KEGG   Geospiza fortis (medium ground-finch): 102044817
Entry
102044817         CDS       T03755                                 
Symbol
COL22A1
Name
(RefSeq) collagen alpha-1(XXII) chain
  KO
K16630  collagen type XXII alpha
Organism
gfr  Geospiza fortis (medium ground-finch)
SSDB
Motif
Pfam: VWA VWA_2 Collagen Laminin_G_3 Laminin_G_2
Other DBs
NCBI-GeneID: 102044817
NCBI-ProteinID: XP_014164777
LinkDB
Position
Un
AA seq 668 aa
MRRGPRGSVSVRVRLSVRVRVSVCALLPCPPIPADSSAGRARVGAGLQAVDWISNKPRTL
EKRGPDVRKEIWIRPWWEGAVCSSCWFFSRWCSAGREPRHNEQANPLCVAELSTPSFPEP
WTVVEFFHSKQGCKSVHYDLVFLLDASSSVGKEDFEKVRQWVSNLVETFEIGPDKTRVGV
VRYSDRPTTEFDLGKYKTREEIKEAARQIQYYGGNTNTGDALRYITTYSFSKEAGGRLSD
RTVKKVAILLTDGRSQDFVLDPATAAHQAGIRIFAVGVGEALKEELDEIASEPKSAHVFH
VSDYNAIDKIRGKLRRRLCENVLCPNVHVEGDRFKHTNGGTDEIPGFDLMDSFSVKQIFG
MKEDGIQSAYVRLGSFPVVQKTEDVFPQGLPDEYAFVTTFKFRKASRKEDWYIWQIIDKY
GIPQVSIRLDGENKALEYNAVGLTRDAVRVVFRNARVSDLFDRSWHKIALSIQAKAVSLY
IDCKLVQVLPIEDRENIDIQGKTVIGKRLYDSVPIDFDLQRMVIYCDSRHAELETCCDIP
SGPCQVTVLTEAPPLEVRPTVGSEQVGHLKIFNCSCPPGQKGERGPLGFEGPKGQKGERG
IPGLPGLRGEKGESGKAYGIGEKGEKLHSPLGSAWVGDEAEIQELSGVSDHPSSSAITYL
GSEAVSWW
NT seq 2007 nt   +upstreamnt  +downstreamnt
atgcgcagggggcctcggggcagtgtgtctgttcgtgtccgtctgtctgtgcgtgtccgt
gtgtctgtctgtgcgctgctgccctgcccgcccatcccggctgacagctccgcagggcgc
gcccgggtcggagccgggctccaggctgtggattggatttccaacaagcctcgcaccctg
gagaaaagaggacctgatgtgagaaaggagatatggatacgtccatggtgggaaggcgcc
gtgtgctccagctgctggttcttctcgcgttggtgctcagcggggagagaaccgcggcac
aacgagcaggcaaatcctctctgtgtagctgagctatccactccctcctttccagagcca
tggactgttgtggaattcttccattccaagcagggttgcaagagcgttcactacgacctt
gtcttcctcttggacgcctcctccagcgttggaaaagaagattttgagaaagttcgtcag
tgggtgtccaatttggtggaaacctttgagattggcccagacaagactcgagtgggggtg
gtgcggtacagcgatcggccgaccacagagttcgacctgggcaagtacaaaacccgtgag
gagatcaaggaggctgcacgacagattcagtattatgggggtaacaccaacactggagat
gctctcaggtacatcaccacctacagtttttccaaagaagccggtgggagacttagtgat
cgaacagttaaaaaagtggccatccttttgactgatggaaggagccaggattttgtcttg
gatccagccactgcagcccatcaggctgggattaggatttttgctgtgggtgttggagaa
gccttaaaagaggaacttgatgagattgcttcagagcccaagtctgctcacgtgtttcat
gtctctgattacaacgccatcgacaaaattcgggggaagctgaggaggcgtctctgtgag
aatgtcctgtgcccaaatgtccacgtggaaggagaccggttcaaacacaccaatgggggc
actgatgagatcccaggatttgacctgatggattcattcagcgtgaagcagatttttgga
atgaaagaagatgggattcagagtgcttatgtacggcttggaagctttcctgttgttcag
aaaactgaagatgtatttccacaaggcctgcctgatgaatatgcctttgtaactaccttc
aaattccggaaggcttccaggaaggaggactggtatatctggcagattattgacaagtat
ggcataccacaggtgtcaatcaggctggatggggagaacaaggctctggagtacaacgcc
gtggggctcaccagggatgctgtcagggtggtgttccggaacgcgcgcgtcagcgacctg
tttgaccgcagctggcacaaaatcgccctcagcatccaggccaaggctgtctcgctgtac
atagactgcaagctggtgcaggtgctgcccattgaggacagggagaacattgacattcaa
ggaaagactgtgattggcaaacgcttgtatgacagcgtccccattgattttgatcttcag
aggatggtgatttactgtgactcccggcacgccgagctggagacctgctgtgacattccc
tctggaccatgccaggtcacggtcctgacggaagcacctcccctggaagtgagacccact
gttggcagtgagcaagttggacatctcaagattttcaactgctcttgtcctcctggacaa
aagggggagaggggtccacttggctttgaaggtcccaaaggtcaaaagggagaaagaggc
atcccagggcttcctggactccgaggagaaaaaggagagtcaggcaaagcctatggcata
ggagagaaaggagaaaagttacattctccacttggctcagcctgggttggagatgaagca
gaaattcaggagttgtcaggggtgtctgaccaccccagttcctcagcaataacctactta
gggagtgaagcagtgtcgtggtggtga

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