Geospiza fortis (medium ground-finch): 102044961
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Entry
102044961 CDS
T03755
Symbol
UBE3D
Name
(RefSeq) ubiquitin protein ligase E3D
KO
K20803
ubiquitin-protein ligase E3 D [EC:
2.3.2.26
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gfr04121
]
102044961 (UBE3D)
Enzymes [BR:
gfr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
102044961 (UBE3D)
Ubiquitin system [BR:
gfr04121
]
Ubiquitin ligases (E3)
HECT type E3
102044961 (UBE3D)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT_2
Motif
Other DBs
NCBI-GeneID:
102044961
NCBI-ProteinID:
XP_014162535
LinkDB
All DBs
Position
Un
AA seq
676 aa
AA seq
DB search
MYPSKYHRQQLQQPGISPKRGPQPPGRSRSKQDDPSSPTSSSFPGRREELPGEAPPRRAK
PGPASRSALRPLAGRVRGARAARECVFVYLAWYLLSLPIQRSSYGAVPGRTDPGSSRRWC
GSKAGDYSPTLTQKRLGIRKPLRPAGCADLDLLAWDPEGLIPGPPWPAAGKPGGAADPGT
PARHCLPRHRRGRAAGSCAWIAATPCSAAGLGRSDLGAVRRRRSRGDWLTARRWWSRHPW
KCYGGTRVLWFTGNPAIPRRRRCDGRAAAPRLRRREGGGFLRGAGMAAAFVMEIRRATQS
ALLVVRLIYFLLSIDVVFTLRESLKPNKNCIFYCQSCGDIVVNDRKFLRVLPLPSENWSD
LVEEWCCHPDPFARRTLHPQHGDCFVGDTFLLLNLRKESHVPESPVCCSEAGHHVSQSDS
NLKSKENTRVICKRCKTMLGETVSSGTIKYYVTEVVIQSTEGGFSPTPRSQFVQSIVTQC
LLELSSAKSTFRFTIKGDNGKTYILIWLLNSDTLLVESLGSSSSHSDFTLFGDILTPSSG
PVGSWNALKVLYQPCIQCRNKELADAWEDDMGVHPLKFPSETCLELLLILGRSTTSLPPS
LRCMNSFQVEYILNSLTAPPSGARMWRMGAMAVMPEAQPPPLMGSALTSCGSILEPAGIG
CVRHGEVLAASHRSHP
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgtatccttccaaataccacaggcagcaactccagcaaccgggaatctcacctaaaaga
ggcccgcagccccctggacgctcaaggtcaaagcaggacgaccctagcagcccaacgtca
agctccttcccaggaaggcgggaagagctccctggggaagctccaccacgaagggcgaag
ccaggccccgccagccgctccgcgctgcgccccctggcgggacgcgtgcgaggcgcgcgg
gctgcgcgggagtgcgtgtttgtttatctcgcctggtatttgctgagcttaccaatacag
cgcagttcctatggggcggtgcccggtagaacagacccaggctcctcccggcggtggtgt
ggcagcaaagcaggagattacagccccacgttgacacagaagagactggggataagaaaa
cccctgagaccagccggttgtgcagacctggaccttttggcttgggacccggagggactc
atccctgggcccccttggccagcggcgggcaagccggggggcgcagcagaccccgggaca
cccgcccgccactgcctcccgaggcaccgtcggggccgagctgctggatcctgcgcttgg
atcgcagccacgccatgcagtgctgcgggcttggggaggagtgacctgggagctgttcgg
cggagaaggagccggggggactggctgacagcccggcggtggtggagccgccatccctgg
aagtgttacggaggaacccgggtgctgtggtttacggggaaccctgcgatcccacgcagg
cggcgctgtgacgggcgggcggcggcaccgcgcctgcgccggcgggagggaggcggcttc
ctgcgcggtgccggcatggcggcagcgttcgtcatggagatcaggcgggcgacgcagagc
gcgctgctggttgtccgattaatatatttccttctatctatagatgtggtttttactttg
agggaaagcctgaaacccaacaagaattgcatcttttactgtcagtcctgtggtgacatt
gtcgtgaacgaccggaaatttctcagagttcttcctctaccgagtgaaaactggagtgat
ttagttgaagagtggtgttgtcaccctgacccctttgccagaagaactttgcaccctcag
catggtgactgttttgttggagacacttttcttctgttgaatttaagaaaggaatcgcat
gtgcctgaatctcccgtttgctgctcagaggctggacaccatgtttcacagagtgactcc
aacttgaagtcaaaagaaaataccagagtaatttgtaagcgctgcaagacaatgctggga
gaaacagtttcatcaggtaccattaaatattatgtcactgaggtggttattcaatcaact
gagggaggtttcagtccaacaccaaggtctcagtttgtacagagcattgttactcagtgt
cttttggaattatcctctgcaaaaagcacatttagattcaccataaaaggagataatgga
aaaacctatattctgatatggcttttaaattctgacactttgctggtagagtctttagga
agttcctcctcccacagtgattttacactgtttggagatatccttacacctagctctgga
ccagtgggatcctggaatgctctgaaagtcctttaccagccatgcattcaatgcagaaat
aaggagcttgctgatgcatgggaagatgatatgggagttcatcctttaaagtttccatca
gaaacatgtttggaattattgttgatactgggtcggagtaccacatctctgccaccttcg
cttcgatgcatgaactcttttcaggttgaatatattctcaattctttgacagctcctcct
agcggtgcacggatgtggagaatgggggccatggctgttatgccggaggcacaaccaccg
ccactgatgggttctgccttgaccagctgtgggtccatcctggagccagctggcattggc
tgtgtcagacatggggaagttctggcagcttctcacagaagccacccctga
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