KEGG   Geospiza fortis (medium ground-finch): 102044743
Entry
102044743         CDS       T03755                                 
Symbol
USP30
Name
(RefSeq) ubiquitin specific peptidase 30
  KO
K11851  ubiquitin carboxyl-terminal hydrolase 30 [EC:3.4.19.12]
Organism
gfr  Geospiza fortis (medium ground-finch)
Pathway
gfr04137  Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:gfr00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    102044743 (USP30)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:gfr01002]
    102044743 (USP30)
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gfr04131]
    102044743 (USP30)
   04121 Ubiquitin system [BR:gfr04121]
    102044743 (USP30)
Enzymes [BR:gfr01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     102044743 (USP30)
Peptidases and inhibitors [BR:gfr01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   102044743 (USP30)
Membrane trafficking [BR:gfr04131]
 Autophagy
  Mitophagy
   Other mitophagy associated  proteins
    102044743 (USP30)
Ubiquitin system [BR:gfr04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    102044743 (USP30)
SSDB
Motif
Pfam: UCH UCH_1 DUF5700
Other DBs
NCBI-GeneID: 102044743
NCBI-ProteinID: XP_014163720
UniProt: A0A6I9Z9Q3
LinkDB
Position
Un
AA seq 445 aa
MNSLLQGLSSCPSFIRWLEEFTAQYRTEQEQPQEQPQHLSVTLLQLLRALSCQEVPEDDV
LDASCLLEVLRMNRWQISSFEEQDAHELFHVLTSSLEDERDRQPRVTHLFDVHSLEQPEI
IQKQISCRTRGCLPPVSNHWKSQHPFHGRLSSNMVCKHCEHQSPVRFDTFDSLSLSIPAA
VWGRPMTLDHCLHHFISSESVKDVVCDNCTKIQAQGILNGQSIENQRTTFVKQLKLGKLP
QCLCIHLQRLSWSNQGTPLKRHEHVQFNEFLVMDIYKYRVPGPKSCQEQLSQKNPEETTP
GIKDGRAGKPSDAEQPAGTKPLFMNGASSSSSSSPSFLMSPGTFPLAAFPECRAPLYLYR
LMAVVVHHGDMHSGHFVTFRRAPVSDESVRRASLHEVLAASAYLLFYERVHGRGQPQSPA
QRVIPNFVMWGALGGGDGKLLLAVI
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgaattccctgctgcagggcttgtcctcctgcccctcgttcatcaggtggctggaggag
ttcacagcccagtacaggacggagcaggagcagccccaggagcagccccagcacctctca
gtgactctgctgcagctcctcagagctctgtcgtgccaggaggtgccagaggacgacgtc
ctggatgccagctgcctgctggaggtgctcaggatgaacaggtggcagatctcctccttt
gaggagcaggatgcccatgagctgttccatgtcctgacctcttccctggaggacgagcgg
gatcggcagccccgtgtgacccatctgtttgatgtgcattccctggagcaaccagaaata
atccaaaagcaaataagctgcagaacaagaggatgtcttccccctgtgtccaaccactgg
aaatctcagcaccctttccatggaaggctgtccagcaacatggtgtgcaaacactgtgag
caccagagccctgtgaggtttgacacctttgacagcctctccctgagcattccagcagct
gtgtggggtcgtcccatgacactggaccattgcctccatcacttcatctcctcagagtct
gtcaaggatgttgtgtgtgacaactgcaccaaaatccaggcacaaggaattctgaatgga
cagagcatagaaaaccagagaacaacatttgttaagcaattaaagttaggaaagctgccc
cagtgtttgtgcatccacctgcaaaggctgagctggtcaaaccaaggcactcccctgaag
agacacgaacacgtccagttcaacgagttcctggtcatggacatctacaaatatcgagtt
cctggtcccaaatcctgccaggagcagctcagccagaaaaacccggaggagacaacccct
ggaataaaggatgggagagcagggaaaccttcagatgcagaacagccagctggtaccaaa
cctctcttcatgaatggtgcctcctcttcctcctcctcctctccctcatttttaatgtcc
ccaggaactttcccacttgctgcattccctgagtgcagggccccgctgtacctgtaccgc
ctgatggccgtggtggttcaccacggggacatgcactcgggacacttcgtcaccttccgg
cgcgcgccggtctcggacgagtcggtgcgcagggccagcctgcacgaggtgctggcagcc
agcgcctacctgctgttctacgagcgtgtgcacggccggggccagccccagagcccggcc
cagagggtcatcccaaactttgtgatgtggggagccctgggagggggcgatgggaagctg
ctgttggccgtgatttga

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