Geospiza fortis (medium ground-finch): 102045293
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Entry
102045293 CDS
T03755
Symbol
LRRC8A
Name
(RefSeq) leucine rich repeat containing 8 family member A
KO
K22038
volume-regulated anion channel
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gfr04040
]
102045293 (LRRC8A)
Ion channels [BR:
gfr04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
102045293 (LRRC8A)
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GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_4
LRR_14
LRR_5
LRR_R13L1-DRL21
LRR_1
LRR_9
LRR_At5g56370
Sp-CxC
LRR_EndoS
BPD_transp_2
LRR_LRWD1
LRR_6
Motif
Other DBs
NCBI-GeneID:
102045293
NCBI-ProteinID:
XP_005421362
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All DBs
Position
Un
AA seq
791 aa
AA seq
DB search
MIPVTELRYFADTQPAYRILKPWWDVFTDYISIVMLMIAVFGGTLQVTQDKMICLPSPER
PYYNTSLVPSADSGPTGIRYDLDRHQYNYVDAVCYENRLHWFAKYFPYLVLLHTLIFLAC
SNFWFKFPRTSSKLEHFVSILLKCFDSPWTTRALSETVVEESDTKPAFGKMNGSMDKKSS
TVSEDVEATVPMLQRTKSRIEQGIVDRSETGVLDKKEGEQAKALFEKVKKFRTHVEEGDI
VYRLYMRQTIIKVIKFILIICYTVYYVNNITFDVDCKVDIESLTGYRMYRCAHPLATLFK
ILASFYISLVIFYGLICMYTLWWMLRRSLKKYSFESIREESSYSDIPDVKNDFAFMLHLI
DQYDPLYSKRFAVFLSEVSENKLRQLNLNNEWTLEKLRQRITKNSQDKLELHLFMLSGIH
DTVFDLIELEVLKLELIPDVTIPPSIAQLTSLKELWLYHTAAKIEAPALAFLRENLKSLH
IKFTDIKEIPLWIYSLKTLEELHLTGNLSAENNRYIVIDGLRELKRLKVLRMKSNLTKLP
QVVTDVGVHLQKLSINNEGTKLIVLNSLKKMVNLTELELIRCDLERIPHSIFSLHNLQEI
DLKDNNLKTIEEIISFQHLHRLTCLKLWYNHIAYIPMQIGNLTNLERLYLNRNKIEKIPT
QLFYCRKLRYLDLSHNNLTFIPPDVGLLQNLQNLAVTANRIESLPPELFQCRKLRTLNLG
NNVLQSLPSRVGELTNLSQIELRGNRLECLPVELGECPLLKRSGLVVEEDLFNTLPLEVK
ERLWRADKEQA
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgattccagtcactgagctgcgctactttgctgatactcagccagcctatcgcatcctg
aagccgtggtgggacgtcttcacggactacatttccatcgtgatgctgatgatcgccgtg
ttcggagggacgctccaggtcacccaggacaaaatgatttgtttgccctctccggagcgt
ccctactacaacaccagtcttgttccctctgctgattcggggcctacagggatccgatac
gatctggaccggcaccagtacaactatgtggatgcggtgtgttacgagaaccgtctacac
tggtttgccaagtattttccttatctggtgctgctacataccctcatctttctggcttgt
agcaacttctggttcaagttcccaaggaccagctccaagctggagcattttgtgtctatt
ttgcttaagtgttttgactctccgtggacaacgagagcattgtctgagacggtggtggaa
gagagtgataccaaaccagcatttggaaaaatgaatggctccatggacaagaaatcctcc
acggtcagtgaggatgtggaagccaccgttcccatgctgcagagaacaaagtctcgaatt
gagcaagggattgtggacaggtctgagactggtgtcttggacaaaaaggaaggtgagcaa
gccaaagcactctttgagaaagtgaaaaagttccgtactcatgtggaagagggagacata
gtttatcgcttgtacatgagacagaccataatcaaagtaatcaagttcattctgataatt
tgctatactgtgtactatgtcaacaacataacgtttgatgtagactgtaaagtggacatc
gagagcttgactggctacaggatgtaccgctgtgctcatcctttggccactctcttcaaa
atcttggcttctttctacatcagtctggtgattttctatggtttgatctgcatgtacaca
ctgtggtggatgttgaggcggtcactcaagaaatactcctttgagtccatccgggaggag
agcagttacagtgacattcctgatgtgaaaaatgactttgcttttatgctccatctgatt
gatcagtacgaccccctctactccaagcgctttgctgtctttctgtcagaggtgagtgag
aacaaattgcggcagctgaacctcaacaatgagtggactttggagaaactacgccagagg
atcaccaaaaactctcaggataagctggaattgcatcttttcatgttgagtggcattcat
gacacagtctttgacctcattgagttggaggtcttgaagctggagcttatccctgatgtc
actattccccccagcattgctcagctcaccagccttaaggaactgtggctctaccacaca
gctgccaaaatcgaggccccagcccttgccttcttgagggagaatttgaaatctctccac
atcaagttcacagacattaaggagattcctctttggatttatagcctgaagacactagaa
gagcttcacctaacagggaatttgagtgctgagaacaaccggtacattgtgatagatgga
ctgagggagctgaagaggctgaaggtgttgaggatgaagagtaacctcaccaaactgcca
caggtggtgacagatgttggtgtccatcttcagaagctttccatcaacaatgagggtacc
aagctcattgtcctcaacagccttaagaagatggtcaacctgacagagcttgagctgatc
cggtgtgacttggaacgcattcctcactctatctttagcctccacaatctgcaggaaata
gacctgaaggacaacaacttaaagactattgaggaaatcatcagcttccagcacttacat
cgtctcacttgccttaaattgtggtacaaccacattgcctacatccccatgcagataggc
aacctgaccaacttggaacgcctttacctgaaccgtaacaagatagaaaagatccctacc
cagctcttctattgccgaaaacttcggtacttggatctcagccacaacaacttaactttc
ataccaccagacgttggacttcttcaaaacctgcagaatctggctgtgacagccaacagg
attgagagtctcccaccagagctgttccagtgcaggaagctgagaaccttgaacctggga
aacaacgtgctgcagtcgctgccctcgcgggtgggagagctgaccaacctgtcgcagatc
gagctgcgggggaaccgcctggagtgcttgcccgtggagctgggagagtgcccgctgctc
aaacgcagtgggctcgtggtggaggaggacctgttcaacaccctgcccttggaagtcaaa
gagcgcctgtggagggcagacaaagagcaagcttga
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