Geospiza fortis (medium ground-finch): 102045226
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Entry
102045226 CDS
T03755
Symbol
USP19
Name
(RefSeq) ubiquitin specific peptidase 19
KO
K11847
ubiquitin carboxyl-terminal hydrolase 19 [EC:
3.4.19.12
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gfr01002
]
102045226 (USP19)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gfr04121
]
102045226 (USP19)
Enzymes [BR:
gfr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
102045226 (USP19)
Peptidases and inhibitors [BR:
gfr01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
102045226 (USP19)
Ubiquitin system [BR:
gfr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
102045226 (USP19)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
USP19_linker
UCH_1
CS
zf-MYND
MYND_ZMYND11_ZMYD8
USP7_C2
Motif
Other DBs
NCBI-GeneID:
102045226
NCBI-ProteinID:
XP_005420256
LinkDB
All DBs
Position
Un
AA seq
1434 aa
AA seq
DB search
MSSSTNAPGQRRASRGLDDATNKKKQKDRANQESKEVSRPELEQAETAQEKDSEEELLLD
WKQNADEIIIKLNLGTGALKAEDVHADFTDTDCVVKLPDGRQWSCQFYEEIEGSCSKIQC
KKGNFLQLVLQKKIPLHNWSSLLKKRKDGSKEVAKGAACWENGKEKAASAELTPEEPRAE
GTEPPRSRREPSNPKRAPGRSEVLGGKSPASPGTQSGPSAKRAVYLKVAPTEEEPNARVS
GSTEPSKGHGARAGSRRNGRASQADAPAALADLALPLEKAVVLAKETVPVEMPPLAATTE
VLPHRVATCVEKRVLQPGSPTEALRSRDCLPVLGESSKAIPVATLPMGRDGEKRDWSKDD
VALEAAADEPEPFVSLTFVKNDSYEKGNDLVVVHVYVKEIHKETSKVLFREQDFTLVFQT
SDMNFLRLHPGCGPHTVFRWQVKLRNLIEPDQCTYNFTVSRIDVCLKKRQSQRWGGLEAP
ATRGAVGGAKVAMPTGPTPLDKNPPGSNQHPLSSKEEARTSDKEKPRVEDGALDGVAART
APEHLAVKQEPHIPSPKPTCMVPPMTHSPVSAESVEDDEDEDEKKKVCLPGFTGLVNLGN
TCFMNSVIQSLSNTRELRDYFHDRSFESEINYNNPLGTGGRLAIGFAMLLRALWKGTHHA
FQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTETVDSDGRPDE
VVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPMCSKVSITFDPFLYLPVPLPQKQKVLT
VYYFAKEPHKKPIKFLVSISKENSSAMEVLDSVAHSVRVKPENLRLAEVIKNHFHRMFLP
SNSLDTVSPTDLLLCFEVLSPELAKERVVELQVQQRPQVPSGPVAKCAACQKKQLPEDEK
LKRCTRCYRVGYCNVACQKTHWPDHKASCRPENIGFPFLISVPESRLTYARLAQLLEGYA
RYSVSVFQPPFQLGRMSPEQGLQPLHSDKLEPLAKSSCAAATSAPELGDGDRVSSLPQEP
PLSPAVPELQPEMGDTTTVRSKVLTARSSLLSLDSGFSEHMESQGDSCCEKEPSYERALK
PEAAIPGYQHTPDLLSARATQFYITKIDAANREHKLEDKGDTPLDLTDDCSLALVWKNNE
RLKEFVLVESKELECVEDPGSASEAARAGHFTLEQCLNLFTKPEVLAPEEAWYCPKCKQH
REASKQLMLWRLPNVLIIQLKRFSFRSFIWRDKINDMVDFPVRSLDLSKFCIGRKGEQQL
PMYDLYAVINHYGGMIGGHYTAYARLPNDKNSQRSDVGWRLFDDSTVTTVDESQVVTRYA
YVLFYRRRNSPVERPLPGHPSDHRTERTPSAEAAASQASLIWQELEAEEQELQLEAPQRP
ARNSWRPCGQKRSPGTPQHPDEGCVRYFVLATTAAIVALFLNVFYPLIYQPRWR
NT seq
4305 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcagcacaaatgcccctggccagaggagagcgtctcggggcttggatgatgcc
accaacaagaagaagcaaaaggatcgagccaatcaggaaagcaaggaagtgtctcgccct
gagctcgagcaggctgagactgcccaggagaaggactcagaggaggagctgctgctggac
tggaagcagaatgccgatgagatcattatcaagttgaatttgggcactggagctctgaag
gcagaggatgtacatgctgatttcactgacacggactgtgtggtcaaactaccagacggg
cgccagtggagctgtcagttctatgaggagatcgagggctcctgcagcaagatccagtgc
aagaagggcaactttctacagcttgtgctgcagaagaagatcccactccataactggtct
tcacttctgaagaaaaggaaagacggatccaaagaagtggccaaaggggctgcgtgctgg
gagaacgggaaggagaaggctgcttctgcagagctgacccctgaagagccgagggctgaa
ggcacagagccaccaagatcccggcgggagccctccaaccccaagcgtgctccaggaaga
agcgaggtcctgggagggaaaagcccagccagcccagggacacagagtggccccagtgcc
aagcgggcagtgtacctcaaagtagctcccacggaagaggagccgaacgccagggtcagc
gggagcacagagcccagcaaggggcacggggcgagggccggcagccgccgcaacggcaga
gccagccaggctgatgcacctgcggcccttgcggacctcgcgctgccactcgagaaggct
gtggttttggccaaagagacggttcccgtggagatgccacctctcgcagctaccacagag
gtgctcccccaccgtgttgccacctgtgttgagaagagagtcctgcagccaggcagccct
