Geospiza fortis (medium ground-finch): 102044881
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Entry
102044881 CDS
T03755
Symbol
LRPPRC
Name
(RefSeq) leucine rich pentatricopeptide repeat containing
KO
K17964
leucine-rich PPR motif-containing protein, mitochondrial
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
gfr03029
]
102044881 (LRPPRC)
Mitochondrial biogenesis [BR:
gfr03029
]
Mitochondrial quality control factors
Mitochondrial respiratory chain complex assembly factors
Complex-IV assembly factors
102044881 (LRPPRC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PPR_2
PPR
PPR_3
PPR_1
PPR_long
ANAPC3
HEAT_Nup120
Motif
Other DBs
NCBI-GeneID:
102044881
NCBI-ProteinID:
XP_005416247
UniProt:
A0A6I9HC65
LinkDB
All DBs
Position
Un
AA seq
1335 aa
AA seq
DB search
MSQIRFLTLAPQEEGSVKEEPVSEVGTRRTWQFDWALNKVDNSVRKTGRIPKTLLLKIFQ
EISNAGCPASNHTLLLLQSCGAVLPEVLSSERTELAHMIWDKMKELGAVYDTSHYNALLK
VYLQNEHKFSPTEFLARMEEANVQPNRVTYQRLIAAYCNEGDIEGASKILGFMKSKDLPI
TEAVFSSLLKGHARSGDMKSAENILSVMRMAGVEPGPDTYLSLLNVYAEKGDAESIKKTL
EQVEKTEGYLMDRILMQVIFSLAKAGYPQHIEDIKGRIRFERELIPDVMNLCLTLITHGF
EDISFSILKSLSHLSREDMDQGSFFLQHCVNRNLPVNKLKQFCKELKEAKMHSAPLPFIL
RCALEANRSALAIDVMKMMKEEGLPLRPHYCWPLLVAYQKENNLKGIFEVLKVMHKLGVE
LDAETYTDYVFKNFADTETARAQLKENGCLFESAGLCVAELRSEALQGRLDKVLSILSSA
NTPAIDNRLFRNSLFMGFKSSDDVHLWSKITEVLYKDERYCLTPPGPTEAVGYFLYHLID
SMSDSEVQAKEERLRQYFHQLKKMNIVIPTSHYSGICRLLDSSQVPELIKDVRLLCHKPS
PSTDNIPESAKSDVSALEKKLEKRKAENQPITDVLKQLIHALCEEENMQKALEVKAKYEP
DMVVGGYAALINLCCRHDNVEEAMNLKEKVFPKNSPVALDSGKYVALIEVLEKHGRLEDA
INILTEMKEKDVPISGRTVASFLRILNAAATRGEVETVNRLHDTIANLGLVRTAALHAPL
ITVHLEKDDMPAALEALVSCYKKYGKILQLHNICCKLVEKGDADLLQKVSDFISREHGDM
MALYDLFFAFLQTGKYKEAKKVIETPGLRAHSGRLKWFAQKCILNNQMETLEQLVESTRN
LFECDRDEMYYHLLKLCESNKDWGKAEAIWTKIQEENIVPREKTLILLAGIFEKNGQVVP
FEVPKDRPEDSSSAAAGEELKIQMLCRKNKAKEAYNIFRRMQKDESHYRSCDILVKALLT
QDCLDEALDVKRIAETHIKGFTLNSAASSLLIISQVRRDYLKDALAVLKGMLDSGMLPTR
AAATALIQALAEKGDVKNLQVLENILGDITKSIRLPDSLISNAIALAHTKSNDLDAAVKY
LEPLLISGAQNPDQAVKSISYLLRKVSEEGLEPALEKFGAMAERVASQCGMYRPVTDLFL
QYITAGRVDDARSLIQRWGAIVQEKRTLGRFLARSASQPGQAKRIEALVELIPEHLDPAV
VYRYLLRCYELDGDVASVKATYEKAKAKNVELHEIALKSLATFLKKVGEPVPFTEPPEPL
KVYVEKWRNRRLAAS
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaatcaggttccttacacttgcacctcaagaggaaggaagtgttaaagaagaa
ccagtctcagaagttggaaccagacggacctggcagtttgactgggcgttaaataaagtg
gataactctgtcagaaaaactggccgcatccctaaaactcttctactaaaaatcttccag
gaaataagcaatgcagggtgtccagcgagtaaccacaccttgcttttgttacaaagttgt
ggtgctgtcttaccagaggtattgtcatctgaaagaacagaactggcccatatgatatgg
gacaagatgaaagaacttggtgctgtgtatgatacgagccattacaatgctttgcttaaa
gtctatcttcagaatgagcacaagttttctccaacagaattcttggccaggatggaggaa
gctaacgtgcagcccaatcgagttacataccagaggttgattgctgcttattgcaatgag
ggtgacattgaaggagcaagtaagattcttggatttatgaagagcaaagatctccccatc
actgaggcagtattcagtagtcttttgaaaggacatgcaagatcaggagatatgaaaagt
gcagaaaacatcctttcagtgatgaggatggctggtgttgaaccaggtccagacacctat
ttatcactgctgaatgtgtatgctgaaaagggtgatgctgagagcatcaaaaagactcta
gagcaggttgagaagactgaagggtaccttatggacaggattttgatgcaggtgattttt
agccttgccaaggctggatatccacaacacatcgaggatattaaaggacgcataagattt
gaaagggaattaattccagatgtaatgaacctgtgtttgactctgataactcatggcttt
gaagatatcagcttcagcatcttgaagtctttaagtcatttatcacgtgaagatatggac
