Geospiza fortis (medium ground-finch): 102044746 Help Entry 102044746         CDS       T03755                                  Symbol COL4A4 Name (RefSeq) collagen type IV alpha 4 chain   KO K06237   collagen type IV alpha Organism gfr  Geospiza fortis (medium ground-finch) Pathway gfr04510   Focal adhesion gfr04512   ECM-receptor interaction gfr04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:gfr00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     102044746 (COL4A4)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     102044746 (COL4A4)   09142 Cell motility    04820 Cytoskeleton in muscle cells     102044746 (COL4A4)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:gfr04147]     102044746 (COL4A4)    00536 Glycosaminoglycan binding proteins [BR:gfr00536]     102044746 (COL4A4) Exosome [BR:gfr04147]  Exosomal proteins   Exosomal proteins of other cancer cells    102044746 (COL4A4) Glycosaminoglycan binding proteins [BR:gfr00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    102044746 (COL4A4) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  102044746 NCBI-ProteinID:  XP_014163971 LinkDB All DBs Position Un AA seq 1679 aa AA seqDB search MDSFEWIKWLITAAWWLLIVFSSQGIDGGGYAYIDPCGGQDCSVCRCFPEKGSRGQPGEL GAQGPIGSLGSTGPAGLPGEKGQRGENGKPGPAGEKGDKGPTGVPGFPGLDGVPGLPGRE GPRGKHGLDGCNGSRGDPGFPGENGYMGPRGPYGIPGQKGEKGNSVYILHFGKGLPGERG DPGPPGLPGPRGSRGTTGPSGYPGHPGLPGVPGYPGLPGEQGNPGIGVDGQKGEPGDIGL PGPPGSPLLVGPPGAQLFKGQKGQKGLPGVTGYRGPRGPKGILGGGEKGEKGLPGFPGLR GHPGSYGPAGSPGMKGETGFAGFPGQPGYPGIQGDPGEKGPPGPPGAVGTPLLPIKGPRG DPGFPGPVGEMGSVGPIGPSGLLGRPGYDGTSLPGLPGVRGAPGPQGFQGDPGLPGTGEL IPGRPGFPGPPGLPGQPGRQGLPGLPSVICTDRGIPGEPGPKGQIGLPGRKGAKGEKGNQ GLCSCDAGPPGARGVQGPPGTPGRKGQMGSPGRHGEKGDPGLSGAVGSPGLPGTPGSAGQ HGEKGEKGDPGRVRIKGLKGERGPTGLPGFPGQRGLDGRDGELGLPGEKGAEGDSGVAIP GDKGFPGLPGPPGVKGQMGLPGLGLPGSPGARGSPGDSGDMGNVGPPGPKGQKGETVCIT SPYPGNPGPPGFKGVQGQKGLKGLPGHPGPNGFDGQKGHRGRPGAGIPGPEGFRGTAGDP GDEGERGSTIDGKNGLPGPPGKDGQKGLPGDTTYGPPGIPGTRGLPGPPGAQGARGNPGI TGLQGMRQPGTPGFPGAKGFRGPEGDVGAPGCPGFPGSPCVPGLPGPPGLRGVMGLPGPQ GLPGFKGQRGDRGLAGPPGIKGLKGSLGSRGLPGPPGSRGPPGLPGNRGPVGFPGETGSK GIQGPQGFPGLPGIQGPMGILGVKGEEGKMGLPGPSGECGDMGIKGERGPPGDSGCVNLR LEKGQRGDPGFPGEHGLRGDRGEKGNTGLRGTRGFPGKNGVPGLPGDQGDTGVMGFPGSR GLPGPKGLQGMTGFQGEPGDQGDVGLPGNPGYPGLTGSKGCKGKRGDPTPLLGTQGQKGP LGDPGLPGLRGFPGEKGLPGIQGQPGRPGSKGDPGYPGPPGLPGARGPQGLPGEPGEKGK PGILGPPGLQGLPGSQGRKGLPGLPGLPGLDGLKGQKGSAGAPGQSETGPPGYSGEIGPK GDRGEPGWPGISIPGPPGERGFPGFPGKRGPVGPTGPMGRSPDSASPGPPGDQGLPGLDG IRGDPGNPGPPGETIFVRGDPGDSGVQGAPGNPGPRGQQGARGPPGSQGREGPKGPTGIH GPQGPPGALGQPGDQGFPGRPGPRGPTGFIGDPGEPGKVDDSCPTIPGPPGEAGQRGEDG SVGLPGPIGHPGPQGIKGEEGSYGLPGQDGLPGAPGPPGDQGSRGEQGYAGPRGPPGQTG VPGQPGPQIRSASGFLLVLHSQSDREPLCPQGMPKLWAGYSLLYLEGQEKAHNQDLGLAG