Geospiza fortis (medium ground-finch): 102045022
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Entry
102045022 CDS
T03755
Symbol
ERMARD
Name
(RefSeq) ER membrane associated RNA degradation
KO
K25139
endoplasmic reticulum membrane-associated RNA degradation protein
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
102045022 (ERMARD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4209
Motif
Other DBs
NCBI-GeneID:
102045022
NCBI-ProteinID:
XP_005423311
LinkDB
All DBs
Position
Un
AA seq
672 aa
AA seq
DB search
MALPDSITTCLSQPVHYVICKLGFEKKDTYNIDTILSGNREVCWPAVTEHVCYLESDQSV
DYIKSIRSLGPVCESVNLYFKSLTKEQFVIQYASWFHWTNCTEVFLEVFDVLQSTQATEV
ALGLMKLTSCLERALGDVYLLKGDDCPFLLRDLLASEQLADVFGQAVMNVLRVFIGSPHG
LNLRNVLWHGFASPQEIPAKYCAMLLFLTAGLGQLLQTYLLQTKGVLVHRPYVIFISLEE
LDAFPDLNSEILAIAEELVKHSSFVLKIMLPFWIAALTAFKQSRYADSVILLLPQLEAGL
RLLFTTTNKCPNRLLTAESSALYTTFDEMLKKHLDNEEVNQLPVVLEEPAMESIFESDFL
WDFLNHQEGPRIRDRLSHGEINLETFPREIANQIVGFAITFLCRFSDEDMFSLKEHMVIK
PLMNCASCYQSRFHPVSRLKKQVLECMKSIHLWPELATVPEEQEQKIKGLEGNTEANTLI
LMISEILSQLQRYMPQDCCSSDDPINSILTERLLVELCGTRVCTLYSPRPVLEVVVILRK
ISAQCHQVSQQVIAGAGLRHTQWLNKTLRSRQRHNYRRMLSSIKFLSPVLRLILLLITLE
LVSVHSVCKKNPFDYQQYLKFLKSVLQYTENLVTYTSPDKNKWDETMELTKKTLINIKKI
TDRKLMLMHLAT
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgccagactcaatcactacttgcctttctcaacctgtacactatgtgatttgc
aaacttggatttgagaagaaagacacctataatattgatactattttatctggaaacagg
gaagtttgttggccagctgttacagagcatgtgtgttaccttgaatcagatcaaagtgtg
gattatatcaaaagcatacgatcattaggacctgtctgtgaatctgttaatttgtacttc
aaatctctgaccaaggagcaatttgtaattcagtatgcatcgtggttccactggacaaac
tgcacagaggtatttctggaagtgtttgatgttttgcaatctacacaagctacagaagtt
gctcttggcttaatgaaactaacatcatgcttggagcgagccttgggtgacgtgtattta
cttaagggtgatgattgtcctttccttctaagagatttgcttgcatctgagcagcttgca
gatgtctttggacaagctgtaatgaatgtactgagggtattcattggatctccacatggt
ttgaaccttcgtaatgttttgtggcatggatttgcatcaccacaagaaattcctgccaaa
tactgtgctatgctgctctttttaactgcaggattgggtcagttgttacagacttatctt
ctgcaaactaaaggtgttttagtacatcgaccttatgtgatcttcattagcttagaggag
cttgatgcatttccagatcttaatagtgaaatacttgccatagctgaagaacttgtaaaa
cactccagttttgtattaaaaattatgttaccattttggatcgctgctttaacagctttc
aagcaaagcaggtatgctgacagtgtgattctcttacttcctcagctggaagctggactt
agattgctcttcactacaactaataaatgtccaaatcgattgctaacagcggagtcttct
gctctctacaccacttttgatgagatgctaaaaaagcatttggataatgaagaagtcaac
cagctacctgtagttcttgaagagcctgccatggaaagtatttttgaaagtgacttcctt
tgggatttcttgaaccaccaggagggcccacgtataagagatcgtttaagtcatggagag
atcaatctagaaacatttcccagagaaatagctaaccaaatagttggatttgctattaca
tttctctgcagattctcagatgaggatatgttttctcttaaggaacacatggtcataaaa
ccactgatgaactgtgcaagttgctaccaatctcgatttcatccagtttcccgactcaag
aaacaggtgctggaatgtatgaagagcatccatttatggcctgaattggcaacagtgcct
gaggaacaagaacaaaagattaaagggttggaaggaaatactgaagctaatactttaatt
ttgatgatatctgaaattttatctcagttgcagcgttatatgccccaggattgctgtagt
tcagatgatcctatcaatagtatcctaacagagaggctgctggtggaactttgtggtaca
cgcgtttgcacgctgtattccccacgacctgtcctggaagtagtggtgatactccgcaaa
ataagcgcgcagtgccatcaagtgtcccaacaggttattgccggcgctgggctgagacac
acgcagtggcttaacaagactctgcgctcccgccagaggcacaactatcggcggatgctg
agcagcattaaatttttgtctccggtgttgcggctcatcttactgttgattactctggag
ctagtcagtgttcattcagtttgtaagaagaatccttttgattatcagcagtatctaaag
tttttgaagtcagtcttgcagtacactgagaacttggtgacatacacaagccctgacaaa
aacaagtgggatgaaaccatggaacttacaaagaagactttgataaatataaagaaaatc
actgacaggaagctaatgttaatgcatctagctacatga
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