Geospiza fortis (medium ground-finch): 102044678
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Entry
102044678 CDS
T03755
Symbol
NSD1
Name
(RefSeq) nuclear receptor binding SET domain protein 1
KO
K15588
[histone H3]-lysine36 N-dimethyltransferase NSD1 [EC:
2.1.1.357
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr00310
Lysine degradation
gfr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
102044678 (NSD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gfr03036
]
102044678 (NSD1)
Enzymes [BR:
gfr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.357 [histone H3]-lysine36 N-dimethyltransferase
102044678 (NSD1)
Chromosome and associated proteins [BR:
gfr03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
102044678 (NSD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SET
PWWP
C5HCH
AWS
PHD
Motif
Other DBs
NCBI-GeneID:
102044678
NCBI-ProteinID:
XP_014167684
LinkDB
All DBs
Position
Un
AA seq
2379 aa
AA seq
DB search
MKVSGGRPYREYYVDALGEPSEKTWVPGKAVVLFEGRHQFEELPVLRKRGKQKEKGYKHK
VPQRFRAKWEVSVGQAEDILLGGPEDQKCSQNSSEPDSEKDVQLEYYSNGPGAERDTQLN
GCLKSLAFDSRHVASEKGKLHIKPQVKTTSESRKRTRVKKSGARGEAPREESKDKTPESV
VRNVIVGDLPEKHASHELRRIANSLTAASSTRENHLLSSFGERRFEKTPLKPDYENRKSD
ALKSTLQGDLFSSPSFEREKSSLGILCSSKLQIHYSASDGGVEKKQTESDSSSSLSDGGN
SDVDTMDQSSERASSALEVSDSSDKVEKDFAMTSSGNIKLSMYLSQKSSRRARKKSHRDR
KALGGSVTNRLDAEFVDGELEVGLSDAEMSLTPLECSSDVRNYNLSLANKHPTPQSVSKE
GSWPAVTNQAILKAKSMKLPGSRSIKCKHKEKVAGLEPSLAEEEGAVNHCSSDTKGFSGL
SRDSLQRSGKVDGQKLLNNMHEKPRDSAEIETAVVKHVLSELKELSYRSMNDDASDSGTP
KATVPLLFSSASGHGRLPIEPDYKFSTLLMMLKDMHDSKTKEQQLMTGQNIVPFRNTSTG
DGSGSNSASGLKSLSIVGPPYKIEKNGDCVQETVTPNSAISNSSFSRGPPTKLTGIGTGK
REPASAAVSGTNGTNCMSKRNCSKSKQSSKLGDKTVSNRKDLKPGGPTHSERKRLRKPSK
RLLEYAEEYDHLFAPKKKSKKGQEQSQKVNSVARSECEGGVPAQCSPDRETQRGPSSLVS
TPSSTKESPPVLEAECSFSELGSHSTDPPSQAQGGSSDFPEVVVLSSSDVSEVSASPDAE
EGFLKSGNFESKRQRKPTKKLLESNDLDTAFMPKKEEWTPQKKGTGPSESDSSELYSPGH
FQDTGEASEKLLEKQRKRKRQRHTSAAVHSKKEKNEEGLGETPHSEGETSVHGTAASPKE
GHEEGSENDHGVPSSKKIQGERGGGAALKENVCQICEKPGELLLCEAQCCGAFHLQCLGL
SEMPKGKFICNECSTGVHTCFVCKSCGEDVKRCLLPLCGKYYHEACIQKYPPTVMQNKGF
RCSLHICMTCHAANPANISASKGRLMRCVRCPVAYHSNDFCLAAGSVVLASNSIICPNHF
TARRGCRNHEHVNVSWCFVCSEGGSLLCCESCPAAFHRECLNIEMPEGSWYCNDCKAGKK
PHYKEVVWVKVGRYRWWPAEICHPRTIPVNIQKMKHDIGEFPVLFFGSKDYLWTHQARVF
PYMEGDVSSKDKMGKGVDGIYKKALQEAAVRFEELKAQKELRQLQEDKKNDKKPPPYKHI
KVNRPVGKVQIFTADLSEIPRCNCKPTDENPCGLDSECINRMLLYECHPLVCPAGERCQN
QCFSKRQYPEVQIFRTLARGWGLQAKTDIRKGEFVNEYVGELIDEEECRARIRYAQEHDI
TNFYMLTLDKDRIIDAGPKGNYARFMNHCCQPNCETQKWCVNGDTRVGLFALVNIKAGTE
LTFNYNLECLGNGKTVCKCGAPNCSGFLGVRPKSQPSLSEEKSKKLKRRPQMKRRSQAEV
MKEREDECFSCGDGGQLVSCKKSGCPKVYHADCLNLTKRPAGKWECPWHQCDVCGKEAAS
FCEMCPRSFCKQHREGMLFISKLDGRLCCTEHDPCGPHPLEPGEIREYAPPIEGLTNGED
