KEGG   Geospiza fortis (medium ground-finch): 102044664
Entry
102044664         CDS       T03755                                 
Symbol
USP39
Name
(RefSeq) ubiquitin specific peptidase 39
  KO
K12847  U4/U6.U5 tri-snRNP-associated protein 2
Organism
gfr  Geospiza fortis (medium ground-finch)
Pathway
gfr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gfr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102044664 (USP39)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gfr03041]
    102044664 (USP39)
Spliceosome [BR:gfr03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    102044664 (USP39)
SSDB
Motif
Pfam: UCH zf-UBP DUF2705
Other DBs
NCBI-GeneID: 102044664
NCBI-ProteinID: XP_014166548
LinkDB
Position
Un
AA seq 315 aa
MPGARCHGSARVPAGRGLKSHAYIHSVQLSHHVFLNLHTLKFYCLPDNYEIIDSSLEDIT
YVLKPTFTAQHITHLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQCPQPAEEKA
QLLQNSEYQERMVESTFLYLTLDLPTAPLYKDEKEQLIIPQVPLFSILAKFNGSTEKEYK
TYKENFLKRFQLTRLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLSEEVQAA
HSHTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQI
WKRREEDDTNQQQGA
NT seq 948 nt   +upstreamnt  +downstreamnt
atgcccggtgcccggtgccatggcagtgcccgtgtccccgcaggccgcgggctgaagtcg
cacgcctacatccacagcgtgcagctgagccaccacgtgttcctcaacctgcacacgctc
aagttctactgcctgcccgacaactacgagatcatcgactcctccctcgaggacatcacg
tacgtgctgaagcccacgttcacagcccagcacatcacccacctggacaagcaggccaag
ctgtcccgggcctacgatggcaccacgtacctgcccggcatcgtggggctcaacaacatc
aaggccaacgactacgccaacgctgtgctccagtgcccccagcccgccgaggagaaggcg
cagctcctgcagaacagcgagtaccaggagcgcatggtggagtccacgttcctgtacctg
accctggacctgcccacggcgccgctctacaaggacgagaaggagcagctgatcatcccc
caggtgcccctgttcagcatcctggccaagttcaacggcagcaccgagaaggagtacaag
acctacaaggagaacttcctgaagcgcttccagctgacgcgcctgccgccctacctcatc
ttctgcatcaagcgcttcaccaagaacaacttcttcgtggagaagaaccccaccatcgtc
aacttccccatcacgaacgtggacctgcgggagtacctgtcggaggaggtgcaggccgcg
cactcccacaccacctacgacctcatcgccaacatcgtgcacgacgggaagccctcggag
ggctcctaccgcatccacgtcctgcaccacggcacagggaagtggtacgagctgcaggac
ctgcaggtgaccgacatcctgccccagatgatcaccctgtccgaggcctacatccagatc
tggaagcgacgcgaggaggacgacacgaatcaacagcaaggcgcctga

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