Geospiza fortis (medium ground-finch): 102045562
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Entry
102045562 CDS
T03755
Symbol
LAMP1
Name
(RefSeq) lysosomal associated membrane protein 1
KO
K06528
lysosomal-associated membrane protein 1/2
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03272
Virion - Hepatitis viruses
gfr03273
Virion - Lassa virus and SFTS virus
gfr04140
Autophagy - animal
gfr04142
Lysosome
gfr04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
102045562 (LAMP1)
03272 Virion - Hepatitis viruses
102045562 (LAMP1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
102045562 (LAMP1)
04142 Lysosome
102045562 (LAMP1)
04140 Autophagy - animal
102045562 (LAMP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gfr04131
]
102045562 (LAMP1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gfr04147
]
102045562 (LAMP1)
04090 CD molecules [BR:
gfr04090
]
102045562 (LAMP1)
Membrane trafficking [BR:
gfr04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
102045562 (LAMP1)
Autophagy
Chaperone mediated autophagy (CMA)
Cargo receptors
102045562 (LAMP1)
Other autophagy associated proteins
RNautophagy/DNautophagy
102045562 (LAMP1)
Exosome [BR:
gfr04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
102045562 (LAMP1)
CD molecules [BR:
gfr04090
]
Proteins
102045562 (LAMP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lamp2-like_luminal
Lamp2_2nd
VAS1_LD
Motif
Other DBs
NCBI-GeneID:
102045562
NCBI-ProteinID:
XP_014162077
LinkDB
All DBs
Position
Un
AA seq
468 aa
AA seq
DB search
MLCCGGKAECWRHAGSNKLSQVWLKIVKWLLCAENTEAALNTMTGVYCMSFLSLRNQNVN
SFGLGFLQACSSFEVKDSSGKVCIIADLTVAFSVEYKTSVQKEFVHFFLPQNASVDSQSS
CGKDNASHPVLVLDFGAGHSLSLNFSESADKYQVEELVFHYNLSDATLFPNSTTGGVKTV
SHKSIMQAHVGTKYRCINSKHINMKNANVTFSNVTLEAYLTNGTFSVNKTECAEDMVSTT
TMAPTTPKQTTGQVPTAGPTPTSSPQNPTVGKYNVTGPNGTCVLAYMGLQLNITYPKKDE
KMGLDLLNFVPHNTTSSGRCDNTSASLNLTFEKTRVIFQFALNASAEKFFLQGVSVSTTL
PSEAKNPKFEASNNSMSDLRASVGNSYKCSSEETLQVSDQALLNVFNVQVQIFKIDGDKF
GPVEECQLDENNMLIPIIVGAALAGLVLIVLIAYLIGRKRSHAGYQTI
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgctgtggggggaaggcagagtgttggaggcatgcaggatcaaataagctaagc
caggtctggctgaagatagtaaaatggttgctgtgtgcagagaacactgaagctgccttg
aacactatgactggtgtttattgcatgtctttcttatctcttaggaaccagaatgtcaac
agttttggtttgggctttttacaggcttgctcttcatttgaagtgaaagattcaagtggt
aaggtctgcataattgctgatttgaccgtagccttctcagtggaatacaaaaccagtgtg
caaaaagagtttgtacacttttttcttccgcaaaatgcttcagtagactcacagagctca
tgtggtaaagataatgcatctcatccagttctggtattggattttggagcaggacattcg
ttaagcctgaatttctcagaatctgcagacaagtaccaagttgaagagttagttttccac
tacaatctgtcagatgcaactttattcccaaattcaactacaggaggtgtgaagactgta
tcacataaaagtatcatgcaggcacacgtgggcacaaaatacagatgcatcaactccaag
cacatcaatatgaagaatgcaaatgttacttttagcaatgtcactttggaagcctatctc
acaaatggcactttcagtgtgaacaagacagaatgtgctgaagatatggtctctactact
actatggcgcctacaactcctaaacagactactggccaggttcctacagctggcccaaca
ccaacatcatccccccaaaatcctacagttggtaaatacaatgtgactggtccaaatgga
acctgtgtactggcctacatgggcttacagcttaatatcacctatccaaaaaaagatgaa
aagatgggtttggatttgctgaatttcgtaccacataatacaacttcttctgggagatgt
gacaatacatctgcctcgttgaacctgacttttgagaaaacgagggttatcttccagttt
gccttgaatgcaagtgctgaaaaattcttcctgcaaggtgtgagtgtcagcacaaccctg
ccttctgaagcaaaaaatccaaaatttgaagcatcaaacaacagtatgagtgacctgaga
gcttcagtagggaactcctacaagtgcagttctgaggagactctgcaggtctcggaccaa
gcccttctcaatgtatttaatgttcaggtccagattttcaagattgatggagacaaattt
gggccagtggaagaatgtcaactggatgaaaataacatgctgatccctataatagttggt
gcagcccttgctggtcttgttctgattgtcttgattgcttacctgattggcagaaagagg
agccatgctggatatcaaacaatttaa
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integrated database retrieval system
