Geospiza fortis (medium ground-finch): 102045329
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Entry
102045329 CDS
T03755
Symbol
VPS45
Name
(RefSeq) vacuolar protein sorting 45 homolog
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102045329 (VPS45)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gfr04131
]
102045329 (VPS45)
Membrane trafficking [BR:
gfr04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
102045329 (VPS45)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec1
B12-binding
Motif
Other DBs
NCBI-GeneID:
102045329
NCBI-ProteinID:
XP_005430369
LinkDB
All DBs
Position
Un
AA seq
453 aa
AA seq
DB search
MNAVLAVRQYPHVFSLNLLGCCRGRSWDPAQLTRTTQGLTALLLSLKKCPMIRYQLSSEP
AKRLAECVKQVITKEYELFDFRRTEVPPLLLILDRSDDACLPFPWQWTYQAMVHELLGIN
NNRIDLSRVPGISKDLREVVLSAENDEFYANNMYLNFAEIGTNIKNLMEDFQRRKPKEQQ
KLESIADMKAFVENYPQFKKMSGTVSKHVTVVGELSRLVAERNLLEVSEVEQELACQSDH
SSALQSVRRLLQSPRLSELDAARLVLHVWFHWDHLHGSLSPXGVCTSPQPGGGARLMGLC
PVPAQLVSAVVEYGGKRVRGSDLFSPKDAVAITKQFLKGLKGIENVYTQHQPLLQETLDQ
LIKGKLKDSQYPYLGPNTLRDRPQDIIVFLIGGATYEEALAVFNLTRSNPGVRIVLGGTT
IHNTRSFLEEVTAAGFRGRSTESSQVPPRSSRR
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcggtgctggcggtccggcagtacccacacgtcttctccctgaacctgctgggc
tgctgtcggggccgcagctgggacccggctcagctcaccaggacaacccaggggctcact
gctctgctcctgtccctgaagaagtgccccatgatccgctaccagctctcctcagagcca
gcaaagcgcttggccgagtgtgtgaagcaagtgatcacaaaggagtacgagctgtttgat
ttccggcgcaccgaggtccctcccctgctcctcatcctggaccgctcggacgatgcttgc
ctccctttcccctggcagtggacgtaccaggccatggtccacgagctgctgggcatcaac
aacaaccgcatcgacctgtcccgcgtgccggggatcagcaaggacctgcgcgaggtcgtc
ctgtcagctgagaacgatgagttctatgccaataacatgtacctgaacttcgctgagatt
ggcaccaacatcaagaacctgatggaggatttccagaggaggaagccaaaggagcagcag
aagctggagtccatagcagatatgaaggcctttgtggagaactaccctcagttcaagaag
atgtcaggcacagtgtccaagcacgtgacagtggtgggggagctgtcccggctcgtggcc
gagcggaacctgctggaggtgtccgaggtggagcaggagctggcctgccagagtgaccac
tccagtgccctccagagcgtgcggcggctgctgcagagcccgcggctgtcggagctggac
gcggcgcggttggtgctccatgtgtggttccattgggatcatctccatggctccttgtcc
ccatgaggtgtctgcacctcaccacagcctggagggggtgccaggctgatggggctgtgc
cctgtccctgcacagctggtgtctgccgtggtggagtacggagggaagcgggtgcgaggc
agtgacctgttcagccccaaggacgccgtggccatcaccaagcagttcctcaaaggcctg
aagggcattgagaatgtgtacacccagcaccagcccctgctccaggaaaccctggaccag
ctcatcaaggggaagctcaaggacagccaatatccctacctgggccccaacacactccgg
gacagacctcaggacatcattgtgttcctcattggaggggccacctacgaggaggctctg
gctgtgttcaacctgacccgctccaaccccggcgtccgcatcgtcctggggggcaccacc
atccacaacaccaggagcttcctggaggaggtcacagccgcaggattccgcggtcgaagc
actgagagctcccaagtcccaccaaggtccagcagacggtga
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