Geospiza fortis (medium ground-finch): 102045305
Help
Entry
102045305 CDS
T03755
Symbol
PUS7
Name
(RefSeq) pseudouridylate synthase 7 (putative)
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gfr03016
]
102045305 (PUS7)
Enzymes [BR:
gfr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
102045305 (PUS7)
Transfer RNA biogenesis [BR:
gfr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
102045305 (PUS7)
Prokaryotic type
102045305 (PUS7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruD
PUS7L_N
R3H
Motif
Other DBs
NCBI-GeneID:
102045305
NCBI-ProteinID:
XP_005423575
UniProt:
A0A6I9HLT0
LinkDB
All DBs
Position
Un
AA seq
645 aa
AA seq
DB search
METIEMNSVSLKRPRSEDDVASADEIKRQKILENCKAENDSGQSIETVTEQPEDTKSEII
ANEESEEQEEEELEESDEDGDPESFADMMKHGLTESDVGITKFVSSHKGFSGILKERYSD
FVVHEIGKDGRVSHLDDFSVPVDDEDPSEETFTVLSDEDKQRLEELQLFKNKETSVAIEV
IEDTKEKRTIIHQAVKSLFPGLETKTEDRDGKKYIIAYHAAGKKALANPRKHSWPKSRGS
YCHFVLYKENKDTMDAINVLSKFLRVKPNIFSYMGTKDKRAITVQEIAVLRITAQRLAHL
NKCLMNFKLGNFSYKNHPLKLGELQGNHFTVVLRNITGTDEQIEQAMHSLREIGFINYYG
MQRFGTTAVPTYQIGRAILQNNWNEVMDLILKPRPGAEKGYLVKCREEWAKTKDPAAALK
KLPVKRCVEGQLLRGLLKYGMKNIISAFGIIPRNNRLMYIHSYQSYVWNNMVSKRIEEYG
LRAVPGDLILKGATAVHIEEGDVDNYTIHDVVMPLPGFDVIYPKHKIGEAYKEMLVADNL
DINNMRHKIRDYSLSGAYRKIIIRPQNVNWEVVAYDDPKIPLFTTDLDKLEGKASPVLPT
DGKFRALKMEFSLPPSTYATMAIREVLKMDTSIKNQTQLNTTWLR
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggaaactatagaaatgaatagtgtatccttgaaacgtcctcgctctgaggatgatgtg
gccagtgcagatgaaattaaaaggcagaagatcttggagaactgtaaggcagagaacgac
tctgggcagagtattgagactgtaacagaacagcctgaggacacaaaaagtgaaataatc
gccaatgaggaaagtgaggagcaggaagaagaggaactagaggaaagtgatgaagatgga
gatccagagagctttgcagacatgatgaagcatggactgacagaaagtgatgttggcata
actaaatttgttagctctcacaaagggttttctggaatcttaaaagagagatactcagac
tttgttgtccatgaaataggcaaagatggacgtgtgagccatttagatgacttttctgtt
ccagtggatgatgaggacccatcagaagaaacatttacagttttgtcagatgaagacaag
cagcgtttagaggagctccagctttttaagaataaggaaactagtgttgccatagaggta
attgaggacaccaaagaaaaaagaaccatcatccatcaggctgtgaagtccttgtttcca
ggactggagactaaaacagaagatagagatggaaagaaatacattattgcttatcatgct
gctgggaaaaaagcattggcaaatccaagaaagcactcttggccaaaatctaggggaagc
tactgccattttgtactgtacaaggagaacaaggacactatggatgccatcaatgtcctg
tccaaatttttaagagtgaagccaaacatattttcctacatgggaactaaagataaaagg
gctataacagttcaagagatcgctgttctcagaatcactgcacaaagacttgcccatttg
aataaatgtttgatgaacttcaaattaggaaatttcagttacaagaaccatccactgaaa
ctgggagaactgcaggggaaccatttcactgttgttctcagaaacataacaggaactgat
gagcagatagagcaagcaatgcattcactcagggaaattggattcattaattactatgga
atgcaaagatttggaaccacagctgttcctacttatcaaattggcagagctattctacag
aacaactggaatgaagtaatggatttgatattaaaaccacgaccaggagctgaaaaggga
tacttagtcaaatgcagagaagaatgggcaaagactaaagatccagcagcagccctcaag
aaactacctgtaaaaaggtgcgtggaaggacagcttctacgtggactcttaaagtatgga
atgaagaacataatctctgcatttggcataataccaagaaataatcgtttaatgtatatt
catagctaccagagttatgtgtggaataatatggtgagcaagagaatagaagaatacggg
cttagagctgtaccaggagatctcatactcaaaggagccacagctgttcacattgaagaa
ggagatgttgataactacaccatccacgatgttgtgatgcctttgcctggatttgatgtt
atttatccaaagcataaaattggtgaggcctacaaggagatgctggtagctgacaacctt
gatatcaacaacatgaggcataaaatcagagattactcactttctggagcatacagaaaa
attatcattcggcctcagaatgtcaattgggaagttgttgcatatgatgatcctaaaatc
ccattatttactacggatctggataaactggaaggaaaagcatcaccagttctccctaca
gatggcaaattcagggcactaaagatggagttctcccttcccccatccacttacgctacc
atggcgattcgagaagttttgaaaatggacacaagcataaaaaaccagacacaactgaat
actacctggctgcgctga
DBGET
integrated database retrieval system
