Geospiza fortis (medium ground-finch): 102045309
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Entry
102045309 CDS
T03755
Symbol
DHX32
Name
(RefSeq) DEAH-box helicase 32 (putative)
KO
K18994
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 [EC:
5.6.2.6
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gfr03041
]
102045309 (DHX32)
Enzymes [BR:
gfr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
102045309 (DHX32)
Spliceosome [BR:
gfr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
102045309 (DHX32)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Motif
Other DBs
NCBI-GeneID:
102045309
NCBI-ProteinID:
XP_014163913
LinkDB
All DBs
Position
Un
AA seq
750 aa
AA seq
DB search
MEFLTSSLENHCFSELLDGSDGDEEEILVCGEDLELNPFDGLPYSSRYYRLMKEREELPI
WQEKSTFMETLLHNQIVIVSGDAKTGKSSQVPQWCAEHCLALQPRGAVVCTQVLPRAAVA
LALRVADQMELGVGHEVGYCVPFESCCGPETILRYCTDEMLQREMMSTPLLSCYSVIVLD
DVHQRTVATDALLGLLKGVLAARAELRLVLLTAPHMCSTLQGFCGSVPMLRVRGRHRAQA
VFSCSPHGDPFLPALRLLLEIHHAREKGDIVIFLASEQEIEKAFQMIRQEQPNLNPDLGE
LIPIPLYPTKQDLPPKLIQNKQKCCKKYRRKVLLTTSSGEPLIWTKNVTFVIDVGVETRK
VYNPRIRADSVLTQPISQSQAEVHKQILGMSPSGKIFCLYPEEFTHKEMKAEIPAKVQES
NLTSLVLFLKRMDIAGFAHCDFISSPAPESLMQALEDLDYLAALDNDGNLSEFGIIMSEF
PLDPQLSKSLLASCEFECVDEMLTIAAMVTAPSCFLHAPPGTEEIARSRWRRFSHPAGDH
FTLINVFNAFRAATASPTQPGKYLSREQWCCEYFLSCSALSMAEMIRAELVEIMKRIELP
ISEPDFGSEANLLSIKKALLSGYFMQIARDVDGSGNYLMLTHKQVAQLHPFSSYCNTRRI
PEWVLFHEFSISEGNSIRVVSEISPHLFAELVPQYYFSNLPPSESKDILQEVINHLAPVS
ATKEEEKTASDSKENEEFPQAHTEQRCVIQ
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggagtttttaacctcttctctagagaaccactgcttttcagaattactcgacggcagc
gacggggatgaagaggaaattcttgtctgtggagaagatttagagcttaatccttttgat
ggcttgccttactcctcccgttattacagactgatgaaagagagagaagagcttccaata
tggcaagaaaaaagtactttcatggaaactttgcttcataatcaaattgtgattgtgtca
ggagatgctaagactggcaagagctcccaggtccctcagtggtgtgccgagcactgcctg
gccctgcagccccgcggggccgtggtgtgcacgcaggtgctgccccgggccgccgtggcg
ctggccctgcgtgtggccgatcagatggagctcggcgtgggccatgaggtgggatactgc
gtgcccttcgagagctgctgtggccccgagaccatcctcaggtactgcacagatgagatg
ctgcagagggaaatgatgtccacgcccctcttgagctgctacagcgtcatcgtcttggac
gatgtgcaccaaaggactgtggccacagatgccctgcttggcctcctgaagggggtgttg
gcagccagagcagagctgaggctggtgctgctgactgccccccacatgtgcagcaccttg
cagggcttctgcggcagcgtccccatgctgcgcgtgcggggcaggcaccgcgcccaggcc
gtgttctcctgcagcccccacggggaccccttcctgcctgccctcaggctgctcctggag
atccaccacgccagggagaagggggacatcgtcatcttcctggcatctgagcaagaaatt
gaaaaagcttttcagatgatcagacaggaacaacccaatttaaacccagatcttggagaa
ctcatccccatccctttgtaccccacaaaacaagacctgcctcccaaactaattcaaaac
aaacagaaatgctgcaaaaaatacaggaggaaagtgctactcaccaccagctctggagaa
cctctgatctggactaaaaacgtgacttttgtcatcgatgttggtgtggagacaagaaag
gtgtacaatcctagaatcagagcagactctgttctaacccagcctatcagccaaagtcaa
gcagaggtgcataaacaaattctgggcatgtctccatcagggaaaatcttctgcttgtac
cctgaagaatttacacacaaggaaatgaaggcagaaattccagctaaagttcaggaatcc
aacctcaccagcttggtcctgttcctgaagaggatggacatagcaggctttgcacactgt
gacttcattagcagcccggctcctgaaagcctgatgcaggctttggaagatctggattat
ctggcagcactggacaatgatggaaacctctctgaatttgggattataatgtcagaattc
cccctggatcctcagctgtccaagtccctgctggcttcctgtgaatttgagtgtgtggat
gagatgctcaccattgcagccatggtcacagctcccagctgcttcctgcacgcccctcct
ggcacagaggagatcgctcggagccgctggcgccgcttctcccaccctgcaggagatcac
ttcaccctcatcaacgtcttcaacgccttcagggcagccactgccagccccacacagcca
ggcaagtacctcagcagggagcaatggtgctgtgagtatttcctgagctgctctgctctg
agcatggcagagatgatcagagccgagctggtggagatcatgaagcgcattgaacttccc
atctcagaaccagactttggatcagaagcaaatctgctaagcattaagaaagctctttta
tctggttacttcatgcaaattgctcgtgatgtggatggctcagggaactatttaatgtta
acacacaaacaagtggcccagctccaccccttctcatcctattgcaacaccaggaggatt
ccagagtgggttttattccatgagttcagcatctcagagggcaattccatcagagttgtc
tcagagatctcccctcatctatttgcagagctggtacctcagtattatttcagcaatctt
cctccaagtgaaagcaaggatattctgcaggaagtgatcaatcacttggcacctgtttca
gccacaaaggaggaagagaaaactgccagtgacagcaaagaaaatgaggaatttccccaa
gctcacactgagcagagatgtgttattcagtga
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