Geospiza fortis (medium ground-finch): 102045399
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Entry
102045399 CDS
T03755
Symbol
THSD1
Name
(RefSeq) thrombospondin type 1 domain containing 1
KO
K24433
thrombospondin type-1 domain-containing protein 1
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gfr04990
]
102045399 (THSD1)
Domain-containing proteins not elsewhere classified [BR:
gfr04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
102045399 (THSD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
THSD1_D2
THSD1_D3
THSD1_N
TSP_1
TSP1_spondin
TSP1_ADAMTS
TSP1_CCN
AJAP1_PANP_C
TSP1_CFP_C
Motif
Other DBs
NCBI-GeneID:
102045399
NCBI-ProteinID:
XP_005420844
UniProt:
A0A6I9HHY0
LinkDB
All DBs
Position
Un
AA seq
852 aa
AA seq
DB search
MKHMLKDFSNLLLVVLCDYVLGEVEYLLLEHPDHVAFSNDTVSVEYQYYSGGNVTAEHVS
ILLLDASTSEIIARKQLPANQSQGMVVFECFHFKSAGDFLFSMVSPSDNSSAAQWSRSSM
STLHVEWPVFHIDLNRSSEVLGSSLQVGLFTNEQLCAMNRTVISLDVIFTNTLYEFRRVC
SDETLGIRTSKGIPLSRSQWVEFDCPPVSQEIYITVLLKSLETHSIIASIGPVDLLHKFG
YRLVVAAEDTCKTLVQVFVISPPCTSISGKVIVYKEALKHPNQRTTWLYENILHPGDNRT
EFNCTLFDVGKNKYCFDLLNFSNRSYFPARVKECILIQRNMETWSRWQPWSPCSVTCGDG
IRERFRECLSSSPAKPGCAGSPRETSLCSLEECVSVQPPTPPSVQPGEDQRANNIVTITG
ISLCLFIIFATVLITLWRKLCRAQKCSTAVRRNSVHSPGFRKNSDEENICQGNKQRDSFA
EGGDAPVNIPLTYRRSLQFAQEDDASGSENFQPNAQKIIPPIFSYRLAQQQLKEMKKKGL
TETTKVYHVSQNPLTDTVLGATTMLPLSGENQEEAAANKFRIKSPFLDQPASQSKFLGEG
SHPRLDFPFSQANPAMSPTQTLVRRGHFKHQDNRVDLPERGCHRNSQFRRTASFHETKKA
RPFRERSMSTLTPRQTPLYNSRTRTWDQGLEDRTRSKSRNANPACEKLDQPHGTVLGCEP
QGHGTKPYHRAGPPVRKLDLITDRQPAGQERAAEKPEPSRSKRGPLPNPKGLWRKETGPN
GKDNSQRGQSISPAQYRRDKCQSFPLDPEFAFYDNSTFGLTEAEQQMIDLPGYFGSNEED
ETSTLSIEKLVI
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgaaacatatgttgaaagatttttcaaatctattgttagtagtgctctgtgactacgtt
ctcggcgaagtggagtatctcctgttggagcacccggatcatgtagctttcagcaatgac
acagtgtctgtggaatatcagtactacagtggtggtaatgtgacagcagagcatgtgtcc
atccttttattggatgccagcaccagtgagataattgcaagaaaacagcttcctgcaaat
cagtcccaggggatggtggtgtttgagtgtttccatttcaagagtgctggtgatttcttg
ttcagtatggtctctcccagtgacaacagcagtgctgcccagtggagcagaagcagcatg
tccaccctccatgtggaatggcctgtatttcacattgatttgaacaggagttcagaggtg
cttggaagctctcttcaggttggactttttacaaatgagcagttatgtgccatgaacagg
actgtgatttcactggatgtgatattcaccaataccctttacgaattcagaagagtatgc
tctgatgagactctgggcattagaactagcaaaggaatccccctgtctaggtcccagtgg
gtagagtttgattgcccacctgtcagtcaagaaatatacatcactgtgttactgaaatca
ttagaaacacattccatcattgcctccataggacctgtagatctcctccacaagtttgga
tacagactagttgtggcagcagaagacacatgcaaaactttggttcaggtctttgtaatc
tctccaccatgcacttctatcagtggaaaagttattgtttataaagaggctctcaagcat
ccaaatcaaagaacaacttggctgtatgaaaacatccttcacccaggagacaacaggaca
gaatttaactgcactttgtttgatgtggggaagaacaaatactgctttgacctcctcaac
ttctcaaaccgaagctattttccagcaagagttaaggagtgtatactgatccaaaggaat
atggaaacgtggagccggtggcagccctggagcccatgcagtgtcacctgtggggacgga
atccgggagcgcttccgagagtgcctcagctcctcgccggcaaaaccaggctgtgctgga
tcgccgagggagacttccctgtgctcgctggaggagtgtgtgtctgtccagcctcccacc
ccaccttctgttcagccaggagaggaccagagagcaaataatatagttaccatcacgggt
atctcgctgtgcttgttcatcatctttgccactgttcttatcaccctctggaggaagctc
tgcagagctcagaagtgcagcactgctgtccggcgaaactccgtccattcccctggcttt
cggaaaaactcagatgaggagaacatttgccaaggcaacaagcaacgggacagctttgct
gaaggaggggatgctcctgttaacattcccctaacctacaggcgaagcctccaatttgcc
caagaagacgatgcctctggaagtgaaaactttcagccaaatgcccaaaaaataatccct
ccaattttcagctaccgcctggcacagcagcagctgaaggagatgaagaagaaaggcctg
acagagaccactaaggtgtaccatgtctctcagaatcctctcacagacacggttcttggt
gccaccaccatgcttcccctgagtggggaaaaccaagaggaggcagcagcaaacaaattt
cggatcaaatctccattcctggaccagccagccagtcagtccaagttcctgggagaaggc
tctcaccctagactggattttccattctcacaggccaatcctgcaatgagccctacccaa
accttggtaagaagaggtcatttcaagcaccaggataacagagtggacttgcctgagagg
ggctgtcacagaaactcgcagttcagaagaacagccagtttccatgaaactaaaaaggcc
aggcctttcagagagagaagcatgtccactctcacaccccgacagactcccctctacaac
tccaggaccaggacgtgggaccagggtctggaggacaggacacggtcaaaatcgagaaat
gctaatccagcttgtgaaaagctggatcagccccatggcactgtgctggggtgtgaacca
cagggccatggcacaaagccctaccacagggcaggtcccccagtgaggaagctggacctg
atcacagatcgccagcctgctggtcaggagagggcagctgagaagcctgagcccagccga
agtaagaggggccctttgcctaaccccaaaggtctgtggcggaaagaaaccggcccaaat
ggcaaagataattcccagagaggccaaagcatcagccctgcccagtatcgaagggacaag
tgccagagcttccccctggatcctgagtttgccttttatgacaattctacttttggctta
acggaggcggagcagcagatgatcgacctccctgggtattttggctcaaatgaagaagat
gaaacaagtactctgagcattgagaagctggtgatttga
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