Geospiza fortis (medium ground-finch): 102044306 Help Entry 102044306         CDS       T03755                                  Symbol IFT140 Name (RefSeq) intraflagellar transport 140   KO K19672   intraflagellar transport protein 140 Organism gfr  Geospiza fortis (medium ground-finch) Brite KEGG Orthology (KO) [BR:gfr00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:gfr03037]     102044306 (IFT140) Cilium and associated proteins [BR:gfr03037]  Primary cilia and associated proteins   Intraflagellar transport (IFT) complex A    102044306 (IFT140) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TPR_IF140-IFT172 Beta-prop_IFT140_1st Beta-prop_IFT140_2nd TPR_IF140_C WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR19_1st WD40_WDHD1_1st Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_EML WD40_Prp19 Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 TPR_IFT80_172 Beta-prop_HPS5 TPR_GEMI5 WDR55 TPR_COPA_B WD40 Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_TEP1_2nd Clathrin Rax2 Motif Other DBs NCBI-GeneID:  102044306 NCBI-ProteinID:  XP_005425248 UniProt:  A0A6I9HLQ8 LinkDB All DBs Position Un AA seq 1453 aa AA seqDB search MAVYVDHRTDAPDSVASPSHIAWHPLHPLLAVASISTAGGGCVDIYLEQGEHVPDSHVER SFQVTLLAWHPSRPILASGWETGGVLILNKQDKEQHTVPPNHSAKITVLSWSTSGTCLVS GDGHGVLCLWKMDHRGRVQGPALVKQEYGKCLWHCVFRPPPPSEDFVQLAKAAVSGDEKA LDMFNWKKAGIGLPLKRAVQEGLSFFISLTDGSVHYVNEEGKTRQVLSTDSLVRKLLLLE ERDVLLVITETLQLSLHAVSPEGEAEELMKVKLSGKTGHSADMILVDHSLVVTALGETVI RFWDLDQDENYMLSLDMQFGFEGGECINCVSYCSAKGILAAGTSKGRVAMWKKAAGSHQS TWALEGKEKWKFQASTELEGNVTQIKWGSRKNLLAVNNISSVVILSEQTMLAHFHQQVAV VQVSPYLFNVTIFSTGTTHSLRVDMNASGVFATQDAVVFWNGKQVAVFECSGDTFRSAGS FLCDSPVLSVHGENLYTVEPYRIQVRTWQGTVKQLLMFSEAEGNPCLLDVCGNFLAVGTD LAHLKIFDLSRREAKVHCNSKSLSKLLPGRGDILSVKCNANGSKVSILVSRVDGNIDSKI CFYDVEMDQVTLFDFKAEQGDGRENLSAGQSIGKFVAEYPELHSHIPACHFWDQSEPRLF VCEAIPETGLQPPDQKKIQVEGTMDVWIISFFSTEEHGLLLQDSFPLPSSYQLLLGIEVP HYYFAKKLGEAEKGASESGSGTVSQMAARRPMRDFTGLGDCDKTTQDAMLNFSYYLTAGD MDEAFKSIKLIKSEAVWENMARMCVKTQRLDVAKICLGHMGHARGAKALREAEQEPEQKA RVAVLAIQLGMLEDAERLYKDCRRYDLLNKFYQASNQWQKAIETAEAHDRVHLRTTHYNY AKHLEATGQQSLALTHYEKSDTHRFEVPRMLSEDLQALENYINKMKDKSLWKWWAQYLES QSDMESALKYYALAQDYFSLVRVHCFQGHIEKAAEIANETGNGAASYHLARQYESQEDIK QAVHFYSRAQAFNNAIRLCKANNLNDQLMNLALLSSPEDMIEAACYYEEKGDQMDRAVML YHKAGHFSKALELAFATQQFGALQLIAEDLDEKSDPALLARCSSFFIEHAQYEKAMELLL TAKKYHEALQLCLEQNLTITEELAEKMTVSKESQDLSEESRRELLEQIADCCMRQGNYHI