Geospiza fortis (medium ground-finch): 102044746 Help Entry 102044746         CDS       T03755                                  Symbol COL4A4 Name (RefSeq) collagen type IV alpha 4 chain   KO K06237   collagen type IV alpha Organism gfr  Geospiza fortis (medium ground-finch) Pathway gfr04382   Cornified envelope formation gfr04510   Focal adhesion gfr04512   ECM-receptor interaction gfr04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:gfr00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     102044746 (COL4A4)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     102044746 (COL4A4)   09142 Cell motility    04820 Cytoskeleton in muscle cells     102044746 (COL4A4)  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     102044746 (COL4A4)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:gfr04147]     102044746 (COL4A4)    00536 Glycosaminoglycan binding proteins [BR:gfr00536]     102044746 (COL4A4) Exosome [BR:gfr04147]  Exosomal proteins   Exosomal proteins of other cancer cells    102044746 (COL4A4) Glycosaminoglycan binding proteins [BR:gfr00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    102044746 (COL4A4) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  102044746 NCBI-ProteinID:  XP_014163971 LinkDB All DBs Position Un AA seq 1679 aa AA seqDB search MDSFEWIKWLITAAWWLLIVFSSQGIDGGGYAYIDPCGGQDCSVCRCFPEKGSRGQPGEL GAQGPIGSLGSTGPAGLPGEKGQRGENGKPGPAGEKGDKGPTGVPGFPGLDGVPGLPGRE GPRGKHGLDGCNGSRGDPGFPGENGYMGPRGPYGIPGQKGEKGNSVYILHFGKGLPGERG DPGPPGLPGPRGSRGTTGPSGYPGHPGLPGVPGYPGLPGEQGNPGIGVDGQKGEPGDIGL PGPPGSPLLVGPPGAQLFKGQKGQKGLPGVTGYRGPRGPKGILGGGEKGEKGLPGFPGLR GHPGSYGPAGSPGMKGETGFAGFPGQPGYPGIQGDPGEKGPPGPPGAVGTPLLPIKGPRG DPGFPGPVGEMGSVGPIGPSGLLGRPGYDGTSLPGLPGVRGAPGPQGFQGDPGLPGTGEL IPGRPGFPGPPGLPGQPGRQGLPGLPSVICTDRGIPGEPGPKGQIGLPGRKGAKGEKGNQ GLCSCDAGPPGARGVQGPPGTPGRKGQMGSPGRHGEKGDPGLSGAVGSPGLPGTPGSAGQ HGEKGEKGDPGRVRIKGLKGERGPTGLPGFPGQRGLDGRDGELGLPGEKGAEGDSGVAIP GDKGFPGLPGPPGVKGQMGLPGLGLPGSPGARGSPGDSGDMGNVGPPGPKGQKGETVCIT SPYPGNPGPPGFKGVQGQKGLKGLPGHPGPNGFDGQKGHRGRPGAGIPGPEGFRGTAGDP GDEGERGSTIDGKNGLPGPPGKDGQKGLPGDTTYGPPGIPGTRGLPGPPGAQGARGNPGI TGLQGMRQPGTPGFPGAKGFRGPEGDVGAPGCPGFPGSPCVPGLPGPPGLRGVMGLPGPQ GLPGFKGQRGDRGLAGPPGIKGLKGSLGSRGLPGPPGSRGPPGLPGNRGPVGFPGETGSK GIQGPQGFPGLPGIQGPMGILGVKGEEGKMGLPGPSGECGDMGIKGERGPPGDSGCVNLR LEKGQRGDPGFPGEHGLRGDRGEKGNTGLRGTRGFPGKNGVPGLPGDQGDTGVMGFPGSR GLPGPKGLQGMTGFQGEPGDQGDVGLPGNPGYPGLTGSKGCKGKRGDPTPLLGTQGQKGP LGDPGLPGLRGFPGEKGLPGIQGQPGRPGSKGDPGYPGPPGLPGARGPQGLPGEPGEKGK PGILGPPGLQGLPGSQGRKGLPGLPGLPGLDGLKGQKGSAGAPGQSETGPPGYSGEIGPK GDRGEPGWPGISIPGPPGERGFPGFPGKRGPVGPTGPMGRSPDSASPGPPGDQGLPGLDG IRGDPGNPGPPGETIFVRGDPGDSGVQGAPGNPGPRGQQGARGPPGSQGREGPKGPTGIH GPQGPPGALGQPGDQGFPGRPGPRGPTGFIGDPGEPGKVDDSCPTIPGPPGEAGQRGEDG SVGLPGPIGHPGPQGIKGEEGSYGLPGQDGLPGAPGPPGDQGSRGEQGYAGPRGPPGQTG