Geospiza fortis (medium ground-finch): 102044605
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Entry
102044605 CDS
T03755
Symbol
DDX49
Name
(RefSeq) DEAD-box helicase 49
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gfr03009
]
102044605 (DDX49)
Enzymes [BR:
gfr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102044605 (DDX49)
Ribosome biogenesis [BR:
gfr03009
]
Eukaryotic type
90S particles
Helicases
102044605 (DDX49)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
Rossmann-like
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
102044605
NCBI-ProteinID:
XP_014166785
LinkDB
All DBs
Position
Un
AA seq
316 aa
AA seq
DB search
MVSQALALARRPHVVVAVYMVSQALALARRPHVVVATPGRLADHLRSSSTFSLSKVQFLT
VQGLEQRYLLVPEALKDAYLVHLVQSFQDQHDDWAIIIFTKTCKDCQVLNMMLRKFSFPS
VALHSMMKQKQRFAALAKFKSSIFKILIATDVAARGLDIPAVQVVINHNTPGLPKIYIHR
VGRTARAGRKGMAITLVTQYDIHLVHAIEEEIKLQLPEFSVEEQLVLDILTQVNVTRREC
EIELEGMDFDEKKEINKRKQMILEGKDPEQEARRKAELSRLRSRNREGRQKLQQSLHRRR
QLQLRRKLHRRMERRK
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcgcaggcgctggccctggcccgcaggccgcacgtggtcgtggctgtgtacatg
gtgtcgcaggcgctggccctggcccgcaggccgcacgtggtcgtggccacccccgggcgc
ctcgctgaccacctgcgcagctccagcaccttcagcctcagcaaggtccagttcctgacc
gtgcaggggctggagcagaggtacctgctggtgcccgaggcgctcaaggacgcctacctg
gtgcacctggtgcagagcttccaggaccagcacgacgactgggccatcatcatcttcacc
aagacctgcaaggactgccaggtgctgaacatgatgctgaggaagttcagcttcccctca
gtggccctgcactccatgatgaagcagaaacagagatttgcagctttggccaagttcaag
tccagcatcttcaagatcctcattgccaccgatgtggctgccagaggtttggacatccca
gcagtgcaggttgtcatcaaccacaacacgccagggctgcccaagatctacatccaccgc
gtgggacgcacggcgcgggcagggaggaagggcatggccatcaccctggtgacgcagtac
gacatccacctggtgcacgccatcgaggaggagatcaagctgcagctgcccgagttctct
gtggaggagcagctggtgctggacatcctgacccaagtgaacgtcaccaggagggagtgt
gagatcgagctggaggggatggatttcgacgagaagaaggaaatcaataagaggaagcag
atgatcctggaagggaaggacccggagcaggaggcccgcaggaaggcggagctgtcccgg
ctgcggagcaggaacagggagggccgccagaagctgcagcagagcctgcacaggaggagg
cagctgcagctccgcaggaagctgcacaggaggatggagaggaggaag
DBGET
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