TQPPEQVPAETEADTDLSVQPLDSLPQSVALRLQSPEKPPATLALRLPSSDKPPTTLALR
LQPSNKPPTTLALRLPSPDKPPATLALRLPPSNKPPATLSLRLKPSNKPSTTLSLRLQPS
DKPPTTLSLRLQPSDKPQAALSLRLQSEKQPIIVALRPQQPDKPPSNAVLWPLDESSSDA
SQPQLPSKSPPGSPQSPLDESLVTAADLQLQLADETPDAPEVLELSDKSLIDSRAQQPEL
LDEFPVKCLPPPLSDRLLATVGMLQSQAGDEPSEADQLQSLDDSFAQSPQPQAVQEASSS
GVPQVPELEMASSPEVLWSVSVEKVPDSPVSRILPSEKAPGSAVPQSPPLEKASFSGAVR
VPDTEKSPSSGSPCPLPPEKAADSGVPQILPTEKAPSSGLPWPLSLEKAAGSRSPHVLPT
ERGLSSGALQIPLTQKSVSPGVLRPLPAEKAADSGALRVPPLEKALSSGVSRPQLLERPL
TLTAPWPQASDKLAPAVAPRXXXXAASAPRLLLSEKALRPVDQNAQLKERGAPAVELSPQ
QKERTMLAGEQISWSAGKVVTQVGQVPWPTEKLQTHEQSHWSTTKTLTPAEQPSRTAEKL
PEPTLQPSWEVASAPSEQSPWTSERLCAFEQTPRPAREAPVPPEQMQWLVTNVQTIDQIA
WLSGKAQTPRGQDPLPEQNTALACNQDSVCHELADSEPK
NT seq
7140 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtttccggtgggagaccataccgagagtattatgtggatgccttaggagaacct
tcagagaaaacctgggttcctgggaaagctgttgtcctctttgaagggagacatcagttt
gaagagctgcctgttctccggaaaagaggaaagcagaaggaaaaaggatacaaacacaag
gttcctcagagatttagggctaaatgggaagtcagtgttggacaggcagaagacattctt
ctcggggggccagaggatcagaagtgcagccagaactcgagcgagccggacagcgagaag
gacgtgcagctggaatactacagcaatggccctggagcagaaagggacacgcaactgaac
ggctgcttaaaatccttggcttttgactccagacacgtggccagtgaaaaaggaaaattg
cacatcaagccacaggtgaaaacaacctctgaaagcagaaaaaggactagagtaaaaaag
agtggcgcaagaggggaagcaccgagggaagaaagcaaagacaaaacaccagagagcgta
gttagaaacgtgattgttggggacctgccagagaaacatgcgtctcacgagcttcgcagg
attgccaacagcctgacagcagccagtagcaccagggaaaaccatttgctgtcctccttt
ggagaaagacgctttgaaaagactcctctaaaaccagactatgagaatcgtaaaagtgac
gctctgaaaagcaccctccaaggagatttgttttccagcccgtcttttgagagagagaag
agctccctgggcattttgtgcagttccaagttacaaatacactattctgcatctgatggt
ggtgttgagaaaaaacaaactgaatcagattcatcctcttccctttctgatggtgggaac
agtgatgtagataccatggaccaaagttcagagagagcctctagtgctcttgaagttagt
gattcttcagataaagtggagaaggactttgctatgacatcaagtggaaacattaaactt
tccatgtatctttctcagaagagcagcagaagggccaggaagaagtcgcacagagatcgc
aaagctctgggaggttcagtaaccaacagacttgatgctgaatttgtggatggggagctt
gaagtaggtttgtctgatgctgagatgtcattgacacctctcgagtgctcttcagatgtg
agaaattacaatctgtccctagcaaataagcaccctaccccccaaagtgtttccaaggag
ggctcctggcctgctgttacaaatcaagcaatcttgaaagcaaaaagcatgaaattacct
ggaagcagaagtataaaatgtaaacataaagaaaaggttgctgggttggagccttctctt
gcagaagaggagggtgctgtgaatcactgttcttcagataccaaaggtttctctggcctt
tcaagagattctcttcagagaagtggaaaagttgatggtcagaaactgttaaacaacatg
catgagaaacccagggattctgctgaaatcgaaacagccgtggtgaagcacgttctgtca
gagctgaaggaactgtcctatcggtccatgaatgatgatgccagtgactctggcactcca
aaggccacagtacctttgcttttctcctctgcttctggtcatggtcgtttgcccattgaa
ccagattacaaattcagcaccttgttaatgatgttgaaggatatgcatgacagtaagaca
aaagagcagcaactgatgactggtcaaaatatagtcccatttcgaaataccagcacaggt
gatggttctggaagcaattctgcaagtggtctcaagtctttgtctattgtaggtccccca
tataaaatagaaaaaaatggagattgtgtccaggaaaccgtaactccaaactctgctata