caaggtagcttcttcttgcaacattgtgtaaatagaaatctgcctgtgaacaagctgaag
cagttctgtaaggagttaaaagaagcaaagatgcactcggcgccattaccatttattttg
cgttgcgctttggaggccaacagatcagccttggccattgatgtgatgaagatgatgaag
gaggaaggcttgccactcagacctcactattgctggccgctgctagttgcgtaccagaaa
gagaataatcttaaaggtatctttgaggtcctcaaagtgatgcacaaactgggagtggaa
cttgatgcagaaacttatacagactatgtttttaaaaactttgctgatactgaaactgcc
cgtgcccagctgaaggaaaatggctgcctgtttgaaagtgctgggctctgtgtagcagaa
ctaagaagtgaagcacttcaggggagactggacaaagttctttctatattgtcttcagca
aacacacctgctatagataatcgtctgtttagaaacagcctctttatgggttttaaaagc
tcagatgatgtacatctgtggagcaagataacagaagtgttgtacaaggatgaacgttat
tgcctgacgcctccaggaccaactgaagctgttggctattttctttatcacttgattgac
agcatgagtgactcagaggtacaggccaaggaggagcgtttgagacaatacttccatcag
ctgaagaagatgaatatagttatccctaccagccactacagcggcatttgcagactgctg
gactcctctcaagttcctgaattaattaaggatgtaaggttactgtgtcataaaccatcc
ccgtctacagacaacattccagaaagtgctaaatctgacgtgtctgctttggagaagaaa
ctagaaaagcgaaaagctgaaaaccagcctattacagatgtcttgaaacaactcatacat
gctctttgtgaagaagagaatatgcaaaaagcccttgaagtgaaagccaaatacgaaccg
gacatggttgtcggtggctatgcagccttaataaatttgtgctgtcgacatgataatgta
gaagaggcaatgaacctgaaagaaaaagtcttccctaagaattcacctgttgctcttgac
agtggaaagtatgtagcactgatagaagtcttagaaaagcacggtagactggaagatgct
attaacattctaacggagatgaaagagaaggatgttcctatctcaggcagaacagttgca
tcttttctccgcattcttaatgccgctgccacgcgaggtgaagttgaaacagtgaatcga
ttacatgacaccattgcaaacctgggcttggtgcgcactgctgcccttcatgcccctctg
attacagttcaccttgaaaaggatgacatgcctgcagctctggaagctttagtcagctgt
tacaagaagtatggtaaaattcttcaacttcataacatctgctgtaaactggtagaaaaa
ggagatgctgatcttctgcaaaaggtttcagattttataagcagagaacatggtgacatg
atggctctttacgatctcttcttcgccttcttgcaaacaggaaaatacaaagaggccaag
aaggtcatcgagactcctggcttgagagcacactctggaagattgaagtggtttgcacag
aagtgtatattaaataaccagatggaaactttggaacagttggtagaatcaactcgaaat
ctgtttgaatgcgatagagatgagatgtactaccacctgctcaaactgtgtgaaagcaac
aaggactggggaaaggctgaagctatttggactaaaattcaagaagaaaatattgttcct
cgtgagaagacactaattttacttgctggtatatttgagaaaaatggtcaggttgttcca
tttgaggtacctaaggataggcctgaagatagcagcagtgctgctgctggggaagaactg
aaaatacagatgctttgcaggaaaaataaagcaaaagaggcctacaatattttcaggaga
atgcagaaggatgagtctcattatcgttcctgtgacatccttgtaaaagcattgttaaca
caggattgtcttgatgaagcccttgacgtgaaacgcattgctgagacccacatcaagggc
ttcacactgaacagtgctgccagcagcctcctcatcatatcgcaagttaggcgggattat
ttgaaagatgccttggctgttttaaaaggaatgcttgacagtggtatgttgcctactaga
gcagcagctactgctctcattcaggccctggcagaaaaaggagatgtaaagaacctgcaa
gtacttgaaaacatcctgggagacatcacaaaatccattcgtttacctgactcactaatc
tctaatgcaattgcattagctcatacaaaaagcaatgaccttgatgctgctgtgaaatac
cttgagcctctgcttatctctggtgcacagaatcctgatcaagctgtcaaaagtatttcc
tatttgttaagaaaggtgtctgaggaaggattagaaccagctttggaaaaatttggtgcg
atggcagaacgagtggccagtcagtgtggaatgtacagacctgtcacagatcttttcctt
cagtatatcactgcaggcagagtggatgatgccagatcgttgatacagaggtggggtgca
atagttcaggagaagagaactttggggcgttttttggctagatcagcatctcaacctgga
caggcaaagaggattgaggcacttgtagaactgattcctgagcatctcgatccagcagtg
gtgtaccggtacctcttgagatgttatgaattggatggggatgttgcttctgtaaaggct
acatatgagaaagcaaaagcgaagaatgtagagctgcacgagatcgctttgaaatcttta
gcaacttttctgaagaaagtaggagagcctgtccctttcactgaaccccctgagcctctc
aaggtctatgtggaaaaatggaggaatagaagattggcagcatcatga
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