Geospiza fortis (medium ground-finch): 102044786
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Entry
102044786 CDS
T03755
Symbol
RTF1
Name
(RefSeq) RTF1 homolog, Paf1/RNA polymerase II complex component
KO
K15178
RNA polymerase-associated protein RTF1
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gfr03021
]
102044786 (RTF1)
Transcription machinery [BR:
gfr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
102044786 (RTF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Plus-3
Motif
Other DBs
NCBI-GeneID:
102044786
NCBI-ProteinID:
XP_005419474
UniProt:
A0A6I9HG21
LinkDB
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Position
Un
AA seq
585 aa
AA seq
DB search
MKRQMNKAASSGSSDKDSSAESSAPEEGEVSDSESNSSSSSSDSDSSSEDEEFHDGYGED
LMGDEEDRARLEQMTEKEREQELFNRIEKREVLKRRFEIKKKLKTAKKKEKKEKKKKQEE
EQEKKKLTQIQESQVMSHNKERRSKRDEKLDKKSQAMEELKAEREKRKNRTAELLAKKQP
LKTSEVYSDDEEEEEDDKSSEKSDRSSRSSSSDEEEEKEEIPPKSQPVSLPEELNRVRLS
RHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAEITGVVETAKVYQLGGTRTNKG
LQLRHGNDSRVFRLEFVSNQEFTESEFMKWKEAMFSAGMQLPTLDEINKKEVSIKEALNY
KFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKAMAEDLGDQDKAKQIQDQLNELEER
AEALDRQRTKNISAISYINQRNREWNIVESEKALVAESHSMKNQQMDPFTRRQCKPTIVS
NSRDPAVQAAILAQLNAKYGSGVLPDAPKDINKGQGKDKDVNSKSASDLSEDLFKVHDFD
VKIDLQVPSSESKALAITSKAPPAKDGAPRRSLNLEDYKKRRGLI
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgaagagacagatgaacaaagctgcctcttccggcagctcggataaagacagctctgct
gagagctcggcgcctgaagagggagaagtctctgactcagaaagcaacagctcctcatct
agctcagattcagattcttcatcggaagatgaggaattccatgatggctatggagaagac
ctgatgggagatgaagaagaccgagctcgactggaacaaatgacggaaaaggagagagag
caggaactgtttaaccggatagagaagagagaagtgctaaagagaagatttgaaataaag
aaaaaactaaaaacagcaaaaaagaaagaaaagaaagagaaaaagaaaaagcaagaggaa
gagcaggagaagaaaaaactcacacagatccaggaatcccaggtcatgtcacataacaaa
gagcggagatcaaagcgggatgaaaaactagacaagaaatctcaggcaatggaggagcta
aaagcagaaagagagaaaaggaagaacagaacagctgaattgcttgcaaaaaaacagcca
ttaaaaactagtgaagtatactctgatgatgaagaggaggaggaggatgataagtctagt
gagaaaagtgatcgctcatccagatcgtcatcctctgatgaagaggaagagaaagaagaa
attcctcccaagtcccagccagtgtccctgcctgaagagctgaaccgagtgcggttgtcg
cggcacaagctcgagcgctggtgtcacatgcccttctttgccaagaccgtcaccggctgc
tttgtccgcattggcattggcaatcacaacagcaaacctgtttatcgggttgctgaaata
actggtgtggtagagactgcaaaggtttaccagcttggtggcacacggacaaacaaaggc
ctacagttgcggcatggcaatgattcgcgtgtgtttcgcttggagtttgtctcaaatcag
gaatttactgaaagtgaatttatgaagtggaaggaagcaatgttctctgctgggatgcag
ctacccacactagatgagataaacaagaaggaagtgtccatcaaagaagccctcaactac
aagtttaatgatcaggacattgaagagattgtgaaggagaaggaaaggttcagaaaagca
cctccaaattatgccatgaagaaaactcagctattaaaggagaaggctatggctgaggat
ttgggggaccaagataaggccaagcagattcaagatcagcttaatgaacttgaagagaga
gcagaggccctggatcgtcagcgaacaaaaaatatttctgcaatcagttacatcaaccag
agaaacagagagtggaatatcgttgagtctgagaaggctcttgtggctgaaagtcacagc
atgaagaaccaacaaatggacccctttactaggcggcagtgcaagcccacaatagtgtct
aattccagagatcctgctgtccaagctgccatccttgcccagctaaatgcaaaatatgga
tctggtgtgttaccagatgctccaaaggacataaataagggtcaaggaaaagataaagat
gtgaactctaaatcagctagtgacctctcagaagatcttttcaaagtgcacgactttgat
gtaaagattgatcttcaggttcccagttcagaatctaaggcactggccatcacctccaag
gctcctccagcaaaagatggtgcccctcggcgatcattgaacttggaggactacaaaaag
agacgggggcttatttga
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