actgaggccttgcggagccgggactgcctgcccgtcctgggagagagctcgaaggctatc
ccagtggccacccttcccatgggcagggatggtgagaagagggactggtccaaggacgac
gtggctctggaagcagcagctgatgagccagagccttttgtaagcctgacctttgtcaag
aatgactcatacgagaagggcaatgatctggtggtggtgcatgtctacgtgaaggagatc
cacaaggagacgtccaaagtgttgttccgggaacaagacttcacactagtgttccagacg
agtgatatgaacttccttcgtctccatcctggctgtgggccccacacggtgttccggtgg
caggtgaagctcaggaaccttattgagccggaccagtgcacgtacaacttcacggtgtct
cgcatcgatgtctgcctgaagaaacgccagagccagcgctggggggggctggaggctcca
gccacacgaggtgcagtgggtggtgcaaaggttgccatgcctacaggccctacccctctg
gataagaaccctccgggcagtaaccagcaccccctctccagcaaggaagaggcccgaacc
agtgacaaagagaagccacgtgtggaagatggggctctggatggtgtggcagcccgtaca
gccccagagcacttggcagtgaagcaagagccacacattccttcgcccaaaccaacatgt
atggtgccaccgatgacacacagcccggtgagtgccgagagcgtggaggacgacgaggat
gaggatgagaagaagaaggtctgcctgcctggcttcacaggtctggtgaacctgggcaac
acctgcttcatgaacagcgtcatccagtccctatccaacacacgggagctgcgtgactac
ttccatgatcggtcctttgagtcagaaatcaactataacaacccactggggacaggtgga
cgcctggccatcggctttgccatgctgctcagagcactgtggaagggcacacaccatgcc
ttccagccctctaaactgaaggcaattgtggccagcaaggccagccagttcactggctat
gcccagcatgatgctcaggagttcatggccttcctgcttgatggccttcatgaggacctc
aaccgcatccagaacaagccctacacagaaactgttgactctgatgggaggcctgatgag
gtggtagctgaggaggcttggcaacgacacaagatgaggaatgactcgttcatagtagac
ctcttccagggccagtacaaatccaagctcgtctgcccgatgtgctccaaggtgtctatt
acctttgaccccttcctgtacctccccgtgcccctcccacagaagcaaaaggtgctgact
gtctactactttgcaaaggagccacacaagaaacccatcaagttcctcgtgagtatcagc
aaggagaactccagtgccatggaggtgcttgactcagttgcccacagtgtgcgtgtgaaa
ccagagaacctgcgcctggcagaggtgatcaagaatcacttccaccgcatgttcctgccc
tctaactcactagacacagtctcgccaacggacctgctgctgtgctttgaggtgctgtcc
ccagagctggccaaggagcgtgtggtggagcttcaggtccagcagcgtccacaggtgccc
agtggccctgttgccaagtgtgcagcctgccagaagaagcagctgccagaggatgagaag
ctcaaacgctgcacgaggtgctatcgagttggttactgcaacgtggcgtgtcagaaaaca
cactggccagaccacaaggcttcgtgccgtcctgagaacatcggtttccccttcctcatc
agcgtgcccgagtcccgcctcacctatgcccgcctggcccagctgctggagggctacgcc
aggtactcagtcagcgtgttccagcctccgttccagttgggccggatgtcaccggagcag
gggctgcagcctctgcactcggacaagctggagcccctggccaagagcagctgtgcagca
gccacctctgcccccgagctgggtgatggggacagggtttccagcctccctcaggagccc
ccgctctccccagctgtgcctgagctacagccagagatgggggatactaccactgtccgg
agcaaggtcctgacagcgaggagttccctcttgagcttggattcagggttctctgagcac
atggagtcgcagggtgacagctgttgtgagaaggagccgtcctatgagagagccctcaag
ccagaagctgccatccctgggtaccaacacactccagacttactgagtgcccgcgccaca
cagttctacatcactaagatcgatgctgccaaccgagagcacaagctggaagataaaggt
gacacccccctggatctgacagacgactgctcccttgccctggtatggaagaacaatgag
cgcctcaaggaattcgtgttagtagaatccaaggagttggagtgtgtggaggatccaggc
tcagccagcgaagcagcccgggctggccactttaccctggagcagtgcctcaatctcttc
acgaagcctgaagtcctggccccagaggaagcgtggtactgccccaagtgcaagcagcac
cgtgaggcttccaagcagctgatgctgtggcggctgcccaacgtcctcatcatccagctc
aagcgcttctccttccgcagctttatttggagggacaagatcaatgacatggtggacttt
cctgtccggagtctggacctgagcaagttctgcattggtcggaaaggtgagcagcagctg
cctatgtatgacctctatgctgtgatcaaccactatggaggcatgattggaggacactac
acagcgtacgcccgcctgcccaatgacaagaacagccagcgcagcgacgtgggctggcgg
ctctttgacgacagcacagtcaccacagtggatgagagccaggtggtgaccagatacgcc
tatgtcctcttctaccgccggaggaactctcctgtggagagacctctgccagggcatccc
tcagaccaccgcaccgagcgcaccccctctgccgaagctgctgccagccaggcttctctg
atctggcaggaactggaggctgaagaacaagagctgcagcttgaggcaccccaaaggcct
gcaagaaactcttggaggccctgtggccagaagcgaagtccgggcaccccccagcaccca
gatgaaggctgcgtcagatactttgtcctggccaccacagctgcaattgtggctctcttc
ctgaacgtcttctacccactcatttaccagccccgctggagatag
DBGET
integrated database retrieval system