VPGQPGPQIRSASGFLLVLHSQSDREPLCPQGMPKLWAGYSLLYLEGQEKAHNQDLGLAG SCLPVFSTMPFAYCNINQVCYYASRNDKSYWLASAAPLPTAPLSEEEIQPYISRCAVCEA PAQAVALHSQDQSIPPCPPNWRSLWIGYSFLMHTGSGDQGGGQSLMSPGSCLEDFRSAPF IECQGQRGTCQFFANEYSFWLTTVVPELQFASAPLSGTLKEGQEQRKKISRCQVCLKHG NT seq 5040 nt NT seq  +upstreamnt  +downstreamnt atggattcatttgaatggattaagtggcttatcacagctgcctggtggctgctgattgtt ttttcaagtcaaggaattgatgggggaggatatgcatatattgatccatgtgggggacag gattgttcagtttgtcggtgctttccagaaaaaggatcaaggggtcagcctggtgagctg ggagctcaaggtccgattgggtccttgggatctacaggaccagctggtctgccaggggaa aaaggacagagaggtgagaatgggaagcctgggccagctggagaaaaaggtgataagggc ccaaccggagtcccaggatttcctggtttagatggtgttcctggcctcccaggaagggaa ggacccagaggcaagcatggtttggacggctgcaatggctcgagaggagacccaggattc ccaggagaaaacggttatatgggaccaagaggtccttatggaattccagggcaaaaagga gaaaaaggaaattcagtgtatattttacattttggaaaaggacttccgggggagagaggt gatcctggaccccctggcctgcctggaccaagggggtcaagaggtacaacgggcccatct ggatacccaggccatccaggcttgcctggtgttccaggttaccctggtttgccaggtgaa cagggaaatccagggattggagtggatggacaaaagggggagccgggtgacattggactc cctgggccacctgggtcaccgctgttagttggacctcctggagctcagctgttcaaaggc caaaagggccaaaaaggattacctggggtaacaggatacagagggccacgtggacccaaa ggcatacttgggggaggagaaaaaggtgaaaaaggccttcctggatttcctggattgcgg ggtcatcctggttcttatggacctgcaggttctcctggaatgaagggcgaaacaggattt gctggttttcctggacaacctggctatccaggcattcagggggatccaggagaaaaaggg cccccaggtcctcctggagctgttggaactccactgcttcctataaaaggtccacgagga gatcctggatttccaggtcctgttggtgaaatggggtcagttggaccaattggtccttca ggccttctaggaagaccaggatatgatggaacaagtcttcctggcctgccaggagtaaga ggggcaccaggacctcaaggctttcaaggggaccctggtttgcctggaacaggtgaatta atcccaggaagaccgggatttcctggaccaccaggcctgccagggcagccaggaagacaa ggcttacctggactacccagtgtaatctgtacagacagagggatccctggagaacctgga ccaaaaggtcagattggccttccaggaagaaaaggggcaaaaggagagaagggtaatcaa ggcctctgctcatgtgatgctggtcctcctggtgcccgtggtgtgcaaggacctccaggt actccaggaaggaaaggacaaatgggatcccctggaagacacggagaaaagggcgaccca ggcttatctggtgcagtgggatcaccagggctccctgggactcctggttctgctggacag catggagaaaaaggagagaagggtgatccaggaagagttagaataaaaggattaaaaggt gaaagaggacctactgggcttccaggatttccaggccaaagaggtcttgatggcagagat ggggaactaggattgccaggggaaaaaggagctgagggcgactctggagtagcaattccg ggtgataaaggattccctgggctcccgggacctcctggggtaaaaggccagatgggattg cccggtttggggcttcctgggtctccaggagccagaggtagccctggagactctggtgac atgggtaatgttgggccacctggtccaaaaggccagaaaggtgaaactgtctgcattaca tcaccatatcctggaaatccaggtcccccgggttttaaaggtgttcaaggacaaaaaggt ttaaaaggactccctgggcatcctggaccaaatggctttgatgggcaaaaaggccatcga ggaaggccaggagcaggaatccctgggccagaaggctttcgaggcacggctggtgatcct ggtgatgaaggtgaaagaggatctacaattgatggcaaaaatggccttccaggtccccct ggcaaagatggtcagaaaggtcttccaggtgacaccacatatggccctccaggaatccca ggcaccaggggactgccaggaccccctggtgcacagggagcaaggggaaatccgggcatt actggacttcaaggaatgagacaacctggtaccccaggatttccaggtgccaaaggtttt