agcaactcctcattttcacgtggtcctccaaccaagttgacagggattggtactggtaaa
agggagcctgcgagtgctgctgtttctgggacaaacggcacaaattgcatgtccaaacgc
aactgttcaaaatctaagcagtcatcaaagcttggagataaaacagtttcaaacagaaag
gacttaaaaccaggagggccaacacattcagagaggaaacgccttagaaagccaagtaaa
cggcttctggaatatgcagaagaatatgatcacttgtttgcacccaagaaaaaatcaaag
aagggccaggagcaatcacaaaaggtgaattctgtggcgaggtctgaatgtgaaggaggc
gttcctgcacaatgcagtcctgacagagagacccagcgggggccaagttctttggtttca
actccatcttcaaccaaagagtcccctcccgtccttgaagcagagtgttccttctcagaa
ctaggatcccactccactgatccccctagtcaagctcaaggaggatcttcagattttcca
gaggtggtggttctgtcttcctcggatgtttctgaagtttctgcttctccagatgcagaa
gagggattcctgaaatcaggaaacttcgaaagcaagcgtcaaaggaagcccactaaaaag
ctcttggaatccaatgacttggacactgcctttatgccaaagaaggaggaatggactccc
caaaagaagggtactggcccttcagagagtgacagctctgagctctactcaccaggccac
ttccaggacacgggagaagcttctgaaaagctcttggagaagcagcgaaagcggaagagg
cagcgccacacctctgctgcagtccattccaagaaggagaaaaatgaggaggggctgggg
gagaccccacactctgagggggaaacatcggttcatgggactgctgcaagccccaaagag
ggtcatgaggaggggtcagagaatgaccatggagtgccttcgtccaaaaagatacagggg
gagcgtggaggaggagcagctctcaaggagaatgtgtgtcagatctgtgagaagccaggg
gagttgttgctgtgtgaggcgcagtgctgtggtgctttccacctgcagtgccttgggctc
tccgagatgccaaagggcaaattcatctgcaatgagtgttccacaggggtccacacctgc
tttgtgtgcaagagctgcggggaggatgtgaagcggtgcttgctgcccctctgtgggaag
tattaccacgaagcctgcatccagaaatacccgcccacagtcatgcagaacaagggcttc
cgctgctccctgcacatctgcatgacctgccatgctgctaacccagcaaacatctctgcc
tctaaaggtcgcctgatgcgctgcgtgcggtgtccggtcgcgtatcactccaacgacttc
tgcctggccgccggctccgtggtcctggcctccaacagcatcatctgccccaaccacttc
actgcccgccggggctgccgcaaccacgagcacgtcaacgtcagctggtgctttgtctgc
tcggaagggggcagccttttatgctgcgagtcgtgcccggctgcgtttcaccgtgagtgt
ctaaacattgagatgccagagggaagctggtattgtaatgattgcaaggcaggcaaaaag
ccacactacaaagaagtagtctgggtgaaagttgggcgctacaggtggtggccagctgag
atttgccatcctaggacaattcctgtcaacatccaaaaaatgaaacatgacattggcgag
ttccctgtgctgttctttggctccaaggactacctgtggacccaccaggctcgtgtgttc
ccttacatggaaggtgatgtcagcagcaaagacaagatggggaaaggcgtggatggcatt
tacaaaaaagctcttcaggaagctgctgtgagatttgaagaattgaaagcacagaaagaa
ctgagacaacttcaggaagacaaaaagaatgacaagaaacctcctccctacaaacacatc
aaggtgaaccggcccgtggggaaggtgcagatcttcactgcagacctgtccgagatcccg
cgctgcaactgcaaacccacggacgagaacccctgcggcctggactcggagtgcatcaac
cgcatgctgctctacgagtgccaccccctggtgtgccctgcgggggagcgctgccagaac
cagtgcttctccaagcgccagtaccccgaggtgcagatcttccgcacgctggcacgaggc
tggggcctgcaggccaaaacagacatcaggaagggtgaatttgttaatgagtatgttggg
gagctaattgatgaggaggagtgccgagcccgaatccgctatgctcaggagcacgacatc
accaatttctacatgctgacactggataaggatcgaatcattgatgctgggccaaagggt
aactatgctcggttcatgaaccactgctgccagcccaactgtgagactcagaaatggtgt
gtgaatggtgacactcgggtcgggctcttcgcacttgtaaatatcaaagctgggactgag
ctgactttcaactacaatctggagtgtttgggaaatggaaagaccgtttgtaaatgtggt