SCLPVFSTMPFAYCNINQVCYYASRNDKSYWLASAAPLPTAPLSEEEIQPYISRCAVCEA PAQAVALHSQDQSIPPCPPNWRSLWIGYSFLMHTGSGDQGGGQSLMSPGSCLEDFRSAPF IECQGQRGTCQFFANEYSFWLTTVVPELQFASAPLSGTLKEGQEQRKKISRCQVCLKHG NT seq 5040 nt NT seq  +upstreamnt  +downstreamnt atggattcatttgaatggattaagtggcttatcacagctgcctggtggctgctgattgtt ttttcaagtcaaggaattgatgggggaggatatgcatatattgatccatgtgggggacag gattgttcagtttgtcggtgctttccagaaaaaggatcaaggggtcagcctggtgagctg ggagctcaaggtccgattgggtccttgggatctacaggaccagctggtctgccaggggaa aaaggacagagaggtgagaatgggaagcctgggccagctggagaaaaaggtgataagggc ccaaccggagtcccaggatttcctggtttagatggtgttcctggcctcccaggaagggaa ggacccagaggcaagcatggtttggacggctgcaatggctcgagaggagacccaggattc ccaggagaaaacggttatatgggaccaagaggtccttatggaattccagggcaaaaagga gaaaaaggaaattcagtgtatattttacattttggaaaaggacttccgggggagagaggt gatcctggaccccctggcctgcctggaccaagggggtcaagaggtacaacgggcccatct ggatacccaggccatccaggcttgcctggtgttccaggttaccctggtttgccaggtgaa cagggaaatccagggattggagtggatggacaaaagggggagccgggtgacattggactc cctgggccacctgggtcaccgctgttagttggacctcctggagctcagctgttcaaaggc caaaagggccaaaaaggattacctggggtaacaggatacagagggccacgtggacccaaa ggcatacttgggggaggagaaaaaggtgaaaaaggccttcctggatttcctggattgcgg ggtcatcctggttcttatggacctgcaggttctcctggaatgaagggcgaaacaggattt gctggttttcctggacaacctggctatccaggcattcagggggatccaggagaaaaaggg cccccaggtcctcctggagctgttggaactccactgcttcctataaaaggtccacgagga gatcctggatttccaggtcctgttggtgaaatggggtcagttggaccaattggtccttca ggccttctaggaagaccaggatatgatggaacaagtcttcctggcctgccaggagtaaga ggggcaccaggacctcaaggctttcaaggggaccctggtttgcctggaacaggtgaatta atcccaggaagaccgggatttcctggaccaccaggcctgccagggcagccaggaagacaa ggcttacctggactacccagtgtaatctgtacagacagagggatccctggagaacctgga ccaaaaggtcagattggccttccaggaagaaaaggggcaaaaggagagaagggtaatcaa ggcctctgctcatgtgatgctggtcctcctggtgcccgtggtgtgcaaggacctccaggt actccaggaaggaaaggacaaatgggatcccctggaagacacggagaaaagggcgaccca ggcttatctggtgcagtgggatcaccagggctccctgggactcctggttctgctggacag catggagaaaaaggagagaagggtgatccaggaagagttagaataaaaggattaaaaggt gaaagaggacctactgggcttccaggatttccaggccaaagaggtcttgatggcagagat ggggaactaggattgccaggggaaaaaggagctgagggcgactctggagtagcaattccg ggtgataaaggattccctgggctcccgggacctcctggggtaaaaggccagatgggattg cccggtttggggcttcctgggtctccaggagccagaggtagccctggagactctggtgac atgggtaatgttgggccacctggtccaaaaggccagaaaggtgaaactgtctgcattaca tcaccatatcctggaaatccaggtcccccgggttttaaaggtgttcaaggacaaaaaggt ttaaaaggactccctgggcatcctggaccaaatggctttgatgggcaaaaaggccatcga ggaaggccaggagcaggaatccctgggccagaaggctttcgaggcacggctggtgatcct ggtgatgaaggtgaaagaggatctacaattgatggcaaaaatggccttccaggtccccct ggcaaagatggtcagaaaggtcttccaggtgacaccacatatggccctccaggaatccca ggcaccaggggactgccaggaccccctggtgcacagggagcaaggggaaatccgggcatt actggacttcaaggaatgagacaacctggtaccccaggatttccaggtgccaaaggtttt