Geospiza fortis (medium ground-finch): 102044997
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Entry
102044997 CDS
T03755
Symbol
THRA
Name
(RefSeq) thyroid hormone receptor, alpha
KO
K05547
thyroid hormone receptor alpha
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04080
Neuroactive ligand-receptor interaction
gfr04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
102044997 (THRA)
04081 Hormone signaling
102044997 (THRA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gfr03000
]
102044997 (THRA)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
gfr03310
]
102044997 (THRA)
Transcription factors [BR:
gfr03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
102044997 (THRA)
Nuclear receptors [BR:
gfr03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
102044997 (THRA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
102044997
NCBI-ProteinID:
XP_005430447
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Position
Un
AA seq
406 aa
AA seq
DB search
MEQKPSTLDPLSEPEDTRWLWGALPRGALWVPDSGVPPGYIPSYLDKDEQCVVCGDKPPG
YHYRCITCEGCKGFFRRTIQKNLHPTYSCKYDGCCVIDKITRNQCQLCRFKKCISVGMAM
DLVLDDSKRVAKRKLIEENRERRGGGXKSLQHRPNPSAEEWELIHVVTEAHRSTNAQGSH
WKQKRKFLPEDIGQSPMASMPDGDKVDLEAFSEFTKIITPAITRVVDFAKKLPMFSELPC
EDQIILLQGXCMEIMSLRAAVRYDPESETLTLSGEMAVKREQLKNGGLGVVSDAIFDLGK
SLSAFNLDDTEVALLQAVLLMSSDRTGLICVEKIEKCQETYLLAFEHYINYRKHNIPHFW
PKLLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFEDQEV
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggaacagaagcccagcaccctggacccgctgtcggagccagaggacacccggtggctg
tggggggccctgccccggggtgccctgtgggtccctgactcgggggtccccccagggtac
atccctagttacctggacaaagatgaacagtgcgtggtgtgcggggacaagccccccggc
taccactaccgctgcatcacctgcgagggctgcaagggatttttccgtcggaccatccag
aagaacttgcaccccacctactcctgcaaatacgatgggtgctgcgtcatcgacaagatc
acccgcaaccagtgccagctgtgccgcttcaagaagtgcatctccgtgggcatggccatg
gacttggtgctggatgactccaagcgggtagccaagaggaagctgatcgaggagaaccgg
gagcggcgggggggggggnncaaatccctgcagcaccgccccaaccccagcgccgaggag
tgggagctgatccacgttgtgacagaagctcaccgcagcaccaatgcccagggcagccac
tggaagcagaagcggaaattcctgcctgaggacatcggccagtcccctatggcctccatg
cctgacggggacaaagtcgacctggaggcgttcagcgagtttacaaaaatcatcaccccg
gccatcacccgcgtggtcgactttgccaaaaaactgcccatgttttcagagctgccttgt
gaggaccagatcatcctgctgcaggggnnctgcatggagatcatgtcgctgcgggcggcc
gtgcgctacgaccccgagagcgagacgctgacgctgagcggggagatggcggtgaaacgg
gagcagctcaagaacggcggcctcggcgtcgtctccgatgccatcttcgacctgggcaag
tccctctctgccttcaacctggatgacaccgaggtggccctgctccaggctgtgctgctc
atgtcctcagaccggacggggctgatctgcgtggagaagatcgagaagtgccaggagacc
tatctgctggcctttgagcactacatcaactaccgcaaacacaacattccccacttctgg
cccaagctgctgatgaaggtgacggatctgcggatgatcggcgcctgccacgccagccgc
ttcctgcacatgaaggtggagtgtcccaccgagctcttcccccctctcttcctcgaggtc
ttcgaggaccaggaggtgtag
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