gccccaaactgcagtggcttcctaggagtaaggccgaagagccagcccagcctgagcgaa
gagaagtccaagaagctcaagaggcggccgcagatgaagcgcaggtcgcaggcggaggtg
atgaaggagcgggaggacgagtgcttcagctgtggggatggaggccagctggtctcctgt
aagaagtcaggctgccccaaggtgtaccatgctgactgcctcaacctgaccaagagacct
gcaggaaagtgggagtgcccgtggcatcagtgtgacgtgtgtggcaaggaagcagcttcg
ttctgcgagatgtgccccaggtccttctgcaagcagcaccgggaaggaatgctcttcatc
tccaagctggatggacgattatgctgcacagagcatgatccctgtgggcctcaccctcta
gagccaggagaaattcgtgagtatgcacctcccatagaaggcctgactaacggcgaggac
acccagccgccagagcaggtgcctgcagaaacagaggcagacacagacctgagtgttcag
cccctggacagcctacctcagtctgtggccctcagactgcagtcaccagaaaagccccct
gctaccctagctctgaggctgccttcttcagacaagccccccaccacccttgccctgagg
ttgcagccatcaaacaagccccccaccaccctggccctcaggctaccttcaccagacaaa
ccacctgccaccctggctctgagactgccaccgtcaaataaaccccccgccactctgtca
ctgaggctgaagccatccaacaaaccctccaccaccctgtcactacggcttcagccttcg
gacaaacctcccaccaccctgtcgctccgcctgcagccatcagacaagccccaggctgcc
ctgtccctgaggctgcagtcagagaagcagcccatcatcgtagcgctgcggcctcagcag
cccgacaaacctcccagcaacgcggtgctctggccgctggacgagtcctccagtgacgcc
tcgcagcctcagctgccgagcaaatctcctccaggatcacctcagtccccgctggatgag
tcacttgtcactgctgctgacctgcagctccagctggcagatgagactcctgatgccccc
gaggttttggagttatcggacaagtccctcattgacagcagggcgcagcagcccgagctg
ctggatgagttccctgtgaaatgcctgcctcctccactgtctgacagactcctggccacc
gtggggatgctgcagtcccaggcaggggatgagccctctgaggccgatcagctccagtcc
ctggacgactcctttgcacagagtccgcagccacaggctgtgcaagaggcttccagctct
ggggtgccgcaggtcccagaattggagatggcttccagtcctgaggtgctgtggtctgtt
tctgttgaaaaagtcccagactccccagtctcacggatcctgccctcagagaaggctcct
ggatcagcagtaccacaatccccacctctagaaaaggcttccttctctggggcagtgcgg
gtcccagacacagagaagtctcccagctctgggtcaccctgtcccctgcctccagagaag
gctgctgattcgggtgtgcctcagatcctgcccacagagaaggctcccagctcagggttg
ccatggcccctgtctctggagaaggctgctggctcccggtcaccgcacgtcctgcccacg
gagaggggcctcagctcaggggcccttcagatcccgctcacacagaagtctgtctccccc
ggggtgctgcgaccccttcctgcagagaaggccgctgactccggggccctgcgggttcct
cctttggaaaaggctctcagctctggggtgtctcggcctcagctcttggagaggcctctc
actcttacagccccgtggcctcaggcatcagataagctggctcctgctgtggctccccgg
nnnnnnnnnntggctgcatcagctccgaggctgttgctgtcggagaaggcgctgcgtccc
gtcgaccagaacgctcagctgaaggagagaggagccccagccgtggagctgagtccccag
cagaaagagaggaccatgttagctggggagcaaatctcttggtctgctgggaaggtggtg
acacaggttggacaagtaccttggcctacagagaaactacagacgcacgagcaaagccac
tggtccaccacgaaaacgctgacacctgcggagcagccttcccggacagcagagaaacta
ccagagccaacccttcagcccagctgggaagtggcctcagccccctcggagcagagcccg
tggacatcagagagattgtgtgcattcgagcagacccctcggccagccagggaagcaccg
gtgcccccggagcagatgcagtggcttgtcacgaacgttcagacaattgatcagattgct
tggctgagtggaaaagcacagactcctcgggggcaggaccctttgcctgaacaaaacaca
gcgctagcctgtaaccaggattctgtctgtcatgagttggctgactcagagccaaagtga
DBGET
integrated database retrieval system