ATKKYTQAGNKLKAMRALLKSGDTEKIIFFAGVSRQREIYIMAANYLQSLDWRKDAKIIA NIISFYTKGGALDLLAGFYDACAQVEIDEYQNYEKAHRALTEAYKCLSKAKARSPVEQES KLAHLQSRMSLMKRFIHAQRVYPEDTEEAVRQCELLLAEQDFDNAIRHGDVLGFLVQHYA QVEEFHTAYRYLEEMQKRIPASNLSYYVSPQTMEAVHRGAGVPMSRAQAPEHSGHGSMDN REEEEVADEVEDP NT seq 4362 nt NT seq  +upstreamnt  +downstreamnt atggctgtatacgtggatcatcgaacagatgctcctgattctgttgcctccccttcccac atagcatggcacccacttcatccactcctggcagttgcttccatcagcacagcaggtggg ggctgtgtggatatctacctggaacagggagaacatgtgcctgattcccatgttgagaga agttttcaggtcacattacttgcctggcacccttccagacccattctggcatcaggatgg gagacaggaggagttctgatactgaacaaacaagacaaggagcagcacactgtaccccca aatcacagcgccaaaatcacagtcctgagctggagtacaagtggtacctgccttgtgtct ggggatgggcacggtgtcttgtgtctctggaaaatggaccataggggcagagtgcagggt cctgccctggttaagcaggagtatgggaaatgcttgtggcactgtgtctttcggccaccc cctcctagcgaggactttgtacagctggcaaaagcagctgtgagcggtgatgagaaagcc ttggatatgtttaactggaagaaagctggaataggactgcctctgaaaagagcagtccag gaaggactctccttctttatctctttgacagatggttctgtgcactatgtgaatgaggaa gggaagacaaggcaggtattgtctacagacagtctggtccgaaagctcctgttgctagag gaaagagatgttttacttgtaataacagagactctgcagttgtctttacatgcagtttct cccgagggagaagcagaagagctcatgaaggtgaagttgagtgggaagactggtcattct gcagacatgattctagtagaccatagcctggttgttacagcactaggtgagacagtcatc aggttctgggatttggatcaagatgagaactatatgctctccctagatatgcaatttggc tttgaggggggagaatgtattaactgtgtttcttactgcagtgctaaaggtatcttggca gctggaactagcaaggggagagtagcaatgtggaagaaagcagcaggatctcatcagagc acatgggctttggagggcaaagagaagtggaagttccaggcatctacagaacttgaagga aatgtcactcagataaagtgggggtcccgaaaaaacctgctggcagtgaacaacatcagc tctgtggtgatcctcagtgagcagaccatgttggcacattttcatcagcaggtggctgtg gtacaggtgtctccctacctcttcaatgtgacaatcttcagcacaggaaccactcacagc cttcgtgttgacatgaatgctagtggagtctttgctactcaggatgctgtagtattctgg aatgggaagcaagtggctgtctttgagtgctcaggtgataccttcagaagtgcaggctct ttcctttgtgactctccagttctgtctgttcatggagaaaatctgtacacagtggagccg tatcggatccaggtccgcacctggcagggcacagtaaaacagctgctcatgttctctgaa gcagaggggaatccgtgcctcctggatgtctgtgggaatttcctggctgtgggaactgat ctggctcacttgaaaatctttgatctctcacgcagagaggcaaaagtgcactgcaacagc aagagtttatccaagctgcttcctggccgtggagacattttgtctgtgaagtgcaatgct aatggcagcaaagtcagcatccttgtcagcagggtggatgggaacatcgattccaagatt tgtttctatgatgttgaaatggaccaagttacgctctttgatttcaaggctgaacaggga gatggtagagagaatctttctgctggacaaagcattggcaagtttgtagcggagtatcca gagttgcacagtcacatccctgcttgccatttctgggaccagagtgaaccaagacttttt gtatgtgaagcaattcctgaaacaggcctccaacctccagaccaaaagaaaatccaggtt