Geospiza fortis (medium ground-finch): 102045038
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Entry
102045038 CDS
T03755
Symbol
SMARCD2
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102045038 (SMARCD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gfr03021
]
102045038 (SMARCD2)
03036 Chromosome and associated proteins [BR:
gfr03036
]
102045038 (SMARCD2)
Transcription machinery [BR:
gfr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
102045038 (SMARCD2)
Chromosome and associated proteins [BR:
gfr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
102045038 (SMARCD2)
PBAF complex
102045038 (SMARCD2)
GBAF(ncBAF) complex
102045038 (SMARCD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
102045038
NCBI-ProteinID:
XP_014165878
LinkDB
All DBs
Position
Un
AA seq
444 aa
AA seq
DB search
MPPGGRMPMAGLQVGPPGAPPYGAATPLRPGLPQAMMDPFRKRLLTPPASSPGPHSRGGV
KRRKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPLTQKRKLR
IYISNTFTPAKEEGEGGERVASWELRVEGKLLEDPSKQKRKFSSFFKSLVIELDKELYGP
DNHLVEWHRMPTTQETDGFQVKRPGDVNVKCTLLLMLDHQPPQYKLDPRLARLLGVHTQT
RASIMQALWLYIKHNKLQDSHEKEFINCNRYFRQIFNCVRMRFSEIPMKLAGLLQHPDPI
IINHTISVDPNDQKKTACYDIDVEVDDPLKAQMSNFLASTTNQQEIASLDAKIHETIESI
NQLKTQRDFMLSFSNNPQDFIQEWIKSQRRDLKIITDVIGNPEEERRAEFYQQPWAQEAV
GRHIFAKVQQRRQELEQVLGIRLT
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgccccccgggggcaggatgcccatggcagggctgcaggtgggacccccgggggcgccc
ccgtacggagcagcgaccccgctgaggcccggcctgccccaggccatgatggatcccttc
aggaagcgactgctgacccccccggcttcctctccaggtccccattcaagaggaggggtg
aagaggaggaagatggctgacaaggtgctgccacagaggatcagggagctggtcccagaa
tcccaggcctacatggacctgctggccttcgagcgcaagctggaccaaaccattgcccgc
aagaggatggagatccaggaggccatcaagaaacccctgacgcaaaagcggaagctcagg
atttacatctccaacaccttcacccctgccaaggaggagggagaggggggagaacgtgtg
gcctcctgggagctccgtgtggaggggaagctgctggaggatcccagcaagcagaagagg
aagttctcctccttcttcaagagccttgtgatcgagctggacaaggagctctatgggccg
gacaatcacctggtggagtggcaccggatgcccacgacccaggagaccgacggcttccag
gtgaagcgtcccggggatgtcaatgtgaagtgcaccctgctgctcatgttggaccaccag
cccccccagtacaagctggacccacggctggcccggctgctgggggtgcacacccagacc
agggccagcatcatgcaggccctgtggctctacatcaaacacaacaaactgcaggacagc
cacgagaaggagttcatcaactgcaaccgctacttccgccagatcttcaactgcgtccgc
atgcgcttctctgagatccccatgaagctggcagggctcctgcagcacccagaccccatc
atcatcaaccacaccatcagtgtggaccccaatgaccagaagaagacagcctgctacgac
atcgacgtggaggtggacgatcccctcaaagcccagatgagcaatttcctggcctccacc
accaaccagcaggaaatcgcctccctggatgccaagatccacgagaccatcgagtccatc
aaccagctgaagacacagagggatttcatgctgagcttcagcaacaacccccaggatttc
atccaggagtggatcaaatcccagaggagggacctcaagatcatcacggatgtgatcggg
aaccccgaggaggagcggcgggccgagttctaccagcagccctgggcgcaggaggccgtg
ggcagacacatcttcgccaaggtccagcagcgccggcaggaactggaacaagtgctcggg
atccgcctgacctaa
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integrated database retrieval system
