctctcctgagctcaccagaagacatg
atagaggcagcctgctattatgaggaaaagggagatcaaatggacagagctgttatgtta
taccacaaggcaggacacttctccaaagccctggagctggcctttgccacgcagcagttt
ggggccctacagctcattgctgaggacctggatgagaaatctgacccagccctgctcgcc
cgctgctccagcttcttcattgaacatgctcagtatgagaaggcaatggagctgctgctc
acagccaagaagtaccacgaagctctgcagctctgcctggagcagaacctaaccatcacc
gaggagctggctgagaagatgacagtctccaaggaatcccaggatctctctgaggagtcc
cggagagagctgctggagcaaattgctgactgctgcatgagacaaggcaactaccacatt
gccaccaagaaatacacacaagcaggaaacaagttaaaggctatgagggcattactgaaa
tctggagatactgagaaaattatcttctttgcgggagtttccagacagagagaaatttac
atcatggcagccaactacctgcagtcactggattggcgcaaggacgcaaagattattgca
aatatcatcagcttctacaccaaaggaggggcccttgacctcctggcaggtttctatgat
gcatgtgctcaggtagaaatcgatgagtatcagaactatgaaaaagcccacagagcactg
acagaagcatacaagtgcctttccaaagcaaaggccagaagccctgtggaacaagaaagc
aaacttgctcacctgcagagcaggatgagtctgatgaagcggttcatccatgctcagaga
gtttaccctgaagacactgaagaagcagtcaggcagtgtgaactgctcctggctgaacag
gactttgacaatgccatccggcatggtgacgtcctgggatttttggttcagcattatgca
caagtggaggaattccatacagcttatcgctacctggaagagatgcagaaaagaattcca
gcctcaaacctgagctactatgtgtccccacagaccatggaggctgtgcaccgaggagct
ggtgttcccatgagccgagcccaggccccagaacactccggccatggcagcatggacaac
agggaggaggaagaagtggctgatgaagtggaggacccctga
DBGET
integrated database retrieval system