gagggcacaatggatgtttggattatatcattcttcagcactgaagagcatggccttttg ctgcaggacagctttccattgccttcatcctaccagcttcttctcggcatagaggtgcca cattattactttgcaaaaaagctgggagaagctgagaagggagcatcagagtctggctca ggaacagtctctcagatggctgcaagaagacccatgagagatttcactggactgggagac tgtgataagaccacccaggatgccatgctgaacttcagctactatctcactgctggagac atggatgaggccttcaaatccatcaagctgataaaaagtgaggctgtctgggagaacatg gctcgcatgtgtgtgaagactcagaggctcgatgttgccaaaatttgcctggggcacatg ggtcatgccagaggagccaaggcactgcgggaggctgagcaagagccagagcagaaggcc agggtggctgtgctggccatccagctgggcatgctggaggacgcagagcggctgtacaag gattgcagacgctatgacctcttgaacaagttctaccaggcctccaaccagtggcagaaa gccatcgaaacggccgaggctcatgaccgagttcacctgcgcaccacccactacaactac gccaagcacctggaggcaaccgggcagcagagcctggcactcacccactatgaaaagtca gacacacacaggtttgaggtacctcgaatgctctctgaagacctacaagcactggagaac tacatcaacaagatgaaagacaagagcctgtggaagtggtgggcacagtacttggagagc cagtcagacatggagtccgcattaaaatactatgcactggctcaggattatttttcccta gtccgtgttcactgctttcaaggccacattgagaaggctgctgaaatagcaaatgaaacg gggaatggggcagcctcctatcacctggcacgccagtacgagagtcaggaggatatcaag caggccgtgcacttctacagccgggcccaggcgttcaacaacgccatccgcttgtgcaag gcgaataatttaaatgatcagctgatgaacctggctctcctgagctcaccagaagacatg atagaggcagcctgctattatgaggaaaagggagatcaaatggacagagctgttatgtta taccacaaggcaggacacttctccaaagccctggagctggcctttgccacgcagcagttt ggggccctacagctcattgctgaggacctggatgagaaatctgacccagccctgctcgcc cgctgctccagcttcttcattgaacatgctcagtatgagaaggcaatggagctgctgctc acagccaagaagtaccacgaagctctgcagctctgcctggagcagaacctaaccatcacc gaggagctggctgagaagatgacagtctccaaggaatcccaggatctctctgaggagtcc cggagagagctgctggagcaaattgctgactgctgcatgagacaaggcaactaccacatt gccaccaagaaatacacacaagcaggaaacaagttaaaggctatgagggcattactgaaa tctggagatactgagaaaattatcttctttgcgggagtttccagacagagagaaatttac atcatggcagccaactacctgcagtcactggattggcgcaaggacgcaaagattattgca aatatcatcagcttctacaccaaaggaggggcccttgacctcctggcaggtttctatgat gcatgtgctcaggtagaaatcgatgagtatcagaactatgaaaaagcccacagagcactg acagaagcatacaagtgcctttccaaagcaaaggccagaagccctgtggaacaagaaagc aaacttgctcacctgcagagcaggatgagtctgatgaagcggttcatccatgctcagaga gtttaccctgaagacactgaagaagcagtcaggcagtgtgaactgctcctggctgaacag gactttgacaatgccatccggcatggtgacgtcctgggatttttggttcagcattatgca caagtggaggaattccatacagcttatcgctacctggaagagatgcagaaaagaattcca gcctcaaacctgagctactatgtgtccccacagaccatggaggctgtgcaccgaggagct ggtgttcccatgagccgagcccaggccccagaacactccggccatggcagcatggacaac agggaggaggaagaagtggctgatgaagtggaggacccctga

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