agaggcccagaaggtgatgtaggagcaccaggctgcccaggcttccctggctcaccatgt gtcccaggcttaccaggaccacctggactcagaggtgtcatgggcctgccaggacctcaa ggcttaccaggttttaaaggtcagaggggagacaggggcctggctgggccccctggaatc aaaggtctcaaaggctctctgggctcacgaggtctcccaggtcctccaggctcacgaggt cccccaggacttccaggaaatagaggacctgttggcttcccaggagaaacaggaagcaaa ggcattcaaggaccccagggattcccaggactcccaggaatacaaggcccaatgggaatc cttggtgtaaaaggtgaagaaggaaaaatgggtctacctgggcctagtggagaatgtgga gatatgggaataaaaggtgagagggggcctccaggagacagcggctgcgttaacctccgt ctggagaagggccaaaggggggacccagggtttcctggggagcatggactgagaggtgac agaggtgaaaaaggcaatactggtttgagaggcacacgaggatttccaggaaagaatggt gttccaggactaccaggtgatcaaggtgacactggagtgatggggtttccaggatcacgg ggtttgcctggaccaaagggccttcaaggaatgacaggttttcaaggagaaccgggtgac cagggtgatgttggcttaccaggaaaccctggatatccaggactgactggctccaaagga tgtaaaggcaagagaggtgacccaactcctctgcttggtacacaaggtcagaaagggcct ctgggagatccaggattgccaggacttcgtggatttccaggggagaagggtttaccaggt atccaaggacagcctggaagaccaggctccaagggtgaccctggatatccagggccacct ggattaccaggagcgagaggtcctcaaggattgccaggagaacctggagaaaaagggaaa cctggaattttgggacctccaggattgcaagggttacctggatcccaaggcagaaaaggt cttcctggactgcctggactgcctggactggatggactaaaaggtcaaaagggttctgca ggagctccaggtcagagtgagacagggcccccaggatactcaggagaaattggaccaaaa ggagacagaggtgaacctggatggcctggtatttctattccagggccccctggagaaagg ggattcccaggatttccaggtaaaagaggacctgttggacccactggacctatgggaaga tctcctgatagtgcctcccctggtcctccaggcgatcaaggattacctggtttagacggc atcagaggtgatcctgggaatcctggtcctcctggagagacgatctttgtgcgaggagat ccaggtgatagtggtgttcaaggggcaccaggtaatcctgggccacgaggacagcaggga gccagaggccctccagggagccaaggaagagaaggcccaaagggtcctacgggcatccat ggcccacagggtccacctggtgctttaggacaaccaggagaccaaggttttccaggaaga cctggtcccagaggtcccacaggtttcataggtgaccctggtgagccagggaaagtggat gattcatgccctacaatcccagggcctcctggggaagcaggccaaagaggagaggatggc tctgtaggattaccagggccaataggccaccctggaccccaaggcataaaaggtgaagaa ggatcatatggcctgccaggtcaagatgggttacctggggcacctggaccaccaggggac caagggagccgaggagagcaaggatatgctgggccacgaggtccacctggccagactggt gtcccaggacaaccaggcccccaaattagatctgcaagtggattcttgctcgtccttcac agtcagtcagacagagaaccactctgcccacaggggatgccaaagttatgggctggctat agtctgctgtacctggagggacaagaaaaagcccataatcaagatcttggtctggcaggg tcctgcctgcctgtgtttagtaccatgccctttgcctactgcaacatcaaccaggtgtgt tactatgccagccgcaatgacaagtcctactggctggccagcgcggccccgctgcccacg gcgccgctgtctgaggaggagatccagccctacatcagcagatgtgctgtgtgtgaggcc cctgcacaggctgtggcactgcacagccaggaccagtccattcccccctgcccacccaac tggaggagcctttggataggatactcatttttgatgcacactggatctggtgaccagggt ggtggacagtcccttatgtcacccggaagctgcctggaagacttcagatcagcaccattc atcgagtgccagggccagcggggaacgtgtcagttcttcgctaatgaatacagtttctgg ctgaccaccgtggtgcctgagctgcagtttgcttcagcccccctgtcagggactcttaaa gaaggacaagagcagaggaagaaaatcagtagatgccaggtatgcctgaagcatggctaa

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