Geospiza fortis (medium ground-finch): 102044550
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Entry
102044550 CDS
T03755
Symbol
LRIT1
Name
(RefSeq) leucine rich repeat, Ig-like and transmembrane domains 1
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gfr04990
]
102044550 (LRIT1)
Domain-containing proteins not elsewhere classified [BR:
gfr04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
102044550 (LRIT1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
fn3
ig
Ig_2
Motif
Other DBs
NCBI-GeneID:
102044550
NCBI-ProteinID:
XP_005417345
LinkDB
All DBs
Position
Un
AA seq
630 aa
AA seq
DB search
MRLAVTLLCCWALAGLPRAGGSCXXXXPPRARGAFHSLGDGTKARTVLCNDPEMTLPPVN
IPVDTSKLRIEKTAIRRVPGEAFHLLHNLEYLWMPYNSLGSLSSITFKGLRRLQELRLAG
NNLISFPWESLAGMPQLRLLDLHNNELTSVPPDAARYVKNITYLDLSSNKLMTLPQALIA
TWANLQAVPYFPNDNSKIILGLQDNPWVCDCSLYEMVHFLNFQSPNIAFIEPRLKCFTPR
SLAGVFFSQVELRKCQSPVVHTSVAKVKTILGSTVLLRCGTTGVPIPELSWRRADGAQLN
GTVHQEISSDGMSWSILGLPVVSYLDSGEYICKAKNFLGATEAFISLIITDSESTDDPTS
SAKGTWNGKASGMEAAAYNDKLVARYVITTSTVPTLGAGAGTGDSVLLPDMAQDSNPQNL
LVSPTTGQQEPERMVRSVRVIGDTDQSITLAWKAPMAKNTTVFSVLYAVFGERDMRRINV
EPGKTKVTLYGLLPKTKYIVCVCVKGLIPRKEQCIIFSTDEVVSAGGTQKLINVVVISVA
CVIAVPLTLVVCCGALKRRCKKCFVRKPKDVQESYVTFESLSPGAKAKGVEGEYLTRHTP
DESNRLLSARSSVDSEAIPKIEGQPNEYFC
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgcggctggcggtgactctgctgtgctgctgggcgctggcggggctgccccgggccggc
ggctcctgcnnnnnnnnnncccctccgcgggcccgcggcgccttccacagcctcggcgac
gggaccaaggccaggacagtgctgtgtaatgacccagagatgaccctccctcctgtgaac
atccctgttgatacaagcaagcttcggatagaaaagacagccatccgcagggtgccagga
gaggctttccacctgctccacaacctggagtacctctggatgccctataactccctgggc
agcctcagcagcatcaccttcaagggccttcgtcgtctgcaggagctgaggctggctggg
aacaacctaatctcattcccctgggagagcctggctggcatgccccagctgaggctccta
gatttgcacaacaatgaactcacctcagtccctccagatgctgctcgttatgtcaagaac
atcacatacctggatctgtccagcaataagctgatgactcttcctcaggctctcattgcc
acctgggccaacctccaggctgttccctacttccccaatgataactccaagatcatccta
ggtttgcaagacaatccttgggtgtgtgactgcagtctgtacgaaatggtgcatttccta
aatttccagtctcctaacatagccttcattgagcccaggctgaaatgcttcacccccagg
agccttgcaggagtcttcttcagccaggtggagctgaggaagtgccagagccccgtggtg
cacacgtctgtagccaaggtgaagaccatcctgggcagcacggtgctgctgcgctgtggc
accacgggcgtgcccatccccgagctcagctggaggagagctgatggggctcagctgaat
ggcacagttcaccaagagatttccagtgatgggatgagctggtctatcctgggcctgcct
gtagtctcttaccttgactctggggagtacatctgtaaagcaaagaatttcctgggagca
acagaggccttcatctcgctcatcatcacagactcagaaagcacggatgaccctacctct
agtgccaaaggcacatggaatggcaaggccagcgggatggaggcagctgcctacaatgac
aaactggtggccaggtacgttatcaccacctccaccgtgcccacgctgggggctggggcg
ggcaccggagacagcgtcctcctcccggacatggctcaggacagcaacccccagaacctg
ctggtgagccccaccacgggccagcaggagccagagaggatggtgaggtctgtcagggtc
ataggggacaccgaccagagcatcaccctggcctggaaggcgcctatggcaaagaacacc
acggtgttcagtgtcctttatgccgtctttggggagagggacatgcggcggatcaatgtg
gagccagggaagaccaaggtcactctttacgggctgctgccaaagaccaaatacatcgtg
tgcgtctgtgtgaaagggctgatccccaggaaggagcagtgcatcatattttccacagac
gaagttgtcagtgcaggagggacgcagaagctcatcaacgtggttgtcatcagcgtggcc
tgtgtcattgctgttcctctgaccctggtggtctgctgcggagccctgaaacggcgctgc
aagaaatgctttgtgcgcaagcccaaggatgtgcaggaatcgtacgtcaccttcgaaagc
ctgtcccctggggccaaggccaagggcgtggagggagaatacctgaccaggcacacccct
gacgagtccaacaggctgctgtccgcccgctccagcgtggactcggaagccataccaaag
atagagggacagcctaatgaatacttctgctga
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