Geospiza fortis (medium ground-finch): 102044836
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Entry
102044836 CDS
T03755
Symbol
DHX34
Name
(RefSeq) DExH-box helicase 34
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102044836 (DHX34)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gfr03041
]
102044836 (DHX34)
Enzymes [BR:
gfr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
102044836 (DHX34)
Spliceosome [BR:
gfr03041
]
Complex C
Other components
Step II factors
102044836 (DHX34)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
WHD_HA2
Helicase_C
Motif
Other DBs
NCBI-GeneID:
102044836
NCBI-ProteinID:
XP_005431543
LinkDB
All DBs
Position
Un
AA seq
400 aa
AA seq
DB search
MSLCVPSVIMVDEAHERTLHTDVLFGLIKDIARFRPQLKVLVASATLDTERFSAFFDNAP
VFRIPGRRFPVDIYYTKGVVTTNIAETSVTIDGIVYVLDPGFCKQKSYSARTGMESLVVT
PCSKASANQRAGRAGRVAPGKCFRLYTAWAFQHELEETAVPEIQRADLGALVLLLKSLAH
HGTGSTGSTGRDWEWGMNHLNHLGELTTLGRRMAELPVEPMLAKMILASEQYGCTEEVLT
VAAMLSVNNAVFYRPKDKVLHADSARVAFSVPGGDHLVLLNVYNQWAASGHSLQWCYEHF
VQARSLRRARDVREQLQGLMERVEIAPSSCGGNLDLVRKPRWVLYHELVCTSKEFMRQVI
EIDSSWLLEVAPHYYQAKELEDGSGRKMPKKAGKSREELG
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgtgtgtccccagcgtgatcatggtggacgaggcccacgagcgcacgctgcac
acggacgtgctcttcggcctcatcaaggacatcgctcgcttccggccgcagctcaaggtg
ctggtggcctcggccacgctggacaccgagcgcttctcggccttcttcgacaacgcgccc
gtcttccgcatcccggggcggcgcttccccgtggacatctactacaccaagggggtggtg
accaccaacatcgccgagacctcggtgaccatcgatggcatcgtctacgtgctggacccg
gggttctgcaagcagaaaagctacagcgcccgcacgggcatggagtccctggtggtgaca
ccgtgctccaaggcctcagccaatcagcgcgcgggccgcgccggccgcgtggcgcccggg
aagtgtttccggctctacacggcctgggcgttccagcacgagctggaggagacggcggtg
cccgagatccagagagccgacctgggggcgctggtgctgctgctcaagagcctcgctcac
cacggtactgggagcactgggagcactgggagggactgggaatggggaatgaaccacctg
aaccacctcggggagctcaccacgctgggccggcgcatggcggagctgccggtggagccc
atgttggccaagatgatcctggcgagcgagcagtacggctgcacggaggaggtgctcacg
gtggcggccatgctctcggtgaacaacgccgtgttctaccggcccaaggacaaggtgctc
cacgccgacagcgcccgcgtggccttcagcgtgcccgggggcgaccacctggtgttgctc
aacgtctacaaccagtgggcggccagcgggcactccctgcagtggtgctacgagcacttt
gtgcaggcgcgctccctgcgccgggcgcgcgacgtgcgcgagcagctgcaggggctgatg
gagcgcgtggagatcgccccgtcctcctgcgggggcaacctggacctcgtccgcaagccc
cgctgggtgctctaccacgagctggtgtgcacctccaaggagttcatgagacaggtgatc
gagatcgacagctcctggctgctggaggtcgcccctcactattaccaggccaaggagctc
gaggacggcagcggccgcaaaatgcccaaaaaagccggaaaatcgcgggaggagctgggc
tga
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