Geospiza fortis (medium ground-finch): 102044426
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Entry
102044426 CDS
T03755
Symbol
TRIM23
Name
(RefSeq) tripartite motif containing 23
KO
K07963
tripartite motif-containing protein 23 [EC:
2.3.2.27
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gfr04121
]
102044426 (TRIM23)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
gfr04031
]
102044426 (TRIM23)
Enzymes [BR:
gfr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102044426 (TRIM23)
Ubiquitin system [BR:
gfr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
102044426 (TRIM23)
GTP-binding proteins [BR:
gfr04031
]
Small (monomeric) G-proteins
Arf/Sar Family
Others
102044426 (TRIM23)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Arf
Roc
Ras
SRPRB
G-alpha
zf-RING_UBOX
zf-B_box
zf-RING_5
Gtr1_RagA
MMR_HSR1
zf-RING_2
zf-C3HC4
ANCHR-like_BBOX
CEBP_ZZ
Motif
Other DBs
NCBI-GeneID:
102044426
NCBI-ProteinID:
XP_005429352
UniProt:
A0A6I9HRL9
LinkDB
All DBs
Position
Un
AA seq
554 aa
AA seq
DB search
MVFFNLQVLECGVCEDVFSLQGDKVPRLLLCGHTVCHDCLTRLPLHGRAIRCPFDRQVTE
LGDSGVWGLKKNFALLELLERLQNGPAGQYGTAEEGIGLSGESIIRCDEDEAHVASVYCT
VCATHLCADCSQLTHSTKTLAKHRRVPLADKPHEKTMCSQHQVHAIEFVCLEEGCQASPL
MCCVCKEYGKHQGHKHSVLEPEANQIRASILDMAHCIRTFTEEISDYSRKLVGIVQHIEG
GEQIVEDGVGMAHTEHVPGTAENARSCVRAYFSDLHETLCRQEEMALSVVDAHVREKLIW
LRQQQEDMTILLSQVSTACLHCEKTLQQDDCRVVLAKQEITRLLETLQKQQQQFTELADH
VQLDASIPVTFTKDNRVHIGPKMEIRVVTLGLDGAGKTTILFKLKQDEFMQPIPTIGFNV
ETVEYKNLKFTIWDVGGKHKLRPLWKHYYLNTQAVVFVVDSSHRDRVSEAYSELAKLLTE
KELRDALLLIFANKQDVAGALPVEEITELLSLHKLCCGRSWYIQGCDARSGTGLYEGLDW
LSRQLVAAGVLDVA
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggtcttttttaacttacaggttcttgagtgtggggtctgtgaagatgtattttctctg
caaggggacaaagttccccggctgcttttgtgtggccatactgtctgccatgactgtctt
acccggcttccccttcatggcagagcaattcgttgtccttttgatcgacaagttactgaa
ctaggagattctggtgtctggggattgaaaaagaactttgctttgttggaactcttggaa
cggttgcagaatggacctgctgggcagtatgggacagctgaagaaggcattggtctgtct
ggagagagtatcattcgttgcgatgaagatgaagcccatgttgcatctgtgtattgcact
gtttgtgccactcacctgtgtgcagactgctcccagcttactcattctactaagactctg
gcgaagcacaggcgtgtacctcttgctgataagcctcacgagaagacgatgtgctcccaa
caccaagtgcatgccattgagtttgtttgtttagaagagggctgtcaggcgagtcctctc
atgtgttgtgtctgcaaagaatatgggaagcatcaaggtcataagcattctgtcttggaa
ccagaagcaaatcagattcgtgcatccattttagacatggctcactgtataagaactttc
acagaagaaatctctgattattccagaaaattagttggaattgttcagcatatagaagga
ggagaacaaatagttgaagatggagttggaatggcccatactgaacatgtaccaggaact
gcagagaatgcccgctcatgtgtcagagcctatttttctgatcttcatgaaaccctttgt
cgtcaggaagaaatggctcttagcgttgttgatgctcatgtgagagagaagttgatttgg
cttaggcaacagcaagaagatatgaccattctcctgtcacaggtttcaacagcttgcctt
cactgtgaaaagactttgcaacaggacgactgcagagtagtgttggccaaacaggaaatt
acaagattgctagagacattacagaaacagcagcagcagtttacagaacttgcagatcat
gtacagctggatgctagcatacctgtcacttttacaaaggacaacagggtacatattgga
ccaaaaatggaaattcgggttgttactttaggattagatggagctggcaaaacaactatt
ttgtttaagttaaagcaagatgaattcatgcagccaattccaacaataggttttaatgtt
gaaacagtagaatacaagaatttaaagtttactatatgggatgtaggaggaaagcacaaa
ttgaggcctttgtggaagcattattatctcaatacgcaagcggtggtgtttgttgttgat
agcagtcacagagacagggtcagtgaagcatacagtgaacttgcaaaattgttaacagag
aaggaattgcgggatgccttgctcttgatctttgctaataaacaggatgtagcaggtgct
cttccagtggaagaaatcacagaactgttgagtctccacaaactctgctgtggccgtagc
tggtatattcagggttgtgatgcccgaagtggtacaggactttatgaaggattggattgg
ctttcaaggcagctagtggctgctggtgtcctggatgtggcttaa
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integrated database retrieval system
