Geospiza fortis (medium ground-finch): 102045145
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Entry
102045145 CDS
T03755
Symbol
TBC1D2
Name
(RefSeq) TBC1 domain family member 2
KO
K20165
TBC1 domain family member 2A
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gfr04131
]
102045145 (TBC1D2)
Membrane trafficking [BR:
gfr04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
102045145 (TBC1D2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
PH
PH_11
PH_8
PH_alsin
PH_SSH1-like_1st
Motif
Other DBs
NCBI-GeneID:
102045145
NCBI-ProteinID:
XP_005425082
UniProt:
A0A6I9HMD5
LinkDB
All DBs
Position
Un
AA seq
908 aa
AA seq
DB search
MKKGPESGAYTLAAPGNLVESDPDTNSSNGTSAREKDMLPSPGELENVPVKTSTETSRKK
LCGYLNKLGIKGPIKTWKSRWFFYDENKCRLLYYRTAQDINPLGSIDLSSASFDCKMENG
EGVFEIRTPSRAFTLKAISKQAMMYWLQQLQMRRWEFCNTQSRFPVGSSQLVNEPLAGRT
NVVDNEDFLPLVKTPTEAVGLKAASLPAPQTSTTLQNISLKHPWTEIQNTVYNICGSKQL
WGSNGNVFSFDELQEHPENVDEEQEAKGAVKEGTLEDGRMGPRLNWIRKARWMNSGFPGS
EELSREKNSVDKVSVLQQQILTLTEEVKSQKELVKLLHKALEAAQQEKRVSSMYLTATED
KDRLELVRHKVRQIADLTSRLEALEQEKKELEQILTLRDSHIQELKEHVQLLMEKNHAKQ
EVIMTLTEQMARELSDPLQKANTITVETLYKQQEEIEHLKDDIDAYKTQNQFLNSEIHQV
TRLWTSVAENEKALLMKCACLQARNCQMESKYLTVLRKLQEAVPGLPNSHAELVKNLIQE
ALQWDVKEEAEEGFNLNPVSEYDEYGFMTVPDYEIEDWKLLAKIQALEMKSNKLRSQEIV
EKPLRDRWNSIGELNPCAELKSLIRSGIPVEHRXXXLLEQSRSTEHPACRQIELDLPRTL
TNNKHFSSPTSQLIPRLRRVLLAFSWHNPPIGYCQGLNRLAAVALLVLEDEESAFWCLVY
IVENLMPADYYSETLITSQVDQRVFKDFLSEKLPRLMAHFEQYRIDVSLITFNWFLVAFV
DSLVSDILLRVWDAFLYEGTKVIFRYALAIFKYNEEEILRIHDSVEIYQYLRFFTRMITD
GRKLMNIAFNDLNPFPMKLLRNRRSMHREELEAELCELEQIKAAYVKERAEQGPQDLEEV
VSEEEEES
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaggaccagaaagtggagcatatacgcttgctgctccaggcaatttagtggag
tcagatccagacactaacagcagcaatggaacctcagcaagagagaaagacatgcttcct
tctcccggagaactggaaaatgtaccggtgaaaaccagcacagaaacatccagaaaaaaa
ctctgtggttatttaaataagctgggcatcaaggggccaatcaagacctggaagtctcgc
tggttcttttatgatgaaaacaaatgccgcttactgtactacagaactgcccaggacatt
aatcctttggggtctatcgatctctccagcgccagctttgactgcaaaatggagaatggg
gaaggagtttttgagatcagaacaccaagcagagcttttactttgaaggcaatcagcaaa
caagcaatgatgtactggctgcagcagctgcaaatgagacgttgggaattttgcaacact
cagagcagatttcctgtgggcagctcccagcttgtgaatgaacctctggctggaagaaca
aatgtagttgacaatgaagactttctgcctcttgtgaaaacaccaacagaagcagtgggt
ttaaaggcagcatctttgcctgcaccccaaacatctactactttgcagaacatctccctg
aagcacccttggacagagatacaaaacactgtctacaatatttgtggctccaagcagctc
tgggggagcaacggaaatgtctttagctttgatgaattacaagaacatcctgaaaatgtg
gatgaggagcaagaggcaaaaggcgcagttaaggaagggaccctggaagatgggaggatg
gggcccaggctgaactggattaggaaggccaggtggatgaacagtggcttcccaggctct
gaggaattgtcgagggagaagaactcagtggataaagtgagtgtccttcagcaacagatt
ctgacgctcacagaggaagtcaagtctcagaaggaactagtcaaacttctccacaaagct
ctggaggcagcccagcaggagaagcgagtatctagcatgtatctcactgcaacagaagat
aaggacaggctggagctggtgcgccacaaagtgagacaaattgcagatctgacaagtcga
ctggaagctcttgaacaagaaaagaaggaactggagcagatactgactttgagagatagc
catatccaggagctcaaggaacatgtgcaacttctgatggagaagaaccatgccaaacaa
gaagtcatcatgaccttgacagaacagatggcccgagagctctctgaccccctgcaaaaa
gccaacactatcactgtagagactttgtataagcagcaggaggagattgagcatctgaag
gatgatattgatgcatacaaaacccagaaccagtttctcaattccgagattcaccaggtt
actcgactctggacaagtgttgctgaaaatgaaaaagctctcctgatgaagtgtgcctgc
ctgcaagcaagaaactgccagatggagagcaaatacttgacagtcttgagaaagctgcag
gaggctgtgcctggcctgcccaattcgcatgctgaattggtgaagaacctcatccaggaa
gctctccagtgggatgtgaaggaagaagcggaagaaggttttaacttgaaccctgtaagt
gagtatgatgagtatgggtttatgactgtacctgactatgaaattgaggactggaaactc
ctggccaaaattcaagcccttgagatgaagtccaacaaactgcggagccaggaaatagtg
gagaagcccctccgtgacagatggaacagcattggagagctgaacccctgtgcagagctg
aagagtctgatccgaagtggcatcccagtggagcatcggcnnnnnnnnctgctggagcag
agcaggagcaccgagcacccggcctgccggcagattgagcttgacctgccccgcacactc
accaacaacaagcatttctcctctcccacctcccagcttatccccaggctccggagggtg
ttactggcattctcctggcacaatcctcccattggatactgccagggattgaacagattg
gcagctgttgctcttttggtcctagaagatgaggaaagtgctttctggtgtctagtttat
attgtggagaacctaatgccggcagattactacagtgaaacactaataacatcacaggta
gatcagagagtcttcaaagactttctgtcagagaagctgcctcgcctcatggctcatttt
gaacagtatcgcattgatgtctcactcatcaccttcaactggtttctggtggcctttgtg
gacagcctggtcagcgacatcctcctgcgagtgtgggatgccttcttgtatgagggaact
aaggtaattttccgctatgctcttgcgatttttaaatacaatgaggaggaaatcctaaga
attcatgacagtgtggagatctaccagtacctacgctttttcacgaggatgatcacggac
ggcaggaagctgatgaacattgccttcaatgacttaaaccccttccccatgaaactgctg
aggaaccgtcggtcaatgcacagagaagagctggaggcagagctgtgtgagcttgaacag
atcaaggcagcctatgtgaaagagagagcagagcagggacctcaggacctggaggaggtt
gttagtgaagaggaagaagagagttaa
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