KEGG   Geospiza fortis (medium ground-finch): 102045394
Entry
102045394         CDS       T03755                                 
Symbol
CUL4A
Name
(RefSeq) cullin 4A
  KO
K10609  cullin 4
Organism
gfr  Geospiza fortis (medium ground-finch)
Pathway
gfr03420  Nucleotide excision repair
gfr04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:gfr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    102045394 (CUL4A)
  09124 Replication and repair
   03420 Nucleotide excision repair
    102045394 (CUL4A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gfr04121]
    102045394 (CUL4A)
   03400 DNA repair and recombination proteins [BR:gfr03400]
    102045394 (CUL4A)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gfr04147]
    102045394 (CUL4A)
Ubiquitin system [BR:gfr04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     102045394 (CUL4A)
DNA repair and recombination proteins [BR:gfr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      102045394 (CUL4A)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      102045394 (CUL4A)
Exosome [BR:gfr04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   102045394 (CUL4A)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 ADH_zinc_N
Other DBs
NCBI-GeneID: 102045394
NCBI-ProteinID: XP_014162092
LinkDB
Position
Un
AA seq 632 aa
MEQLCLMAGKDHLQNLASKETNKLVFLNGCYTDSLDSLLFLKKINKCWQDHCRQMIMIRS
IFLFLDRTYVLQNSVLPSIWDMGLELFRNHIISDKQVQTKTIDGILLLIERERNGEAVDR
SLLRSLLSMLSDLQVYKESFEQRFLEETNCLYAAEGQRLMQEREVPEYLHHVNKRLEEEA
DRVITYLDHSTQKPLIACVEKQLLGEHLSAILQKGLDSLLDENRISDLTQTYQLFSRVKG
GQQILLQHWSEYIKNFGTTIVVNPEKDKDMVQELLDFKDKVDHIIEVCFQKNEKFINLMK
ESFETFINKRPNKPAELIAKYVDSKLRAGNKEATDEELERILDKIMIIFRFIHGKDVFEA
FYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDVMVQFKQM
IKLQEVFKTFYLGKHSGRKLQWQTTLGHAVLKAEFKEGKKEFQVSLFQTLVLLMFNEGDE
FSFEEIKMATGVEDSELRRTLQSLACGKARVLIKNPKGKDVEDGDKFIFNGDFKHKLFRI
KINQIQMKETVEEQVSTTERVFQDRQYQIDAAIVRIMKMRKTLGHNLLVSELYNQLKFPV
KPGDLKKRIESLIDRDYMERDKDNPNQYHYVA
NT seq 1899 nt   +upstreamnt  +downstreamnt
atggagcagctttgcctaatggctggcaaagatcatctccagaatctggcctctaaagaa
accaacaaactagttttccttaatgggtgctatacagattctctggatagtcttttattt
ttaaagaagataaataaatgctggcaagatcattgcagacaaatgatcatgatcagaagc
attttcttatttttggatcgtacatatgtgcttcagaattcagtgcttccttctatatgg
gatatggggctagagttatttagaaaccatatcattagtgacaagcaagttcaaaccaag
actattgatggaattctcctgctgattgagcgagaacgaaatggtgaagctgtggacaga
agcttgctgcggagtttgttgagcatgctctcggatctgcaggtttacaaggaatcattt
gaacagaggtttctggaagagacaaattgtttatatgctgcagaaggccaaagattaatg
caagaaagagaggtcccagaatatcttcaccatgttaataaacgtttggaagaagaagca
gacagagttataacatatttagatcacagcacacagaaaccactgattgcttgtgtggag
aagcagctactaggagaacacttatcagctattttgcaaaaaggacttgatagcctgctt
gatgaaaatagaatatcagatttgacccagacataccagctgttcagccgggtaaaaggt
gggcagcagatccttttgcagcactggagtgaatacatcaagaactttgggacaacaata
gtggttaatcctgaaaaagacaaggatatggtgcaagagctactagattttaaggataaa
gtggaccatatcatagaagtgtgctttcagaaaaatgaaaaatttataaacttgatgaag
gagtcctttgaaacatttatcaacaagagaccaaataagcctgcagaattgatagcaaaa
tatgtggattccaagttaagagctggtaataaagaagcaactgatgaagagctggaaaga
atccttgacaaaataatgatcatatttagattcattcatgggaaagatgtgtttgaggca
ttttataagaaagacttagccaaaagactgctggttggaaaaagtgcttcagtagatgct
gagaagtcaatgttgtcaaagcttaaacatgaatgtggtgctgcttttaccagcaaactg
gagggcatgttcaaggacatggaactgtccaaagatgtcatggtacagttcaagcagatg
ataaagcttcaagaggtatttaaaaccttttacctgggaaaacacagtggtcgaaagctt
cagtggcagactactttaggacatgctgtcctaaaggcagaatttaaggaagggaagaag
gagtttcaagtatcgctctttcagacattagtattgcttatgtttaatgaaggagatgaa
ttcagttttgaagaaattaaaatggctaccggtgtagaggacagtgaattaagaagaacc
ttgcaatctttagcttgtggaaaagcaagagtattgattaaaaatccaaagggcaaggat
gtagaagatggagataaattcatttttaatggtgatttcaagcataagctgtttagaata
aagatcaaccagattcaaatgaaagaaacagttgaggaacaggtcagcacaactgaaaga
gtatttcaggacaggcaatatcagattgatgctgctattgtacggataatgaagatgagg
aagactcttggtcataatcttcttgtttctgaattgtataatcaactgaaatttcctgta
aagcctggagacttgaaaaagcgaattgaatctctcattgacagagactatatggagaga
gacaaagacaaccccaatcagtaccactatgttgcataa

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