agaggcccagaaggtgatgtaggagcaccaggctgcccaggcttccctggctcaccatgt gtcccaggcttaccaggaccacctggactcagaggtgtcatgggcctgccaggacctcaa ggcttaccaggttttaaaggtcagaggggagacaggggcctggctgggccccctggaatc aaaggtctcaaaggctctctgggctcacgaggtctcccaggtcctccaggctcacgaggt cccccaggacttccaggaaatagaggacctgttggcttcccaggagaaacaggaagcaaa ggcattcaaggaccccagggattcccaggactcccaggaatacaaggcccaatgggaatc cttggtgtaaaaggtgaagaaggaaaaatgggtctacctgggcctagtggagaatgtgga gatatgggaataaaaggtgagagggggcctccaggagacagcggctgcgttaacctccgt ctggagaagggccaaaggggggacccagggtttcctggggagcatggactgagaggtgac agaggtgaaaaaggcaatactggtttgagaggcacacgaggatttccaggaaagaatggt gttccaggactaccaggtgatcaaggtgacactggagtgatggggtttccaggatcacgg ggtttgcctggaccaaagggccttcaaggaatgacaggttttcaaggagaaccgggtgac cagggtgatgttggcttaccaggaaaccctggatatccaggactgactggctccaaagga tgtaaaggcaagagaggtgacccaactcctctgcttggtacacaaggtcagaaagggcct ctgggagatccaggattgccaggacttcgtggatttccaggggagaagggtttaccaggt atccaaggacagcctggaagaccaggctccaagggtgaccctggatatccagggccacct ggattaccaggagcgagaggtcctcaaggattgccaggagaacctggagaaaaagggaaa cctggaattttgggacctccaggattgcaagggttacctggatcccaaggcagaaaaggt cttcctggactgcctggactgcctggactggatggactaaaaggtcaaaagggttctgca ggagctccaggtcagagtgagacagggcccccaggatactcaggagaaattggaccaaaa ggagacagaggtgaacctggatggcctggtatttctattccagggccccctggagaaagg ggattcccaggatttccaggtaaaagaggacctgttggacccactggacctatgggaaga tctcctgatagtgcctcccctggtcctccaggcgatcaaggattacctggtttagacggc atcagaggtgatcctgggaatcctggtcctcctggagagacgatctttgtgcgaggagat ccaggtgatagtggtgttcaaggggcaccaggtaatcctgggccacgaggacagcaggga gccagaggccctccagggagccaaggaagagaaggcccaaagggtcctacgggcatccat ggcccacagggtccacctggtgctttaggacaaccaggagaccaaggttttccaggaaga cctggtcccagaggtcccacaggtttcataggtgaccctggtgagccagggaaagtggat gattcatgccctacaatcccagggcctcctggggaagcaggccaaagaggagaggatggc tctgtaggattaccagggccaataggccaccctggaccccaaggcataaaaggtgaagaa ggatcatatggcctgccaggtcaagatgggttacctggggcacctggaccaccaggggac caagggagccgaggagagcaaggatatgctgggccacgaggtccacctggccagactggt gtcccaggacaaccaggcccccaaattagatctgcaagtggattcttgctcgtccttcac agtcagtcagacagagaaccactctgcccacaggggatgccaaagttatgggctggctat agtctgctgtacctggagggacaagaaaaagcccataatcaagatcttggtctggcaggg tcctgcctgcctgtgtttagtaccatgccctttgcctactgcaacatcaaccaggtgtgt tactatgccagccgcaatgacaagtcctactggctggccagcgcggccccgctgcccacg gcgccgctgtctgaggaggagatccagccctacatcagcagatgtgctgtgtgtgaggcc cctgcacaggctgtggcactgcacagccaggaccagtccattcccccctgcccacccaac tggaggagcctttggataggatactcatttttgatgcacactggatctggtgaccagggt ggtggacagtcccttatgtcacccggaagctgcctggaagacttcagatcagcaccattc atcgagtgccagggccagcggggaacgtgtcagttcttcgctaatgaatacagtttctgg ctgaccaccgtggtgcctgagctgcagtttgcttcagcccccctgtcagggactcttaaa gaaggacaagagcagaggaagaaaatcagtagatgccaggtatgcctgaagcatggctaa

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