Geospiza fortis (medium ground-finch): 102044378
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Entry
102044378 CDS
T03755
Symbol
CDHR1
Name
(RefSeq) cadherin related family member 1
KO
K16501
cadherin-related family member 1
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gfr04515
]
102044378 (CDHR1)
Cell adhesion molecules [BR:
gfr04515
]
Cadherins
Cadherin related
102044378 (CDHR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Motif
Other DBs
NCBI-GeneID:
102044378
NCBI-ProteinID:
XP_005417344
UniProt:
A0A6I9HCN8
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All DBs
Position
Un
AA seq
865 aa
AA seq
DB search
MKHVRHFTPSLFLSLVHVCLVQANYAPYFFDNGARSTNGNMALLSLSEDTPVGTHVYTLN
GTDPEGDPVTYGLTYEAGSRRYFSVDKNLGNVTLIEELDREKEDEIEVIVSISDGLSTVS
EKVRILVMDANDESPEFINTPYIVQVPENTPSSSSIFKIEAIDKDTGSGGSITYFLQNIH
ANKFTIDRHSGVLRIKPGVTLDYEKSRTHFVVVVAKDGGGKLRGDNKVFSATTTVTINVE
DVQDTPPMFIGTPYYGYVYEDTLAGSEVLTVVALDGDRGKPNSIHYCIVNGSEGSFEISN
TTGAISVIKSPNQLKKEVYELKVKASEVSREGDISEHTFAMVTIRVVDLNNHPPTFYGEN
GPQNRFELTMYEHPPEGEILRGLKITVNDSDQGANAKFNLRLVGPGGIFRVVPQTVLNEA
QVTIIVENSAAIDYESFKVLTFKLLAIEVNTPEKFSSTADVVIRLLDTNDNVPKFSSDYY
IARIPENSPGGSNVVAVTATDPDSGLWGEIKYSIYGTGADLFLIHPSTGIIYTQPWAVLD
AEVSSKYNFYVKAEDTDGKYSLAEVFITVLDVNDHSPEFNENIQEKTMIIGSPVKIEAID
QDAEEPNNIVDYSIMQADPANVFDIDQSTGEIKLKSYIRSLDIIHNITNNKDCIWSLVVQ
AKDRGSPSFSTTAVLKIDITEETLHKGPMAAFLMQTKDNPMKALGVLAGVMGIMVLITIM
ISTAMFWRNKRSNKVMPVRRIIKKRQVPPSRTVRMEWLKFKRPSNAAEKFVVEEDVKSLH
NENSNNNVQVVPVLPAAPVPPPPPALAPRGDGPGWRVPTVSGSLTPKHVIKPPKKKGHSS
THNALVSELKMRFEKRNAAFGEPHI
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgaagcatgtaaggcatttcaccccctccttatttctcagtttggtgcatgtttgcctg
gttcaggcaaattatgccccctatttctttgataatggagccagaagcacaaacgggaac
atggcacttctcagcctttcagaggacacgcctgttggcacccatgtgtacactctgaat
ggaactgacccagaaggagatcctgtgacatatggcctgacctatgaagctggatcaagg
cgttacttttctgttgacaagaatcttggaaatgttaccttgattgaagagcttgacaga
gagaaggaagatgaaattgaagttattgtcagtatttcagatggcctgagtacagtttct
gaaaaagtcaggatccttgtaatggatgccaatgatgagagcccagagttcatcaataca
ccttacatagtccaagtcccagagaacactccctccagcagcagcatctttaagattgag
gcaatagacaaagacacgggttctggaggaagcattacctacttcttgcagaacatccat
gctaacaagttcacgatagaccgtcacagcggcgtcctgcgcatcaaacctggggtcacc
ctggactacgagaaatcaagaacacattttgttgtggttgtagccaaggatggtggtggg
aagctcaggggagacaacaaagtcttttcagccacaacaacagttactatcaacgtggag
gatgttcaggacacccccccaatgttcattgggactccctactatggatatgtctatgag
gacacgcttgcaggctctgaggtcctcactgttgttgctcttgatggagacagaggaaag
cctaacagtattcattactgcatcgtgaatggaagtgaaggttcatttgaaatcagcaac
acaactggagccatttctgtgataaaaagcccaaatcagctcaagaaagaagtgtatgaa
cttaaagttaaggcatcagaagtcagtcgggaaggtgacatctccgagcacacatttgcc
atggtgaccatacgggtggtggacctcaacaaccacccaccaacattctatggagaaaat
gggcctcagaacaggtttgagctgaccatgtatgagcatcccccagagggtgaaatctta
cggggattgaagatcacagtcaatgattcagatcagggagccaatgctaaattcaacctc
cgtcttgttggacctggtggcatcttccgagtggttcctcaaactgtcctgaatgaagct
caggttacaataatagtggaaaattctgctgccattgactatgaaagtttcaaggtgtta
accttcaagcttcttgcaattgaggtgaacacaccggagaaattcagctcgacggctgac
gtggtgattcgcttgctggacaccaatgacaatgtccccaagttctcctctgactactac
attgccaggatccctgagaactccccagggggctccaatgtagttgctgttacagctaca
gatccagattcagggctttggggagaaatcaagtactctatctacggaacaggagcagat
ctgttcctaatccatccatcaacaggtataatttacacccagccctgggctgtgctagat
gctgaagtgagctcaaagtataatttctatgtgaaagcagaggacacagatgggaaatac
agcttggctgaagtgtttatcaccgtgctagatgtcaatgaccactctccagagttcaat
gaaaacatccaggagaagacaatgatcattgggtcaccagtgaagatagaggccatagac
caagatgcagaagagcccaacaacattgtggattattccatcatgcaagcagatccagcc
aatgtgtttgacatagaccaaagcaccggggagatcaagctgaaatcctatatcagatct
ctggacatcatccacaacatcacaaacaataaagactgcatatggtcactggtggtgcag
gccaaagacagaggctccccgtccttcagtaccacagcagttctgaagattgatatcaca
gaagagactcttcacaaagggcctatggccgcctttttgatgcaaactaaagataacccc
atgaaagccttaggagtgctagctggtgtcatgggcataatggtgctgataactatcatg
atctctactgccatgttctggcgcaacaagcggtccaacaaagtcatgccggtgaggagg
atcataaaaaagagacaggtgccaccatcccggacagtcaggatggagtggctgaagttc
aagaggcccagcaacgctgcagagaagtttgtggttgaggaggacgtgaagagcctacac
aatgagaacagcaacaataacgtgcaggttgtccccgtgctgccggcagcccccgtgccc
ccgccaccccctgccctggctccccgaggtgatggcccagggtggcgagtgccaaccgtg
tccggctccctcactcccaagcatgtcatcaagccaccgaagaagaaaggtcacagcagc
acccacaacgccctggtgtcagagctcaaaatgaggtttgagaagaggaacgcagctttt
ggggagccccacatctag
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